RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 KIR2DL4Q99706 377 aa13.28□□□□□ -0.28
PSEN1-203ENST00000394157 TRBV25-1A0A075B6N4 114 aa13.27□□□□□ -0.29
PSEN1-203ENST00000394157 IGHV1-24A0A0C4DH33 117 aa13.27□□□□□ -0.29
PSEN1-203ENST00000394157 PKIAP61925 76 aa13.27□□□□□ -0.29
PSEN1-203ENST00000394157 NTM-AS1Q6ZSK4 140 aa13.26□□□□□ -0.29
PSEN1-203ENST00000394157 NXT2Q9NPJ8 142 aaKnown RBP13.26□□□□□ -0.29
PSEN1-203ENST00000394157 K7EMI3 77 aa13.25□□□□□ -0.29
PSEN1-203ENST00000394157 LY6G6CO95867 125 aa13.25□□□□□ -0.29
PSEN1-203ENST00000394157 SIVA1O15304 175 aa13.24□□□□□ -0.29
PSEN1-203ENST00000394157 TSHBP01222 138 aa13.24□□□□□ -0.29
PSEN1-203ENST00000394157 FCER1GP30273 86 aa13.24□□□□□ -0.29
PSEN1-203ENST00000394157 AMTP48728 403 aa13.24□□□□□ -0.29
PSEN1-203ENST00000394157 Q8N8P6 123 aa13.24□□□□□ -0.29
PSEN1-203ENST00000394157 LCE6AA0A183 80 aa13.23□□□□□ -0.29
PSEN1-203ENST00000394157 K7EP13 123 aa13.23□□□□□ -0.29
PSEN1-203ENST00000394157 TRGC2P03986 189 aa13.23□□□□□ -0.29
PSEN1-203ENST00000394157 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
PSEN1-203ENST00000394157 CHCHD7Q9BUK0 85 aa13.23□□□□□ -0.29
PSEN1-203ENST00000394157 Q9H8V8 135 aa13.23□□□□□ -0.29
PSEN1-203ENST00000394157 IGLV2-18A0A075B6J9 118 aa13.22□□□□□ -0.29
PSEN1-203ENST00000394157 LOC389332A0A1B0GUA5 103 aa13.22□□□□□ -0.29
PSEN1-203ENST00000394157 H7C423 109 aa13.22□□□□□ -0.29
PSEN1-203ENST00000394157 CHCHD5Q9BSY4 110 aa13.22□□□□□ -0.29
PSEN1-203ENST00000394157 DNAH10OSP0CZ25 163 aa13.21□□□□□ -0.29
PSEN1-203ENST00000394157 WFDC10BQ8IUB3 73 aa13.21□□□□□ -0.29
PSEN1-203ENST00000394157 ESDP10768 282 aa13.2□□□□□ -0.3
PSEN1-203ENST00000394157 LINC01556Q5JQF7 62 aa13.2□□□□□ -0.3
PSEN1-203ENST00000394157 NIT1Q86X76 327 aa13.2□□□□□ -0.3
PSEN1-203ENST00000394157 PRSS3P2Q8NHM4 247 aa13.2□□□□□ -0.3
PSEN1-203ENST00000394157 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
PSEN1-203ENST00000394157 TRAV9-2A0A087WT02 112 aa13.19□□□□□ -0.3
PSEN1-203ENST00000394157 UBE2L6O14933 153 aa13.19□□□□□ -0.3
PSEN1-203ENST00000394157 IFI27P40305 119 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-203ENST00000394157 ORMDL2Q53FV1 153 aa13.19□□□□□ -0.3
PSEN1-203ENST00000394157 TMEM18Q96B42 140 aa13.19□□□□□ -0.3
PSEN1-203ENST00000394157 ALMS1Q8TCU4 4167 aa13.18□□□□□ -0.3
PSEN1-203ENST00000394157 A0A087WX48 190 aa13.18□□□□□ -0.3
PSEN1-203ENST00000394157 SMAGPQ0VAQ4 97 aa13.18□□□□□ -0.3
PSEN1-203ENST00000394157 TTC32Q5I0X7 151 aa13.18□□□□□ -0.3
PSEN1-203ENST00000394157 LINC01546A6NGU7 62 aa13.17□□□□□ -0.3
PSEN1-203ENST00000394157 TMEM262E9PQX1 116 aa13.17□□□□□ -0.3
PSEN1-203ENST00000394157 G0S2P27469 103 aa13.17□□□□□ -0.3
PSEN1-203ENST00000394157 RAB5BP61020 215 aa13.17□□□□□ -0.3
PSEN1-203ENST00000394157 LAGE3Q14657 143 aa13.17□□□□□ -0.3
PSEN1-203ENST00000394157 C10orf126Q8N4M7 172 aa13.17□□□□□ -0.3
PSEN1-203ENST00000394157 DEFB104AQ8WTQ1 72 aa13.17□□□□□ -0.3
PSEN1-203ENST00000394157 LYSTQ99698 3801 aa13.17□□□□□ -0.3
PSEN1-203ENST00000394157 VPS13DQ5THJ4 4388 aa13.16□□□□□ -0.3
PSEN1-203ENST00000394157 A0A1B0GUV1 79 aa13.16□□□□□ -0.3
PSEN1-203ENST00000394157 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
PSEN1-203ENST00000394157 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
PSEN1-203ENST00000394157 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-203ENST00000394157 LORP23490 312 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-203ENST00000394157 Q0VG73 95 aa13.15□□□□□ -0.3
PSEN1-203ENST00000394157 GAGE6Q13070 117 aa13.15□□□□□ -0.3
PSEN1-203ENST00000394157 NBDYA0A0U1RRE5 68 aa13.14□□□□□ -0.31
PSEN1-203ENST00000394157 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-203ENST00000394157 IGKV2-29A2NJV5 120 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-203ENST00000394157 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
PSEN1-203ENST00000394157 LINC00614P0C842 121 aa13.13□□□□□ -0.31
PSEN1-203ENST00000394157 AMMECR1LQ6DCA0 310 aa13.13□□□□□ -0.31
PSEN1-203ENST00000394157 MRPL52Q86TS9 123 aaKnown RBP13.13□□□□□ -0.31
PSEN1-203ENST00000394157 TIMM21Q9BVV7 248 aa13.13□□□□□ -0.31
PSEN1-203ENST00000394157 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
PSEN1-203ENST00000394157 DNAH1Q9P2D7 4330 aa13.12□□□□□ -0.31
PSEN1-203ENST00000394157 FGF6P10767 208 aa13.12□□□□□ -0.31
PSEN1-203ENST00000394157 BTF3P20290 206 aaKnown RBP13.12□□□□□ -0.31
PSEN1-203ENST00000394157 RBX1P62877 108 aa13.12□□□□□ -0.31
PSEN1-203ENST00000394157 MPV17L2Q567V2 206 aa13.12□□□□□ -0.31
PSEN1-203ENST00000394157 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
PSEN1-203ENST00000394157 IGHV3-30P01768 117 aa13.11□□□□□ -0.31
PSEN1-203ENST00000394157 IGHV3-33P01772 117 aa13.11□□□□□ -0.31
PSEN1-203ENST00000394157 IGHV3-30-3P0DP02 117 aa13.11□□□□□ -0.31
PSEN1-203ENST00000394157 IGHV3-30-5P0DP03 117 aa13.11□□□□□ -0.31
PSEN1-203ENST00000394157 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
PSEN1-203ENST00000394157 CHCHD1Q96BP2 118 aaKnown RBP13.11□□□□□ -0.31
PSEN1-203ENST00000394157 TMEM101Q96IK0 257 aa13.11□□□□□ -0.31
PSEN1-203ENST00000394157 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
PSEN1-203ENST00000394157 RNASEKQ6P5S7 137 aaKnown RBP13.1□□□□□ -0.31
PSEN1-203ENST00000394157 Q6ZR54 194 aa13.1□□□□□ -0.31
PSEN1-203ENST00000394157 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
PSEN1-203ENST00000394157 CYSLTR1Q9Y271 337 aa13.1□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BKO60814 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BJP06899 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BOP23527 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BBP33778 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BDP58876 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BCP62807 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST2H2BEQ16778 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.09□□□□□ -0.31
PSEN1-203ENST00000394157 C2orf66Q6UXQ4 117 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 Q8N976 141 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BHQ93079 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 URB1-AS1Q96HZ7 61 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BNQ99877 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 HIST1H2BMQ99879 126 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 UBE2D4Q9Y2X8 147 aa13.09□□□□□ -0.31
PSEN1-203ENST00000394157 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
PSEN1-203ENST00000394157 DGAT2L7PQ6IED9 249 aa13.08□□□□□ -0.32
PSEN1-203ENST00000394157 OR5A1Q8NGJ0 315 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms