RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 C11orf86A6NJI1 115 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 ADARB2-AS1A8MUL3 147 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 SPATA3Q8NHX4 192 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 ZNF479Q96JC4 524 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE12BA1L429 117 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE7O76087 117 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 PRB2P02812 416 aaPredicted RBP8.07□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE12FP0CL80 117 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE12GP0CL81 117 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE12IP0CL82 117 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 C11orf72Q8NBR9 251 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 PMVKQ15126 192 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 POM121L12Q8N7R1 296 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 PRADC1Q9BSG0 188 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 CHAC1Q9BUX1 264 aa8.07□□□□□ -1.12
TCOF1-203ENST00000394269 IGIPA6NJ69 53 aa8.06□□□□□ -1.12
TCOF1-203ENST00000394269 IGLV1-51P01701 117 aa8.06□□□□□ -1.12
TCOF1-203ENST00000394269 HIST1H4GQ99525 98 aa8.06□□□□□ -1.12
TCOF1-203ENST00000394269 VCX2Q9H322 139 aa8.06□□□□□ -1.12
TCOF1-203ENST00000394269 CST9LQ9H4G1 147 aa8.06□□□□□ -1.12
TCOF1-203ENST00000394269 RRN3P1Q2M238 152 aa8.06□□□□□ -1.12
TCOF1-203ENST00000394269 AMMECR1LQ6DCA0 310 aa8.06□□□□□ -1.12
TCOF1-203ENST00000394269 TRAV12-1A0A0B4J245 112 aa8.05□□□□□ -1.12
TCOF1-203ENST00000394269 TRBV6-5A0A0K0K1A5 114 aa8.05□□□□□ -1.12
TCOF1-203ENST00000394269 K7ERJ3 54 aa8.05□□□□□ -1.12
TCOF1-203ENST00000394269 ZNF815PA8K554 130 aa8.05□□□□□ -1.12
TCOF1-203ENST00000394269 LINC00482Q8N8I6 264 aa8.05□□□□□ -1.12
TCOF1-203ENST00000394269 C20orf203Q8NBC4 194 aa8.05□□□□□ -1.12
TCOF1-203ENST00000394269 H3BUT2 72 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 DEFB130BP0DP73 79 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 DEFB130AP0DP74 79 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 HSD52Q0P140 79 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 NHP2Q9NX24 153 aaKnown RBP8.04□□□□□ -1.12
TCOF1-203ENST00000394269 PKD1L1Q8TDX9 2849 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 A0A0J9YXV3 536 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE12JA6NER3 117 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 FXYD2P54710 66 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE4Q13068 117 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE5Q13069 117 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 DGAT2L7PQ6IED9 249 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 SPXQ9BT56 116 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 A6NDN8 102 aa8.04□□□□□ -1.12
TCOF1-203ENST00000394269 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.12
TCOF1-203ENST00000394269 CLUHP3Q96NS8 147 aa8.03□□□□□ -1.12
TCOF1-203ENST00000394269 A8MTW9 85 aa8.03□□□□□ -1.12
TCOF1-203ENST00000394269 NDUFA7O95182 113 aa8.03□□□□□ -1.12
TCOF1-203ENST00000394269 DEFB4AO15263 64 aa8.03□□□□□ -1.12
TCOF1-203ENST00000394269 GIG44P09565 113 aaPredicted RBP8.03□□□□□ -1.12
TCOF1-203ENST00000394269 TMEM141Q96I45 108 aa8.03□□□□□ -1.12
TCOF1-203ENST00000394269 VPS25Q9BRG1 176 aa8.03□□□□□ -1.12
TCOF1-203ENST00000394269 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
TCOF1-203ENST00000394269 NDUFA11Q86Y39 141 aa8.02□□□□□ -1.13
TCOF1-203ENST00000394269 TIMM17AQ99595 171 aa8.02□□□□□ -1.13
TCOF1-203ENST00000394269 MYMXA0A1B0GTQ4 84 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 RHODO00212 210 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 HERVK_113P61574 105 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 RHOHQ15669 191 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.01□□□□□ -1.13
TCOF1-203ENST00000394269 RPL32P62910 135 aaKnown RBP8.01□□□□□ -1.13
TCOF1-203ENST00000394269 SEC11AP67812 179 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 TMEM263Q8WUH6 116 aaKnown RBP8.01□□□□□ -1.13
TCOF1-203ENST00000394269 LINC00467Q9BRT7 94 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 IGKV3OR2-268A0A0C4DH90 116 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 C3orf56Q8N813 242 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 PLEKHB2Q96CS7 222 aa8.01□□□□□ -1.13
TCOF1-203ENST00000394269 IGLV4-3A0A075B6K6 122 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 TRGV4A0A0C4DH28 118 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 LOC100131303A0A0U1RQF7 123 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 SIVA1O15304 175 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 SLC25A29Q8N8R3 303 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 C19orf73Q9NVV2 129 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 CRLF1O75462 422 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 RS1O15537 224 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 UFSP1Q6NVU6 142 aa8□□□□□ -1.13
TCOF1-203ENST00000394269 E9PLD3 99 aa7.99□□□□□ -1.13
TCOF1-203ENST00000394269 SMIM13P0DJ93 91 aa7.99□□□□□ -1.13
TCOF1-203ENST00000394269 CMC4P56277 68 aaPredicted RBP7.99□□□□□ -1.13
TCOF1-203ENST00000394269 BEAN1Q3B7T3 259 aa7.99□□□□□ -1.13
TCOF1-203ENST00000394269 LGALS3P17931 250 aaKnown RBP7.99□□□□□ -1.13
TCOF1-203ENST00000394269 RPL36AP83881 106 aaKnown RBP7.99□□□□□ -1.13
TCOF1-203ENST00000394269 RPL36ALQ969Q0 106 aaKnown RBP7.99□□□□□ -1.13
TCOF1-203ENST00000394269 C1QTNF4Q9BXJ3 329 aa7.99□□□□□ -1.13
TCOF1-203ENST00000394269 TRBV7-3A0A075B6L6 115 aa7.98□□□□□ -1.13
TCOF1-203ENST00000394269 TRAV8-3A0A0A6YYJ7 113 aa7.98□□□□□ -1.13
TCOF1-203ENST00000394269 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
TCOF1-203ENST00000394269 A8MZ25 164 aa7.98□□□□□ -1.13
TCOF1-203ENST00000394269 CEND1Q8N111 149 aa7.98□□□□□ -1.13
TCOF1-203ENST00000394269 TSPEAR-AS2P59090 65 aa7.98□□□□□ -1.13
TCOF1-203ENST00000394269 PAPPA-AS1Q5QFB9 102 aa7.98□□□□□ -1.13
TCOF1-203ENST00000394269 Q6ZUT4 128 aa7.98□□□□□ -1.13
TCOF1-203ENST00000394269 A0A096LPF7 62 aa7.97□□□□□ -1.13
TCOF1-203ENST00000394269 TRAV13-1A0A0B4J241 112 aa7.97□□□□□ -1.13
TCOF1-203ENST00000394269 LINC01549A6NIU2 74 aa7.97□□□□□ -1.13
TCOF1-203ENST00000394269 DEFB135Q30KP9 77 aa7.97□□□□□ -1.13
TCOF1-203ENST00000394269 CHCHD7Q9BUK0 85 aa7.97□□□□□ -1.13
TCOF1-203ENST00000394269 J3QQQ9 107 aa7.97□□□□□ -1.13
TCOF1-203ENST00000394269 K7EQD1 137 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms