RNA–Protein interactions for RNA: ENST00000393637.5

FGFR4-202, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FGFR4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-202ENST00000393637 VCX2Q9H322 139 aa12.9□□□□□ -0.34
FGFR4-202ENST00000393637 A0A0J9YY99 117 aa12.89□□□□□ -0.35
FGFR4-202ENST00000393637 H3BMG7 143 aa12.89□□□□□ -0.35
FGFR4-202ENST00000393637 INSP01308 110 aa12.89□□□□□ -0.35
FGFR4-202ENST00000393637 NOTCH2Q04721 2471 aa12.89□□□□□ -0.35
FGFR4-202ENST00000393637 TRAV2A0A0B4J234 112 aa12.89□□□□□ -0.35
FGFR4-202ENST00000393637 A8MWV9 139 aa12.89□□□□□ -0.35
FGFR4-202ENST00000393637 J3QQQ9 107 aa12.89□□□□□ -0.35
FGFR4-202ENST00000393637 YAE1D1Q9NRH1 226 aa12.89□□□□□ -0.35
FGFR4-202ENST00000393637 APOMO95445 188 aa12.88□□□□□ -0.35
FGFR4-202ENST00000393637 STHQ8IWL8 128 aa12.88□□□□□ -0.35
FGFR4-202ENST00000393637 TMEM86BQ8N661 226 aa12.88□□□□□ -0.35
FGFR4-202ENST00000393637 FAM104AQ969W3 186 aa12.88□□□□□ -0.35
FGFR4-202ENST00000393637 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.88□□□□□ -0.35
FGFR4-202ENST00000393637 IGKV2-29A2NJV5 120 aaPredicted RBP12.88□□□□□ -0.35
FGFR4-202ENST00000393637 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
FGFR4-202ENST00000393637 LGALS3P17931 250 aaKnown RBP12.87□□□□□ -0.35
FGFR4-202ENST00000393637 RRN3P1Q2M238 152 aa12.87□□□□□ -0.35
FGFR4-202ENST00000393637 K7ERU9 68 aa12.87□□□□□ -0.35
FGFR4-202ENST00000393637 ZNF22P17026 224 aaPredicted RBP12.87□□□□□ -0.35
FGFR4-202ENST00000393637 AMELXQ99217 191 aa12.87□□□□□ -0.35
FGFR4-202ENST00000393637 SPXQ9BT56 116 aa12.87□□□□□ -0.35
FGFR4-202ENST00000393637 HECTD1Q9ULT8 2610 aa12.86□□□□□ -0.35
FGFR4-202ENST00000393637 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
FGFR4-202ENST00000393637 WFDC10AQ9H1F0 79 aa12.86□□□□□ -0.35
FGFR4-202ENST00000393637 TMEM223A0PJW6 202 aa12.86□□□□□ -0.35
FGFR4-202ENST00000393637 ADARB2-AS1A8MUL3 147 aa12.86□□□□□ -0.35
FGFR4-202ENST00000393637 RHODO00212 210 aa12.86□□□□□ -0.35
FGFR4-202ENST00000393637 KRTAP1-1Q07627 177 aa12.86□□□□□ -0.35
FGFR4-202ENST00000393637 RPL24P83731 157 aaKnown RBP12.85□□□□□ -0.35
FGFR4-202ENST00000393637 C1orf158Q8N1D5 194 aa12.85□□□□□ -0.35
FGFR4-202ENST00000393637 A0A1B0GWB2 263 aa12.84□□□□□ -0.35
FGFR4-202ENST00000393637 FHL3Q13643 280 aa12.84□□□□□ -0.35
FGFR4-202ENST00000393637 LINC01006Q8NI28 216 aa12.84□□□□□ -0.35
FGFR4-202ENST00000393637 IGHV3-53P01767 116 aa12.84□□□□□ -0.35
FGFR4-202ENST00000393637 GCN1Q92616 2671 aaKnown RBP12.84□□□□□ -0.35
FGFR4-202ENST00000393637 TRGV1A0A0A0MS02 117 aa12.83□□□□□ -0.35
FGFR4-202ENST00000393637 WFDC2Q14508 124 aa12.83□□□□□ -0.35
FGFR4-202ENST00000393637 LINC00467Q9BRT7 94 aa12.83□□□□□ -0.35
FGFR4-202ENST00000393637 CHCHD7Q9BUK0 85 aa12.83□□□□□ -0.35
FGFR4-202ENST00000393637 TRAV8-3A0A0A6YYJ7 113 aa12.83□□□□□ -0.36
FGFR4-202ENST00000393637 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
FGFR4-202ENST00000393637 IGHV3-30-5P0DP03 117 aa12.82□□□□□ -0.36
FGFR4-202ENST00000393637 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
FGFR4-202ENST00000393637 EDA2RQ9HAV5 297 aa12.82□□□□□ -0.36
FGFR4-202ENST00000393637 TMEM238LA0A1B0GVL6 79 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 A6NJY4 79 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 A8MZ25 164 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 VWFP04275 2813 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 LOC107984156A0A0G2JMH3 177 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 TEX48A0A1B0GUV7 120 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 LEPROTO15243 131 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 UBE2D1P51668 147 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 ARL17AQ8IVW1 177 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 SMR3AQ99954 134 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 FN1P02751 2386 aaKnown RBP12.81□□□□□ -0.36
FGFR4-202ENST00000393637 NBEAL2Q6ZNJ1 2754 aa12.81□□□□□ -0.36
FGFR4-202ENST00000393637 HIVEP2P31629 2446 aa12.8□□□□□ -0.36
FGFR4-202ENST00000393637 TSPAN13O95857 204 aa12.8□□□□□ -0.36
FGFR4-202ENST00000393637 UBE2D4Q9Y2X8 147 aa12.8□□□□□ -0.36
FGFR4-202ENST00000393637 Q6ZTI0 123 aa12.8□□□□□ -0.36
FGFR4-202ENST00000393637 Q6ZUT4 128 aa12.8□□□□□ -0.36
FGFR4-202ENST00000393637 G3V4G9 280 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 BEAN1Q3B7T3 259 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 PYGO1Q9Y3Y4 419 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 TSSC4Q9Y5U2 329 aaPredicted RBP12.79□□□□□ -0.36
FGFR4-202ENST00000393637 RS1O15537 224 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 CFC1BP0CG36 223 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 CFC1P0CG37 223 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 COTL1Q14019 142 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 NDUFA11Q86Y39 141 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 C10orf126Q8N4M7 172 aa12.79□□□□□ -0.36
FGFR4-202ENST00000393637 IGHV3-30-3P0DP02 117 aa12.78□□□□□ -0.36
FGFR4-202ENST00000393637 RPL35AP18077 110 aaKnown RBP12.78□□□□□ -0.36
FGFR4-202ENST00000393637 TRAV25A0A0B4J276 109 aa12.78□□□□□ -0.36
FGFR4-202ENST00000393637 TEX29Q8N6K0 151 aa12.78□□□□□ -0.36
FGFR4-202ENST00000393637 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
FGFR4-202ENST00000393637 TIMM21Q9BVV7 248 aa12.77□□□□□ -0.37
FGFR4-202ENST00000393637 SPINK8P0C7L1 97 aa12.77□□□□□ -0.37
FGFR4-202ENST00000393637 ETDBQ3ZM63 59 aa12.77□□□□□ -0.37
FGFR4-202ENST00000393637 PIK3CD-AS1Q5SR53 167 aa12.77□□□□□ -0.37
FGFR4-202ENST00000393637 NOP10Q9NPE3 64 aaKnown RBP12.77□□□□□ -0.37
FGFR4-202ENST00000393637 SPANXB1Q9NS25 103 aaPredicted RBP12.77□□□□□ -0.37
FGFR4-202ENST00000393637 KMT2BQ9UMN6 2715 aaPredicted RBP12.77□□□□□ -0.37
FGFR4-202ENST00000393637 PSMB2P49721 201 aa12.76□□□□□ -0.37
FGFR4-202ENST00000393637 MRPS36P82909 103 aaKnown RBP12.76□□□□□ -0.37
FGFR4-202ENST00000393637 GAGE13Q4V321 117 aa12.76□□□□□ -0.37
FGFR4-202ENST00000393637 A4D1N5 150 aa12.75□□□□□ -0.37
FGFR4-202ENST00000393637 H7C2G1 150 aa12.75□□□□□ -0.37
FGFR4-202ENST00000393637 PTH2Q96A98 100 aa12.75□□□□□ -0.37
FGFR4-202ENST00000393637 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
FGFR4-202ENST00000393637 F8W1H4 67 aa12.74□□□□□ -0.37
FGFR4-202ENST00000393637 RNASE1P07998 156 aaKnown RBP12.74□□□□□ -0.37
FGFR4-202ENST00000393637 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
FGFR4-202ENST00000393637 MUSTN1Q8IVN3 82 aa12.74□□□□□ -0.37
FGFR4-202ENST00000393637 EIF4EBP3O60516 100 aaPredicted RBP12.74□□□□□ -0.37
FGFR4-202ENST00000393637 NDUFA7O95182 113 aa12.74□□□□□ -0.37
FGFR4-202ENST00000393637 A0A0J9YXY3 114 aa12.73□□□□□ -0.37
FGFR4-202ENST00000393637 LINC00694P0DN24 101 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1985.9 ms