RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 TRGV2A0A075B6R0 118 aa18.02■□□□□ 0.48
SHOX2-201ENST00000389589 IGKV2D-26A0A0A0MRZ7 120 aa18.02■□□□□ 0.48
SHOX2-201ENST00000389589 COTL1Q14019 142 aa18.02■□□□□ 0.47
SHOX2-201ENST00000389589 GAGE12BA1L429 117 aa18.01■□□□□ 0.47
SHOX2-201ENST00000389589 SMIM9A6NGZ8 99 aa18.01■□□□□ 0.47
SHOX2-201ENST00000389589 GAGE7O76087 117 aa18.01■□□□□ 0.47
SHOX2-201ENST00000389589 GAGE12FP0CL80 117 aa18.01■□□□□ 0.47
SHOX2-201ENST00000389589 GAGE12GP0CL81 117 aa18.01■□□□□ 0.47
SHOX2-201ENST00000389589 GAGE12IP0CL82 117 aa18.01■□□□□ 0.47
SHOX2-201ENST00000389589 KIR2DL5BQ8NHK3 375 aa18.01■□□□□ 0.47
SHOX2-201ENST00000389589 TRBV7-3A0A075B6L6 115 aa18■□□□□ 0.47
SHOX2-201ENST00000389589 NPSP0C0P6 89 aa18■□□□□ 0.47
SHOX2-201ENST00000389589 RPL36AP83881 106 aaKnown RBP18■□□□□ 0.47
SHOX2-201ENST00000389589 RPL36ALQ969Q0 106 aaKnown RBP18■□□□□ 0.47
SHOX2-201ENST00000389589 MPV17L2Q567V2 206 aa18■□□□□ 0.47
SHOX2-201ENST00000389589 KRTAP24-1Q3LI83 254 aa17.99■□□□□ 0.47
SHOX2-201ENST00000389589 TMEM97Q5BJF2 176 aa17.99■□□□□ 0.47
SHOX2-201ENST00000389589 ZNRF2Q8NHG8 242 aa17.99■□□□□ 0.47
SHOX2-201ENST00000389589 IGLV4-69A0A075B6H9 119 aa17.99■□□□□ 0.47
SHOX2-201ENST00000389589 CHCHD7Q9BUK0 85 aa17.99■□□□□ 0.47
SHOX2-201ENST00000389589 APOC4P55056 127 aa17.98■□□□□ 0.47
SHOX2-201ENST00000389589 PHLDA1Q8WV24 401 aaPredicted RBP17.98■□□□□ 0.47
SHOX2-201ENST00000389589 CRYBA4P53673 196 aa17.97■□□□□ 0.47
SHOX2-201ENST00000389589 SLC25A29Q8N8R3 303 aa17.97■□□□□ 0.47
SHOX2-201ENST00000389589 IGLV4-3A0A075B6K6 122 aa17.97■□□□□ 0.47
SHOX2-201ENST00000389589 VCX2Q9H322 139 aa17.96■□□□□ 0.47
SHOX2-201ENST00000389589 SPANXA1Q9NS26 97 aa17.96■□□□□ 0.47
SHOX2-201ENST00000389589 IGHV3-38A0A0C4DH36 116 aa17.95■□□□□ 0.46
SHOX2-201ENST00000389589 C11orf86A6NJI1 115 aa17.95■□□□□ 0.46
SHOX2-201ENST00000389589 BVES-AS1Q5T3Y7 98 aa17.95■□□□□ 0.46
SHOX2-201ENST00000389589 DAZ4Q86SG3 579 aaKnown RBP17.95■□□□□ 0.46
SHOX2-201ENST00000389589 LURAP1LQ8IV03 231 aa17.95■□□□□ 0.46
SHOX2-201ENST00000389589 DAZ3Q9NR90 486 aaKnown RBP17.95■□□□□ 0.46
SHOX2-201ENST00000389589 X6R8D5 127 aa17.95■□□□□ 0.46
SHOX2-201ENST00000389589 OPRPNQ99935 248 aaPredicted RBP17.95■□□□□ 0.46
SHOX2-201ENST00000389589 TRBV6-4A0A1B0GX49 114 aa17.94■□□□□ 0.46
SHOX2-201ENST00000389589 HIGD1BQ9P298 99 aa17.94■□□□□ 0.46
SHOX2-201ENST00000389589 E9PLD3 99 aa17.94■□□□□ 0.46
SHOX2-201ENST00000389589 OR11H2Q8NH07 326 aa17.94■□□□□ 0.46
SHOX2-201ENST00000389589 EMP1P54849 157 aa17.93■□□□□ 0.46
SHOX2-201ENST00000389589 NFE4Q86UQ8 179 aa17.93■□□□□ 0.46
SHOX2-201ENST00000389589 TRGV4A0A0C4DH28 118 aa17.92■□□□□ 0.46
SHOX2-201ENST00000389589 UBE2D3P61077 147 aa17.92■□□□□ 0.46
SHOX2-201ENST00000389589 HERVK_113P61574 105 aa17.92■□□□□ 0.46
SHOX2-201ENST00000389589 UBE2D2P62837 147 aa17.92■□□□□ 0.46
SHOX2-201ENST00000389589 TRAV8-6A0A0B4J262 113 aa17.92■□□□□ 0.46
SHOX2-201ENST00000389589 LINC00612Q8N6U2 182 aa17.92■□□□□ 0.46
SHOX2-201ENST00000389589 UBE2D4Q9Y2X8 147 aa17.92■□□□□ 0.46
SHOX2-201ENST00000389589 HSD52Q0P140 79 aa17.91■□□□□ 0.46
SHOX2-201ENST00000389589 AMELXQ99217 191 aa17.91■□□□□ 0.46
SHOX2-201ENST00000389589 TTTY13Q9BZ97 58 aa17.91■□□□□ 0.46
SHOX2-201ENST00000389589 ZMAT5Q9UDW3 170 aaKnown RBP17.91■□□□□ 0.46
SHOX2-201ENST00000389589 C3orf56Q8N813 242 aa17.9■□□□□ 0.46
SHOX2-201ENST00000389589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.89■□□□□ 0.45
SHOX2-201ENST00000389589 IGKV2-29A2NJV5 120 aaPredicted RBP17.89■□□□□ 0.45
SHOX2-201ENST00000389589 GAGE12JA6NER3 117 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 GAGE1Q13065 139 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 GAGE4Q13068 117 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 GAGE5Q13069 117 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 GAGE13Q4V321 117 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 TRBV25-1A0A075B6N4 114 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 FHL2Q14192 279 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 SHISA2Q6UWI4 295 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 FAM104AQ969W3 186 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 PRADC1Q9BSG0 188 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 TIMM21Q9BVV7 248 aa17.89■□□□□ 0.45
SHOX2-201ENST00000389589 CHAC1Q9BUX1 264 aa17.88■□□□□ 0.45
SHOX2-201ENST00000389589 MAPKAPK5-AS1Q8N8E1 139 aa17.87■□□□□ 0.45
SHOX2-201ENST00000389589 DEFB135Q30KP9 77 aa17.87■□□□□ 0.45
SHOX2-201ENST00000389589 TMEM170BQ5T4T1 132 aa17.87■□□□□ 0.45
SHOX2-201ENST00000389589 CEMP1Q6PRD7 247 aaPredicted RBP17.86■□□□□ 0.45
SHOX2-201ENST00000389589 DEFB130BP0DP73 79 aa17.86■□□□□ 0.45
SHOX2-201ENST00000389589 DEFB130AP0DP74 79 aa17.86■□□□□ 0.45
SHOX2-201ENST00000389589 SEC11AP67812 179 aa17.86■□□□□ 0.45
SHOX2-201ENST00000389589 GTSF1LQ9H1H1 148 aa17.86■□□□□ 0.45
SHOX2-201ENST00000389589 MYMXA0A1B0GTQ4 84 aa17.85■□□□□ 0.45
SHOX2-201ENST00000389589 LYRM9A8MSI8 78 aa17.85■□□□□ 0.45
SHOX2-201ENST00000389589 MRPS36P82909 103 aaKnown RBP17.85■□□□□ 0.45
SHOX2-201ENST00000389589 SMAGPQ0VAQ4 97 aa17.84■□□□□ 0.45
SHOX2-201ENST00000389589 IGHV4-30-4P0DP06 118 aa17.83■□□□□ 0.45
SHOX2-201ENST00000389589 ORAOV1Q8WV07 137 aa17.83■□□□□ 0.45
SHOX2-201ENST00000389589 A0A0J9YXV3 536 aa17.83■□□□□ 0.44
SHOX2-201ENST00000389589 NTM-AS1Q6ZSK4 140 aa17.83■□□□□ 0.44
SHOX2-201ENST00000389589 TRRAPQ9Y4A5 3859 aa17.82■□□□□ 0.44
SHOX2-201ENST00000389589 DGAT2L7PQ6IED9 249 aa17.82■□□□□ 0.44
SHOX2-201ENST00000389589 CYSRT1A8MQ03 144 aa17.81■□□□□ 0.44
SHOX2-201ENST00000389589 ZNF25P17030 456 aaPredicted RBP17.81■□□□□ 0.44
SHOX2-201ENST00000389589 ZNF22P17026 224 aaPredicted RBP17.81■□□□□ 0.44
SHOX2-201ENST00000389589 Q6ZUT4 128 aa17.81■□□□□ 0.44
SHOX2-201ENST00000389589 CSDC2Q9Y534 153 aaKnown RBP17.81■□□□□ 0.44
SHOX2-201ENST00000389589 LOC100131303A0A0U1RQF7 123 aa17.8■□□□□ 0.44
SHOX2-201ENST00000389589 FAM222AQ5U5X8 452 aa17.8■□□□□ 0.44
SHOX2-201ENST00000389589 SBSPONQ8IVN8 264 aa17.8■□□□□ 0.44
SHOX2-201ENST00000389589 TMEM223A0PJW6 202 aa17.79■□□□□ 0.44
SHOX2-201ENST00000389589 MIFP14174 115 aa17.79■□□□□ 0.44
SHOX2-201ENST00000389589 PRIMA1Q86XR5 153 aa17.79■□□□□ 0.44
SHOX2-201ENST00000389589 A6NDN8 102 aa17.79■□□□□ 0.44
SHOX2-201ENST00000389589 TAL2Q16559 108 aa17.79■□□□□ 0.44
SHOX2-201ENST00000389589 OXLD1Q5BKU9 147 aa17.79■□□□□ 0.44
SHOX2-201ENST00000389589 ZNF815PA8K554 130 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms