RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SLC25A29Q8N8R3 303 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 LINC01587Q99440 93 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
SCFD2-201ENST00000388940 DNAJC9-AS1A6NH13 148 aa10.88□□□□□ -0.67
SCFD2-201ENST00000388940 PROK1P58294 105 aa10.88□□□□□ -0.67
SCFD2-201ENST00000388940 FHL3Q13643 280 aa10.88□□□□□ -0.67
SCFD2-201ENST00000388940 IGHV3-73A0A0B4J1V6 119 aa10.88□□□□□ -0.67
SCFD2-201ENST00000388940 ZNF22P17026 224 aaPredicted RBP10.88□□□□□ -0.67
SCFD2-201ENST00000388940 DNAJC30Q96LL9 226 aa10.88□□□□□ -0.67
SCFD2-201ENST00000388940 CENPEQ02224 2701 aa10.87□□□□□ -0.67
SCFD2-201ENST00000388940 PRM2P04554 102 aa10.87□□□□□ -0.67
SCFD2-201ENST00000388940 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
SCFD2-201ENST00000388940 WFDC11Q8NEX6 87 aa10.87□□□□□ -0.67
SCFD2-201ENST00000388940 CD28P10747 220 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 FAM104AQ969W3 186 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 RS1O15537 224 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 IGHV3-53P01767 116 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 IGHV3-30P01768 117 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 IGHV3-30-5P0DP03 117 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 GAGE5Q13069 117 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 GAGE6Q13070 117 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 ODF3L2Q3SX64 289 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 ABCA12Q86UK0 2595 aa10.86□□□□□ -0.67
SCFD2-201ENST00000388940 A0A0J9YXV3 536 aa10.85□□□□□ -0.67
SCFD2-201ENST00000388940 Q6ZSN1 163 aa10.85□□□□□ -0.67
SCFD2-201ENST00000388940 SS18L2Q9UHA2 77 aa10.85□□□□□ -0.67
SCFD2-201ENST00000388940 MRPS36P82909 103 aaKnown RBP10.84□□□□□ -0.67
SCFD2-201ENST00000388940 WFDC2Q14508 124 aa10.84□□□□□ -0.67
SCFD2-201ENST00000388940 CHCHD7Q9BUK0 85 aa10.84□□□□□ -0.67
SCFD2-201ENST00000388940 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
SCFD2-201ENST00000388940 CCL24O00175 119 aa10.84□□□□□ -0.67
SCFD2-201ENST00000388940 ESM1Q9NQ30 184 aa10.84□□□□□ -0.67
SCFD2-201ENST00000388940 NDUFA11Q86Y39 141 aa10.83□□□□□ -0.68
SCFD2-201ENST00000388940 H3BMG7 143 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 SPINK8P0C7L1 97 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 HIST2H2BDQ6DRA6 164 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 STHQ8IWL8 128 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 IL17DQ8TAD2 202 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 APCP25054 2843 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 RNF183Q96D59 192 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 Q9UF83 564 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 UBE2D4Q9Y2X8 147 aa10.82□□□□□ -0.68
SCFD2-201ENST00000388940 ETDBQ3ZM63 59 aa10.81□□□□□ -0.68
SCFD2-201ENST00000388940 C1orf158Q8N1D5 194 aa10.81□□□□□ -0.68
SCFD2-201ENST00000388940 PRO0461Q9UI25 63 aa10.81□□□□□ -0.68
SCFD2-201ENST00000388940 HERV-K104P63124 156 aa10.81□□□□□ -0.68
SCFD2-201ENST00000388940 GAGE13Q4V321 117 aa10.81□□□□□ -0.68
SCFD2-201ENST00000388940 ATP6V0E2Q8NHE4 81 aa10.81□□□□□ -0.68
SCFD2-201ENST00000388940 C16orf95Q9H693 158 aa10.81□□□□□ -0.68
SCFD2-201ENST00000388940 XCL2Q9UBD3 114 aa10.81□□□□□ -0.68
SCFD2-201ENST00000388940 CFC1BP0CG36 223 aa10.8□□□□□ -0.68
SCFD2-201ENST00000388940 CFC1P0CG37 223 aa10.8□□□□□ -0.68
SCFD2-201ENST00000388940 CMC4P56277 68 aaPredicted RBP10.8□□□□□ -0.68
SCFD2-201ENST00000388940 UBE2D3P61077 147 aa10.8□□□□□ -0.68
SCFD2-201ENST00000388940 UBE2D2P62837 147 aa10.8□□□□□ -0.68
SCFD2-201ENST00000388940 MYO9AB2RTY4 2548 aa10.8□□□□□ -0.68
SCFD2-201ENST00000388940 TINCRA0A1B0GVN0 87 aa10.8□□□□□ -0.68
SCFD2-201ENST00000388940 APOMO95445 188 aa10.8□□□□□ -0.68
SCFD2-201ENST00000388940 SH2D6Q7Z4S9 175 aa10.8□□□□□ -0.68
SCFD2-201ENST00000388940 A0A1W2PRX2 142 aa10.79□□□□□ -0.68
SCFD2-201ENST00000388940 KRTAP1-1Q07627 177 aa10.79□□□□□ -0.68
SCFD2-201ENST00000388940 CEMP1Q6PRD7 247 aaPredicted RBP10.79□□□□□ -0.68
SCFD2-201ENST00000388940 ITPR3Q14573 2671 aa10.79□□□□□ -0.68
SCFD2-201ENST00000388940 IGHV3-30-3P0DP02 117 aa10.78□□□□□ -0.68
SCFD2-201ENST00000388940 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
SCFD2-201ENST00000388940 TIMM21Q9BVV7 248 aa10.78□□□□□ -0.68
SCFD2-201ENST00000388940 CDIP1Q9H305 208 aa10.78□□□□□ -0.68
SCFD2-201ENST00000388940 RNASE1P07998 156 aaKnown RBP10.78□□□□□ -0.68
SCFD2-201ENST00000388940 C11orf44Q8N8P7 122 aa10.78□□□□□ -0.68
SCFD2-201ENST00000388940 CITED2Q99967 270 aaPredicted RBP10.78□□□□□ -0.68
SCFD2-201ENST00000388940 ANAPC13Q9BS18 74 aa10.78□□□□□ -0.68
SCFD2-201ENST00000388940 AKAP9Q99996 3911 aa10.77□□□□□ -0.68
SCFD2-201ENST00000388940 IGHV1-58A0A0C4DH39 117 aa10.77□□□□□ -0.68
SCFD2-201ENST00000388940 C10orf126Q8N4M7 172 aa10.77□□□□□ -0.68
SCFD2-201ENST00000388940 LINC01006Q8NI28 216 aa10.77□□□□□ -0.68
SCFD2-201ENST00000388940 IGHV3-64A0A075B6Q5 118 aa10.77□□□□□ -0.69
SCFD2-201ENST00000388940 PRO1854Q9UHT4 67 aa10.77□□□□□ -0.69
SCFD2-201ENST00000388940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
SCFD2-201ENST00000388940 A0A0J9YXY3 114 aa10.76□□□□□ -0.69
SCFD2-201ENST00000388940 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
SCFD2-201ENST00000388940 FOXI1Q12951 378 aa10.76□□□□□ -0.69
SCFD2-201ENST00000388940 Q6ZUT4 128 aa10.76□□□□□ -0.69
SCFD2-201ENST00000388940 ZNF469Q96JG9 3925 aaPredicted RBP10.76□□□□□ -0.69
SCFD2-201ENST00000388940 IGHV3-38A0A0C4DH36 116 aa10.75□□□□□ -0.69
SCFD2-201ENST00000388940 TMEM263Q8WUH6 116 aaKnown RBP10.75□□□□□ -0.69
SCFD2-201ENST00000388940 C1QTNF4Q9BXJ3 329 aa10.75□□□□□ -0.69
SCFD2-201ENST00000388940 A0A0B4J2C4 111 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 LOC107984156A0A0G2JMH3 177 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 TRBV10-1A0A0K0K1A3 114 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 A4D1N5 150 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 MUSTN1Q8IVN3 82 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 ARL17AQ8IVW1 177 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 VSIG2Q96IQ7 327 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 YAE1D1Q9NRH1 226 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 TRBV20-1A0A075B6N2 111 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 IGHV3OR16-12A0A075B7B8 117 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 TRGV1A0A0A0MS02 117 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 MT-ATP8P03928 68 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 INSL3P51460 131 aa10.74□□□□□ -0.69
SCFD2-201ENST00000388940 TIRAPP58753 221 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms