RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 PRADC1Q9BSG0 188 aa13.74□□□□□ -0.21
ERCC2-203ENST00000391944 DAZ2Q13117 558 aaKnown RBP13.74□□□□□ -0.21
ERCC2-203ENST00000391944 FN1P02751 2386 aaKnown RBP13.73□□□□□ -0.21
ERCC2-203ENST00000391944 MYMXA0A1B0GTQ4 84 aa13.73□□□□□ -0.21
ERCC2-203ENST00000391944 Q6ZTI0 123 aa13.73□□□□□ -0.21
ERCC2-203ENST00000391944 ZNRF2Q8NHG8 242 aa13.73□□□□□ -0.21
ERCC2-203ENST00000391944 IGLV4-3A0A075B6K6 122 aa13.73□□□□□ -0.21
ERCC2-203ENST00000391944 NFE4Q86UQ8 179 aa13.72□□□□□ -0.21
ERCC2-203ENST00000391944 NOTCH3Q9UM47 2321 aa13.72□□□□□ -0.21
ERCC2-203ENST00000391944 C16orf74Q96GX8 76 aa13.72□□□□□ -0.21
ERCC2-203ENST00000391944 ZNF479Q96JC4 524 aa13.72□□□□□ -0.21
ERCC2-203ENST00000391944 VCX2Q9H322 139 aa13.72□□□□□ -0.21
ERCC2-203ENST00000391944 CRLF1O75462 422 aa13.71□□□□□ -0.21
ERCC2-203ENST00000391944 HERVK_113P61574 105 aa13.71□□□□□ -0.21
ERCC2-203ENST00000391944 CHCHD7Q9BUK0 85 aa13.71□□□□□ -0.21
ERCC2-203ENST00000391944 NOP10Q9NPE3 64 aaKnown RBP13.71□□□□□ -0.21
ERCC2-203ENST00000391944 TRAV4A0A0B4J268 109 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 PLAC8L1A1L4L8 177 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 H3BRM9 83 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 GCSHP23434 173 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 CRYBA4P53673 196 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 UBE2V1Q13404 147 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 TAL2Q16559 108 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 FAM104AQ969W3 186 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 TM2D2Q9BX73 214 aa13.7□□□□□ -0.22
ERCC2-203ENST00000391944 TMEM170BQ5T4T1 132 aa13.69□□□□□ -0.22
ERCC2-203ENST00000391944 INSL3P51460 131 aa13.69□□□□□ -0.22
ERCC2-203ENST00000391944 COTL1Q14019 142 aa13.69□□□□□ -0.22
ERCC2-203ENST00000391944 CEND1Q8N111 149 aa13.69□□□□□ -0.22
ERCC2-203ENST00000391944 FXYD2P54710 66 aa13.68□□□□□ -0.22
ERCC2-203ENST00000391944 VAMP3Q15836 100 aa13.68□□□□□ -0.22
ERCC2-203ENST00000391944 RRN3P1Q2M238 152 aa13.68□□□□□ -0.22
ERCC2-203ENST00000391944 PHLDA1Q8WV24 401 aaPredicted RBP13.68□□□□□ -0.22
ERCC2-203ENST00000391944 AMELXQ99217 191 aa13.68□□□□□ -0.22
ERCC2-203ENST00000391944 IGHV3-38A0A0C4DH36 116 aa13.68□□□□□ -0.22
ERCC2-203ENST00000391944 TRBV7-3A0A075B6L6 115 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 TRBV10-1A0A0K0K1A3 114 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 PTTG1IPP53801 180 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 SPANXA1Q9NS26 97 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 VWFP04275 2813 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 ZNF815PA8K554 130 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 CCL25O15444 150 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 UBE2D4Q9Y2X8 147 aa13.67□□□□□ -0.22
ERCC2-203ENST00000391944 K7EP13 123 aa13.66□□□□□ -0.22
ERCC2-203ENST00000391944 CEMP1Q6PRD7 247 aaPredicted RBP13.66□□□□□ -0.22
ERCC2-203ENST00000391944 K7EQD1 137 aa13.65□□□□□ -0.22
ERCC2-203ENST00000391944 C9orf66Q5T8R8 295 aa13.65□□□□□ -0.22
ERCC2-203ENST00000391944 C9orf118A6NHY6 69 aa13.65□□□□□ -0.22
ERCC2-203ENST00000391944 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
ERCC2-203ENST00000391944 A0A0J9YXV3 536 aa13.64□□□□□ -0.23
ERCC2-203ENST00000391944 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
ERCC2-203ENST00000391944 RPL36AP83881 106 aaKnown RBP13.64□□□□□ -0.23
ERCC2-203ENST00000391944 SLC25A29Q8N8R3 303 aa13.64□□□□□ -0.23
ERCC2-203ENST00000391944 RPL36ALQ969Q0 106 aaKnown RBP13.64□□□□□ -0.23
ERCC2-203ENST00000391944 HIST1H4GQ99525 98 aa13.64□□□□□ -0.23
ERCC2-203ENST00000391944 TENM1Q9UKZ4 2725 aa13.64□□□□□ -0.23
ERCC2-203ENST00000391944 SMIM13P0DJ93 91 aa13.64□□□□□ -0.23
ERCC2-203ENST00000391944 AMMECR1LQ6DCA0 310 aa13.64□□□□□ -0.23
ERCC2-203ENST00000391944 SPATA3Q8NHX4 192 aa13.64□□□□□ -0.23
ERCC2-203ENST00000391944 TMEM223A0PJW6 202 aa13.63□□□□□ -0.23
ERCC2-203ENST00000391944 GAGE12BA1L429 117 aa13.63□□□□□ -0.23
ERCC2-203ENST00000391944 CIDEAO60543 219 aa13.63□□□□□ -0.23
ERCC2-203ENST00000391944 GAGE7O76087 117 aa13.63□□□□□ -0.23
ERCC2-203ENST00000391944 GAGE12FP0CL80 117 aa13.63□□□□□ -0.23
ERCC2-203ENST00000391944 GAGE12GP0CL81 117 aa13.63□□□□□ -0.23
ERCC2-203ENST00000391944 GAGE12IP0CL82 117 aa13.63□□□□□ -0.23
ERCC2-203ENST00000391944 ZNF22P17026 224 aaPredicted RBP13.63□□□□□ -0.23
ERCC2-203ENST00000391944 CITED1Q99966 193 aa13.63□□□□□ -0.23
ERCC2-203ENST00000391944 TRGV2A0A075B6R0 118 aa13.62□□□□□ -0.23
ERCC2-203ENST00000391944 MRPS36P82909 103 aaKnown RBP13.62□□□□□ -0.23
ERCC2-203ENST00000391944 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.62□□□□□ -0.23
ERCC2-203ENST00000391944 TSPEAR-AS2P59090 65 aa13.62□□□□□ -0.23
ERCC2-203ENST00000391944 DAZ4Q86SG3 579 aaKnown RBP13.62□□□□□ -0.23
ERCC2-203ENST00000391944 DAZ3Q9NR90 486 aaKnown RBP13.62□□□□□ -0.23
ERCC2-203ENST00000391944 SCGB1D4Q6XE38 83 aa13.61□□□□□ -0.23
ERCC2-203ENST00000391944 RAB37Q96AX2 223 aa13.61□□□□□ -0.23
ERCC2-203ENST00000391944 PLEKHB2Q96CS7 222 aa13.61□□□□□ -0.23
ERCC2-203ENST00000391944 J3QQQ9 107 aa13.61□□□□□ -0.23
ERCC2-203ENST00000391944 UBE2D3P61077 147 aa13.61□□□□□ -0.23
ERCC2-203ENST00000391944 UBE2D2P62837 147 aa13.61□□□□□ -0.23
ERCC2-203ENST00000391944 TIMM21Q9BVV7 248 aa13.61□□□□□ -0.23
ERCC2-203ENST00000391944 LEPROTO15243 131 aa13.59□□□□□ -0.23
ERCC2-203ENST00000391944 RNASE13Q5GAN3 156 aaKnown RBP13.59□□□□□ -0.23
ERCC2-203ENST00000391944 NHP2Q9NX24 153 aaKnown RBP13.59□□□□□ -0.23
ERCC2-203ENST00000391944 H3BUT2 72 aa13.59□□□□□ -0.23
ERCC2-203ENST00000391944 Q6ZUT4 128 aa13.59□□□□□ -0.23
ERCC2-203ENST00000391944 TRBV6-4A0A1B0GX49 114 aa13.58□□□□□ -0.23
ERCC2-203ENST00000391944 A0A0J9YY99 117 aa13.58□□□□□ -0.24
ERCC2-203ENST00000391944 GAGE12JA6NER3 117 aa13.58□□□□□ -0.24
ERCC2-203ENST00000391944 GAGE4Q13068 117 aa13.58□□□□□ -0.24
ERCC2-203ENST00000391944 GAGE5Q13069 117 aa13.58□□□□□ -0.24
ERCC2-203ENST00000391944 GAGE13Q4V321 117 aa13.58□□□□□ -0.24
ERCC2-203ENST00000391944 LGALS3P17931 250 aaKnown RBP13.57□□□□□ -0.24
ERCC2-203ENST00000391944 NTM-AS1Q6ZSK4 140 aa13.57□□□□□ -0.24
ERCC2-203ENST00000391944 TEP1Q99973 2627 aaKnown RBP13.57□□□□□ -0.24
ERCC2-203ENST00000391944 TINCRA0A1B0GVN0 87 aa13.57□□□□□ -0.24
ERCC2-203ENST00000391944 K7ERJ3 54 aa13.56□□□□□ -0.24
ERCC2-203ENST00000391944 NAA38Q9BRA0 125 aaKnown RBP13.56□□□□□ -0.24
ERCC2-203ENST00000391944 ATRQ13535 2644 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms