RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 COTL1Q14019 142 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 FHL2Q14192 279 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 ERASQ7Z444 233 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 RETNQ9HD89 108 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 DKK2Q9UBU2 259 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 TRBV6-4A0A1B0GX49 114 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 LINC01549A6NIU2 74 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 DAD1P61803 113 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 LINC00612Q8N6U2 182 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 Q8NAQ8 132 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 PRADC1Q9BSG0 188 aa6.13□□□□□ -1.43
TDP1-203ENST00000393454 LOC100131303A0A0U1RQF7 123 aa6.12□□□□□ -1.43
TDP1-203ENST00000393454 hDV102S1A0JD36 115 aa6.12□□□□□ -1.43
TDP1-203ENST00000393454 C20orf203Q8NBC4 194 aa6.12□□□□□ -1.43
TDP1-203ENST00000393454 HHLA3Q9XRX5 114 aa6.12□□□□□ -1.43
TDP1-203ENST00000393454 ANK2Q01484 3957 aa6.12□□□□□ -1.43
TDP1-203ENST00000393454 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 ODF1Q14990 250 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 DEFB121Q5J5C9 76 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 BAALCQ8WXS3 180 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 TMEM141Q96I45 108 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 CELA1Q9UNI1 258 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 A0A087WX48 190 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 IGIPA6NJ69 53 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 UBE2D3P61077 147 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 UBE2D2P62837 147 aa6.11□□□□□ -1.43
TDP1-203ENST00000393454 DAZ4Q86SG3 579 aaKnown RBP6.11□□□□□ -1.43
TDP1-203ENST00000393454 DAZ3Q9NR90 486 aaKnown RBP6.11□□□□□ -1.43
TDP1-203ENST00000393454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.1□□□□□ -1.43
TDP1-203ENST00000393454 IGKV2-29A2NJV5 120 aaPredicted RBP6.1□□□□□ -1.43
TDP1-203ENST00000393454 DPM2O94777 84 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 TIMM17AQ99595 171 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 ZMAT4Q9H898 229 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 MRPL35Q9NZE8 188 aaKnown RBP6.1□□□□□ -1.43
TDP1-203ENST00000393454 CHTOPQ9Y3Y2 248 aaKnown RBP6.1□□□□□ -1.43
TDP1-203ENST00000393454 NBEAL1Q6ZS30 2694 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 TRAV12-1A0A0B4J245 112 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 PRSS29PA6NIE9 313 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 IGKCP01834 107 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 DDTP30046 118 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 TCTAP57738 103 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 ZC2HC1BQ5TFG8 222 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 OPRPNQ99935 248 aaPredicted RBP6.1□□□□□ -1.43
TDP1-203ENST00000393454 CHCHD7Q9BUK0 85 aa6.1□□□□□ -1.43
TDP1-203ENST00000393454 MGAM2Q2M2H8 2515 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 ATP5G1P05496 136 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 GYPEP15421 78 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 HTN3P15516 51 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 CRYBA4P53673 196 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 PMVKQ15126 192 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 STPG4Q8N801 248 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 C14orf144Q96I85 54 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 PRO0255Q9UI72 69 aa6.09□□□□□ -1.43
TDP1-203ENST00000393454 LINC00587B1AMM8 73 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 F8VRH5 84 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 K7EIL1 84 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 PAX4O43316 350 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 CEMP1Q6PRD7 247 aaPredicted RBP6.08□□□□□ -1.44
TDP1-203ENST00000393454 MRAPQ8TCY5 172 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 DNAH3Q8TD57 4116 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 A0A0J9YY99 117 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 TEX48A0A1B0GUV7 120 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 F5H768 121 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 PLNP26678 52 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 DGAT2L7PQ6IED9 249 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 SBSPONQ8IVN8 264 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 MIEN1Q9BRT3 115 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 VCX2Q9H322 139 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 CST9LQ9H4G1 147 aa6.08□□□□□ -1.44
TDP1-203ENST00000393454 IGLV4-3A0A075B6K6 122 aa6.07□□□□□ -1.44
TDP1-203ENST00000393454 UBE2L6O14933 153 aa6.07□□□□□ -1.44
TDP1-203ENST00000393454 IGLC3P0DOY3 106 aa6.07□□□□□ -1.44
TDP1-203ENST00000393454 NTM-AS1Q6ZSK4 140 aa6.07□□□□□ -1.44
TDP1-203ENST00000393454 UQCR10Q9UDW1 63 aa6.07□□□□□ -1.44
TDP1-203ENST00000393454 PYGO1Q9Y3Y4 419 aa6.07□□□□□ -1.44
TDP1-203ENST00000393454 A0A096LPF7 62 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 RNASE13Q5GAN3 156 aaKnown RBP6.06□□□□□ -1.44
TDP1-203ENST00000393454 PAPPA-AS1Q5QFB9 102 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 ATP6V0E2Q8NHE4 81 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 TMEM243Q9BU79 118 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 GTSF1LQ9H1H1 148 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 SPANXA1Q9NS26 97 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 UBE2D4Q9Y2X8 147 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 TRBV25-1A0A075B6N4 114 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 TRAV26-1A0A087WT03 109 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 A0A0J9YWU9 116 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 C12orf74Q32Q52 190 aa6.06□□□□□ -1.44
TDP1-203ENST00000393454 KPRPQ5T749 579 aaPredicted RBP6.06□□□□□ -1.44
TDP1-203ENST00000393454 LINC00694P0DN24 101 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 NMUP48645 174 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 DEFA6Q01524 100 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 AMMECR1LQ6DCA0 310 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 VSIG2Q96IQ7 327 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 SPATA25Q9BR10 227 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 FGF6P10767 208 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 SMAGPQ0VAQ4 97 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 TMEM97Q5BJF2 176 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 SLC25A34Q6PIV7 304 aa6.05□□□□□ -1.44
TDP1-203ENST00000393454 Q6ZUT4 128 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms