RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SEC16AO15027 2179 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 H3BQ85 93 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 LECT2O14960 151 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 C3orf79P0CE67 100 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 XCL1P47992 114 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 C3orf56Q8N813 242 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 C10orf105Q8TEF2 133 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 LINC00526Q96FQ7 95 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 NOTCH4Q99466 2003 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 TMEM131Q92545 1883 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 TICRRQ7Z2Z1 1910 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 IGHV3-53P01767 116 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 SLPIP03973 132 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 CCL3P10147 92 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 HCP5Q6MZN7 132 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 NYNRINQ9P2P1 1898 aaKnown RBP2.45□□□□□ -2.02
XRN1-202ENST00000392981 IGLV3-16A0A075B6K0 115 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 A0A0J9YX75 114 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 WFDC2Q14508 124 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 KRTAP15-1Q3LI76 137 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 SPRNQ5BIV9 151 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 KIAA1671Q9BY89 1806 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 APC2O95996 2303 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 TRGV4A0A0C4DH28 118 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 PGLYRP1O75594 196 aaPredicted RBP2.45□□□□□ -2.02
XRN1-202ENST00000392981 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 FAM27BQ5VT28 67 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 C12orf73Q69YU5 71 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 Q6ZTC4 211 aa2.45□□□□□ -2.02
XRN1-202ENST00000392981 TRIOBPQ9H2D6 2365 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 UTP20O75691 2785 aaKnown RBP2.44□□□□□ -2.02
XRN1-202ENST00000392981 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 F2Z2F3 143 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 HMGN4O00479 90 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 ZNF883P0CG24 379 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 NMSQ5H8A3 153 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 Q6ZQT7 251 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 TIMM21Q9BVV7 248 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 VWA8A3KMH1 1905 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 RP1L1Q8IWN7 2480 aaPredicted RBP2.44□□□□□ -2.02
XRN1-202ENST00000392981 A0A096LNJ9 63 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 SH2D6Q7Z4S9 175 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 RPRMLQ8N4K4 120 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.44□□□□□ -2.02
XRN1-202ENST00000392981 HHLA3Q9XRX5 114 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 HCFC1P51610 2035 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 IGKV1D-42A0A075B6H8 117 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 LHBP01229 141 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 LINC00483Q53H64 154 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 HRNRQ86YZ3 2850 aaPredicted RBP2.44□□□□□ -2.02
XRN1-202ENST00000392981 MYLKQ15746 1914 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 PLXNA4Q9HCM2 1894 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 ASCC3Q8N3C0 2202 aaKnown RBP2.44□□□□□ -2.02
XRN1-202ENST00000392981 TRGV5A0A0B4J1U4 118 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 hDV103S1A0JD37 113 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 OOSP1A8MZH6 123 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 CGB3P0DN86 165 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 CGB7P0DN87 165 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 ZFAND2AQ8N6M9 145 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 PRO1854Q9UHT4 67 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 SERP1Q9Y6X1 66 aa2.44□□□□□ -2.02
XRN1-202ENST00000392981 TRAV7A0A075B6U4 112 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 IGHV3-15A0A0B4J1V0 119 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 TRAV13-2A0A0B4J235 113 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 RNASE4P34096 147 aaKnown RBP2.43□□□□□ -2.02
XRN1-202ENST00000392981 ATP5EP56381 51 aaPredicted RBP2.43□□□□□ -2.02
XRN1-202ENST00000392981 NREPQ16612 68 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 LYZL1Q6UWQ5 148 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 LINC00574Q9H8X3 128 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 TP53TG3Q9ULZ0 132 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 LINC00588Q9Y4M8 146 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 CACNA1DQ01668 2161 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 IGKV1-9A0A0C4DH69 117 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 LY6LH3BQJ8 138 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 PSCAO43653 123 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 COX8AP10176 69 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 Q6ZR03 302 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 C11orf1Q9H5F2 150 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 BAALC-AS2P0C853 105 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 COX6A1P12074 109 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 ZNF22P17026 224 aaPredicted RBP2.43□□□□□ -2.02
XRN1-202ENST00000392981 DSCR4P56555 118 aaPredicted RBP2.43□□□□□ -2.02
XRN1-202ENST00000392981 SPTBN1Q01082 2364 aaKnown RBP2.43□□□□□ -2.02
XRN1-202ENST00000392981 LGALS9BQ3B8N2 356 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 RNF5Q99942 180 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 ORMDL1Q9P0S3 153 aa2.43□□□□□ -2.02
XRN1-202ENST00000392981 NUP210Q8TEM1 1887 aaPredicted RBP2.43□□□□□ -2.02
XRN1-202ENST00000392981 IGKV3D-7A0A0C4DH55 119 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 INSL4Q14641 139 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 B9D2Q9BPU9 175 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 SCN1AP35498 2009 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 LINC00311Q8N616 119 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 Q8N7P7 452 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 FAM104AQ969W3 186 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 PRRC2BQ5JSZ5 2229 aaKnown RBP2.42□□□□□ -2.02
XRN1-202ENST00000392981 UBE2DNLQ8IWF7 75 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 DOCK8Q8NF50 2099 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 CYSRT1A8MQ03 144 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 KRTAP4-16G5E9R7 235 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms