RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 BAALCQ8WXS3 180 aa11.22□□□□□ -0.61
LRRK1-201ENST00000388948 A0A1W2PPM0 123 aa11.22□□□□□ -0.61
LRRK1-201ENST00000388948 Q6ZVH6 145 aa11.22□□□□□ -0.61
LRRK1-201ENST00000388948 C2CD3Q4AC94 2353 aa11.22□□□□□ -0.61
LRRK1-201ENST00000388948 C11orf71Q6IPW1 123 aa11.22□□□□□ -0.61
LRRK1-201ENST00000388948 K7EQG2 157 aa11.22□□□□□ -0.61
LRRK1-201ENST00000388948 LINC01545Q5VT33 79 aa11.22□□□□□ -0.61
LRRK1-201ENST00000388948 CEMP1Q6PRD7 247 aaPredicted RBP11.21□□□□□ -0.61
LRRK1-201ENST00000388948 CHCHD10Q8WYQ3 142 aaPredicted RBP11.21□□□□□ -0.61
LRRK1-201ENST00000388948 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
LRRK1-201ENST00000388948 ZNF462Q96JM2 2506 aa11.21□□□□□ -0.62
LRRK1-201ENST00000388948 Q6ZUT4 128 aa11.21□□□□□ -0.62
LRRK1-201ENST00000388948 A4D1N5 150 aa11.21□□□□□ -0.62
LRRK1-201ENST00000388948 COX7BP24311 80 aa11.21□□□□□ -0.62
LRRK1-201ENST00000388948 UFSP1Q6NVU6 142 aa11.21□□□□□ -0.62
LRRK1-201ENST00000388948 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.62
LRRK1-201ENST00000388948 HCFC1P51610 2035 aa11.2□□□□□ -0.62
LRRK1-201ENST00000388948 ALPK3Q96L96 1907 aa11.2□□□□□ -0.62
LRRK1-201ENST00000388948 TOMM6Q96B49 74 aa11.2□□□□□ -0.62
LRRK1-201ENST00000388948 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
LRRK1-201ENST00000388948 MAJINQ3KP22 176 aa11.19□□□□□ -0.62
LRRK1-201ENST00000388948 C5orf47Q569G3 176 aa11.19□□□□□ -0.62
LRRK1-201ENST00000388948 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
LRRK1-201ENST00000388948 PSMG3-AS1Q96PY0 264 aa11.19□□□□□ -0.62
LRRK1-201ENST00000388948 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
LRRK1-201ENST00000388948 ZNF702PQ9H963 129 aa11.18□□□□□ -0.62
LRRK1-201ENST00000388948 IGLV2-14P01704 120 aa11.18□□□□□ -0.62
LRRK1-201ENST00000388948 CTRLP40313 264 aa11.18□□□□□ -0.62
LRRK1-201ENST00000388948 IGKV4-1P06312 121 aa11.17□□□□□ -0.62
LRRK1-201ENST00000388948 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
LRRK1-201ENST00000388948 NPSP0C0P6 89 aa11.17□□□□□ -0.62
LRRK1-201ENST00000388948 K7EP34 96 aa11.17□□□□□ -0.62
LRRK1-201ENST00000388948 WFDC9Q8NEX5 89 aa11.17□□□□□ -0.62
LRRK1-201ENST00000388948 ODF3Q96PU9 254 aa11.17□□□□□ -0.62
LRRK1-201ENST00000388948 RBM3P98179 157 aaKnown RBP11.17□□□□□ -0.62
LRRK1-201ENST00000388948 C20orf203Q8NBC4 194 aa11.17□□□□□ -0.62
LRRK1-201ENST00000388948 CITED1Q99966 193 aa11.16□□□□□ -0.62
LRRK1-201ENST00000388948 NDUFS6O75380 124 aaKnown RBP11.16□□□□□ -0.62
LRRK1-201ENST00000388948 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
LRRK1-201ENST00000388948 IGHV1-58A0A0C4DH39 117 aa11.16□□□□□ -0.62
LRRK1-201ENST00000388948 SEC61GP60059 68 aa11.16□□□□□ -0.62
LRRK1-201ENST00000388948 WFDC10AQ9H1F0 79 aa11.16□□□□□ -0.62
LRRK1-201ENST00000388948 MUC4Q99102 2169 aa11.15□□□□□ -0.62
LRRK1-201ENST00000388948 FN1P02751 2386 aaKnown RBP11.15□□□□□ -0.62
LRRK1-201ENST00000388948 A0A0J9YWU9 116 aa11.15□□□□□ -0.62
LRRK1-201ENST00000388948 FSTL3O95633 263 aa11.15□□□□□ -0.63
LRRK1-201ENST00000388948 TLN2Q9Y4G6 2542 aa11.15□□□□□ -0.63
LRRK1-201ENST00000388948 BBC3Q96PG8 261 aaPredicted RBP11.15□□□□□ -0.63
LRRK1-201ENST00000388948 CHD8Q9HCK8 2581 aa11.14□□□□□ -0.63
LRRK1-201ENST00000388948 NANOS2P60321 138 aaKnown RBP11.14□□□□□ -0.63
LRRK1-201ENST00000388948 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
LRRK1-201ENST00000388948 PSMB8P28062 276 aa11.14□□□□□ -0.63
LRRK1-201ENST00000388948 TET2Q6N021 2002 aaPredicted RBP11.14□□□□□ -0.63
LRRK1-201ENST00000388948 ABCA12Q86UK0 2595 aa11.14□□□□□ -0.63
LRRK1-201ENST00000388948 NUP210LQ5VU65 1888 aa11.14□□□□□ -0.63
LRRK1-201ENST00000388948 C11orf86A6NJI1 115 aa11.14□□□□□ -0.63
LRRK1-201ENST00000388948 SPANXDQ9BXN6 97 aa11.14□□□□□ -0.63
LRRK1-201ENST00000388948 K7EP13 123 aa11.13□□□□□ -0.63
LRRK1-201ENST00000388948 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
LRRK1-201ENST00000388948 PLA2G2EQ9NZK7 142 aa11.13□□□□□ -0.63
LRRK1-201ENST00000388948 JMJD7-PLA2G4BH0Y9G9 81 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 CASC2Q6XLA1 102 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 IGKV3D-7A0A0C4DH55 119 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 KRTAP10-9P60411 292 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 C20orf173Q96LM9 149 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 EXPH5Q8NEV8 1989 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 SYCNQ0VAF6 134 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 LINC00574Q9H8X3 128 aa11.12□□□□□ -0.63
LRRK1-201ENST00000388948 LINC00322Q6ZN03 302 aaPredicted RBP11.11□□□□□ -0.63
LRRK1-201ENST00000388948 TLN1Q9Y490 2541 aaKnown RBP11.11□□□□□ -0.63
LRRK1-201ENST00000388948 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
LRRK1-201ENST00000388948 TRBV10-2A0A0K0K1G8 114 aa11.11□□□□□ -0.63
LRRK1-201ENST00000388948 UBE2D3P61077 147 aa11.11□□□□□ -0.63
LRRK1-201ENST00000388948 GDF5OSQ5U4N7 250 aa11.11□□□□□ -0.63
LRRK1-201ENST00000388948 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
LRRK1-201ENST00000388948 NUPR2A6NF83 97 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 IGHV4-30-4P0DP06 118 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 IGKV2D-26A0A0A0MRZ7 120 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 MIAQ16674 131 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 ZNF80P51504 273 aaPredicted RBP11.1□□□□□ -0.63
LRRK1-201ENST00000388948 WDR87Q6ZQQ6 2873 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 KIR2DL5BA0A0G2JN68 375 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 KIR2DL5BA0A0G2JPC4 375 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 KIR2DL5AQ8N109 375 aa11.1□□□□□ -0.63
LRRK1-201ENST00000388948 H7C423 109 aa11.09□□□□□ -0.63
LRRK1-201ENST00000388948 E9PLD3 99 aa11.09□□□□□ -0.63
LRRK1-201ENST00000388948 Q8N976 141 aa11.09□□□□□ -0.63
LRRK1-201ENST00000388948 RAI1Q7Z5J4 1906 aaPredicted RBP11.09□□□□□ -0.63
LRRK1-201ENST00000388948 ACYP1P07311 99 aa11.09□□□□□ -0.63
LRRK1-201ENST00000388948 EBI3Q14213 229 aa11.09□□□□□ -0.63
LRRK1-201ENST00000388948 CDSNQ15517 529 aa11.09□□□□□ -0.63
LRRK1-201ENST00000388948 TMEM258P61165 79 aa11.09□□□□□ -0.63
LRRK1-201ENST00000388948 CFAP126Q5VTH2 177 aa11.09□□□□□ -0.63
LRRK1-201ENST00000388948 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
LRRK1-201ENST00000388948 ANKRD39Q53RE8 183 aa11.08□□□□□ -0.64
LRRK1-201ENST00000388948 C10orf91Q5T1B1 145 aa11.08□□□□□ -0.64
LRRK1-201ENST00000388948 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms