RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 RNF138Q8WVD3 245 aa12.18□□□□□ -0.46
SHANK1-204ENST00000391814 HIGD2AQ9BW72 106 aa12.18□□□□□ -0.46
SHANK1-204ENST00000391814 A6NED7 52 aa12.18□□□□□ -0.46
SHANK1-204ENST00000391814 Q6ZS46 218 aa12.18□□□□□ -0.46
SHANK1-204ENST00000391814 Q8N7P7 452 aa12.18□□□□□ -0.46
SHANK1-204ENST00000391814 UFSP1Q6NVU6 142 aa12.17□□□□□ -0.46
SHANK1-204ENST00000391814 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
SHANK1-204ENST00000391814 PRR4Q16378 134 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 FAM30AQ9NZY2 134 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 NUP210LQ5VU65 1888 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 A0A0J9YX75 114 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 EIF4EBP1Q13541 118 aaPredicted RBP12.16□□□□□ -0.46
SHANK1-204ENST00000391814 KIF26AQ9ULI4 1882 aaPredicted RBP12.16□□□□□ -0.46
SHANK1-204ENST00000391814 TRBV27A0A0K0K1C4 114 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 DCANP1Q8TF63 244 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 SPRY4Q9C004 299 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 K7ERS5 55 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 CCDC140Q96MF4 163 aa12.16□□□□□ -0.46
SHANK1-204ENST00000391814 LST1O00453 97 aa12.15□□□□□ -0.46
SHANK1-204ENST00000391814 K7EMT4 169 aa12.15□□□□□ -0.46
SHANK1-204ENST00000391814 Q6Q795 121 aa12.15□□□□□ -0.47
SHANK1-204ENST00000391814 B9D2Q9BPU9 175 aa12.15□□□□□ -0.47
SHANK1-204ENST00000391814 C3orf84H3BNL1 204 aa12.14□□□□□ -0.47
SHANK1-204ENST00000391814 CNOT1A5YKK6 2376 aaKnown RBP12.14□□□□□ -0.47
SHANK1-204ENST00000391814 LINC00269Q8N2A0 174 aa12.13□□□□□ -0.47
SHANK1-204ENST00000391814 C9orf66Q5T8R8 295 aa12.13□□□□□ -0.47
SHANK1-204ENST00000391814 COL6A6A6NMZ7 2263 aa12.13□□□□□ -0.47
SHANK1-204ENST00000391814 FAM19A5Q7Z5A7 132 aaPredicted RBP12.13□□□□□ -0.47
SHANK1-204ENST00000391814 NRGNQ92686 78 aa12.13□□□□□ -0.47
SHANK1-204ENST00000391814 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
SHANK1-204ENST00000391814 IGLV1-47P01700 117 aa12.13□□□□□ -0.47
SHANK1-204ENST00000391814 LINC00310P59036 64 aa12.13□□□□□ -0.47
SHANK1-204ENST00000391814 SMAD5-AS1Q9Y6J3 95 aa12.13□□□□□ -0.47
SHANK1-204ENST00000391814 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
SHANK1-204ENST00000391814 IGHV4-30-4P0DP06 118 aa12.12□□□□□ -0.47
SHANK1-204ENST00000391814 IGHV4-31P0DP07 118 aa12.12□□□□□ -0.47
SHANK1-204ENST00000391814 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
SHANK1-204ENST00000391814 PROK1P58294 105 aa12.12□□□□□ -0.47
SHANK1-204ENST00000391814 SERP1Q9Y6X1 66 aa12.12□□□□□ -0.47
SHANK1-204ENST00000391814 IGHV4-61A0A0C4DH41 118 aa12.11□□□□□ -0.47
SHANK1-204ENST00000391814 NRACQ8N912 160 aa12.11□□□□□ -0.47
SHANK1-204ENST00000391814 SOSTDC1Q6X4U4 206 aa12.11□□□□□ -0.47
SHANK1-204ENST00000391814 C22orf34Q6ZV56 151 aa12.11□□□□□ -0.47
SHANK1-204ENST00000391814 ZFAND3Q9H8U3 227 aa12.11□□□□□ -0.47
SHANK1-204ENST00000391814 LOC107984640A0A0U1RRK4 108 aa12.11□□□□□ -0.47
SHANK1-204ENST00000391814 CACNA1BQ00975 2339 aa12.11□□□□□ -0.47
SHANK1-204ENST00000391814 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
SHANK1-204ENST00000391814 Q6JHZ5 121 aa12.1□□□□□ -0.47
SHANK1-204ENST00000391814 DYSFO75923 2080 aa12.1□□□□□ -0.47
SHANK1-204ENST00000391814 CRIP2P52943 208 aaPredicted RBP12.1□□□□□ -0.47
SHANK1-204ENST00000391814 PRR15LQ9BU68 103 aa12.1□□□□□ -0.47
SHANK1-204ENST00000391814 MAP6D1Q9H9H5 199 aa12.1□□□□□ -0.47
SHANK1-204ENST00000391814 SMIM26A0A096LP01 95 aa12.1□□□□□ -0.47
SHANK1-204ENST00000391814 SMIM11BQ8TCY0 68 aa12.09□□□□□ -0.47
SHANK1-204ENST00000391814 C4orf3Q8WVX3 66 aa12.09□□□□□ -0.47
SHANK1-204ENST00000391814 MYCNOSP40205 109 aa12.09□□□□□ -0.47
SHANK1-204ENST00000391814 M0QY20 66 aa12.09□□□□□ -0.47
SHANK1-204ENST00000391814 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.47
SHANK1-204ENST00000391814 REG3AQ06141 175 aa12.08□□□□□ -0.47
SHANK1-204ENST00000391814 Q6ZTI0 123 aa12.08□□□□□ -0.48
SHANK1-204ENST00000391814 KLK5Q9Y337 293 aaPredicted RBP12.08□□□□□ -0.48
SHANK1-204ENST00000391814 CCKP06307 115 aa12.08□□□□□ -0.48
SHANK1-204ENST00000391814 FAM19A1Q7Z5A9 133 aa12.08□□□□□ -0.48
SHANK1-204ENST00000391814 TRBV10-1A0A0K0K1A3 114 aa12.08□□□□□ -0.48
SHANK1-204ENST00000391814 MSMPQ1L6U9 139 aa12.08□□□□□ -0.48
SHANK1-204ENST00000391814 FAM19A3Q7Z5A8 133 aa12.08□□□□□ -0.48
SHANK1-204ENST00000391814 IBA57-AS1B1ANH7 110 aa12.07□□□□□ -0.48
SHANK1-204ENST00000391814 CHCHD10Q8WYQ3 142 aaPredicted RBP12.07□□□□□ -0.48
SHANK1-204ENST00000391814 C1orf158Q8N1D5 194 aa12.07□□□□□ -0.48
SHANK1-204ENST00000391814 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
SHANK1-204ENST00000391814 LINC01548A6NM66 108 aa12.07□□□□□ -0.48
SHANK1-204ENST00000391814 ADAMTS9Q9P2N4 1935 aa12.07□□□□□ -0.48
SHANK1-204ENST00000391814 MIFP14174 115 aa12.07□□□□□ -0.48
SHANK1-204ENST00000391814 C6orf99Q4VX62 202 aa12.07□□□□□ -0.48
SHANK1-204ENST00000391814 LINC00526Q96FQ7 95 aa12.07□□□□□ -0.48
SHANK1-204ENST00000391814 RETNQ9HD89 108 aa12.06□□□□□ -0.48
SHANK1-204ENST00000391814 TSHBP01222 138 aa12.06□□□□□ -0.48
SHANK1-204ENST00000391814 URB1-AS1Q96HZ7 61 aa12.05□□□□□ -0.48
SHANK1-204ENST00000391814 DOCK7Q96N67 2140 aa12.05□□□□□ -0.48
SHANK1-204ENST00000391814 MRPS36P82909 103 aaKnown RBP12.05□□□□□ -0.48
SHANK1-204ENST00000391814 A0A087WVE0 104 aa12.05□□□□□ -0.48
SHANK1-204ENST00000391814 A0A087WZ39 114 aa12.05□□□□□ -0.48
SHANK1-204ENST00000391814 SPINK6Q6UWN8 80 aa12.04□□□□□ -0.48
SHANK1-204ENST00000391814 WFDC13Q8IUB5 93 aa12.04□□□□□ -0.48
SHANK1-204ENST00000391814 PMAIP1Q13794 54 aa12.03□□□□□ -0.48
SHANK1-204ENST00000391814 ODF3Q96PU9 254 aa12.03□□□□□ -0.48
SHANK1-204ENST00000391814 NACAE9PAV3 2078 aa12.03□□□□□ -0.48
SHANK1-204ENST00000391814 POM121L12Q8N7R1 296 aa12.02□□□□□ -0.48
SHANK1-204ENST00000391814 DEFB113Q30KQ7 82 aa12.02□□□□□ -0.48
SHANK1-204ENST00000391814 Q6ZSV7 163 aa12.02□□□□□ -0.49
SHANK1-204ENST00000391814 PPDPFQ9H3Y8 114 aa12.01□□□□□ -0.49
SHANK1-204ENST00000391814 PRO0255Q9UI72 69 aa12.01□□□□□ -0.49
SHANK1-204ENST00000391814 EBI3Q14213 229 aa12.01□□□□□ -0.49
SHANK1-204ENST00000391814 FAM222AQ5U5X8 452 aa12□□□□□ -0.49
SHANK1-204ENST00000391814 ACACAQ13085 2346 aa12□□□□□ -0.49
SHANK1-204ENST00000391814 KIAA1549Q9HCM3 1950 aa12□□□□□ -0.49
SHANK1-204ENST00000391814 NANOS2P60321 138 aaKnown RBP12□□□□□ -0.49
SHANK1-204ENST00000391814 XAGE1AQ9HD64 81 aa12□□□□□ -0.49
SHANK1-204ENST00000391814 TRAV7A0A075B6U4 112 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms