RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 MED11Q9P086 117 aa-2.24□□□□□ -2.77
RNU6-1040P-201ENST00000383974 SCP2D1Q9UJQ7 156 aa-2.24□□□□□ -2.77
RNU6-1040P-201ENST00000383974 NUP210Q8TEM1 1887 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-1040P-201ENST00000383974 ZNF142P52746 1687 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 ARAP1Q96P48 1450 aa-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 A0A087WVE0 104 aa-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 A0A1B0GW64 132 aa-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 NPFFO15130 113 aa-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 SSSCA1O60232 199 aa-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 S100A6P06703 90 aa-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 MAFIPQ8WZ33 124 aa-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 TECPR2O15040 1411 aa-2.25□□□□□ -2.77
RNU6-1040P-201ENST00000383974 WDR97A6NE52 1622 aa-2.26□□□□□ -2.77
RNU6-1040P-201ENST00000383974 CRYGSP22914 178 aa-2.26□□□□□ -2.77
RNU6-1040P-201ENST00000383974 ASIPP42127 132 aa-2.26□□□□□ -2.77
RNU6-1040P-201ENST00000383974 LSM3P62310 102 aaKnown RBP-2.26□□□□□ -2.77
RNU6-1040P-201ENST00000383974 BASP1P80723 227 aaKnown RBP-2.26□□□□□ -2.77
RNU6-1040P-201ENST00000383974 IFI27L1Q96BM0 104 aa-2.26□□□□□ -2.77
RNU6-1040P-201ENST00000383974 CRYBG3Q68DQ2 2970 aa-2.26□□□□□ -2.77
RNU6-1040P-201ENST00000383974 LRP6O75581 1613 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 CFAP54Q96N23 3096 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 MAP1LC3B2A6NCE7 125 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 IFNGP01579 166 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 HBDP02042 147 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 SRP9P49458 86 aaKnown RBP-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 CRYBA4P53673 196 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 RGS21Q2M5E4 152 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 CFAP126Q5VTH2 177 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 SBF2Q86WG5 1849 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 GAPVD1Q14C86 1478 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 ERCC6L2Q5T890 1561 aa-2.27□□□□□ -2.77
RNU6-1040P-201ENST00000383974 WDFY3Q8IZQ1 3526 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 PHIPQ8WWQ0 1821 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 KIF13AQ9H1H9 1805 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 CPSF4LA6NMK7 179 aaKnown RBP-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 YPEL1O60688 119 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 S100A3P33764 101 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 NPC2P61916 151 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 ALX1Q15699 326 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 NDUFA11Q86Y39 141 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 GINS3Q9BRX5 216 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 SCN3BQ9NY72 215 aa-2.28□□□□□ -2.77
RNU6-1040P-201ENST00000383974 PPP5D1E7EU14 171 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 PGRMC1O00264 195 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 SLC25A6P12236 298 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 S100A11P31949 105 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 CLPSL2Q6UWE3 100 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 SLC25A26Q70HW3 274 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 OR13C6PQ8NH95 151 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 CFAP53Q96M91 514 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 NDUFAF1Q9Y375 327 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 KDM5AP29375 1690 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 FMN2Q9NZ56 1722 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 KDM3BQ7LBC6 1761 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 WNK3Q9BYP7 1800 aa-2.29□□□□□ -2.78
RNU6-1040P-201ENST00000383974 FER1L6Q2WGJ9 1857 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 CICQ96RK0 1608 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 ZMYM4Q5VZL5 1548 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 FAM92AA1XBS5 289 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 NIPSNAP2O75323 286 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 UBE2D3P61077 147 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 PCBD1P61457 104 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 UBE2D2P62837 147 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 C3orf33Q6P1S2 294 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 BRK1Q8WUW1 75 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 NAA60Q9H7X0 242 aa-2.3□□□□□ -2.78
RNU6-1040P-201ENST00000383974 ZNF609O15014 1411 aa-2.31□□□□□ -2.78
RNU6-1040P-201ENST00000383974 TRAV1-2A0A0B4J238 106 aa-2.31□□□□□ -2.78
RNU6-1040P-201ENST00000383974 DEFB4AO15263 64 aa-2.31□□□□□ -2.78
RNU6-1040P-201ENST00000383974 IFNA1P01562 189 aa-2.31□□□□□ -2.78
RNU6-1040P-201ENST00000383974 LXNQ9BS40 222 aa-2.31□□□□□ -2.78
RNU6-1040P-201ENST00000383974 TAS2R8Q9NYW2 309 aa-2.31□□□□□ -2.78
RNU6-1040P-201ENST00000383974 CAMSAP1Q5T5Y3 1602 aa-2.31□□□□□ -2.78
RNU6-1040P-201ENST00000383974 PNMA8CA0A1B0GUJ8 204 aa-2.32□□□□□ -2.78
RNU6-1040P-201ENST00000383974 CTXN2P0C2S0 81 aa-2.32□□□□□ -2.78
RNU6-1040P-201ENST00000383974 COX8AP10176 69 aa-2.32□□□□□ -2.78
RNU6-1040P-201ENST00000383974 DHRS4L2Q6PKH6 230 aa-2.32□□□□□ -2.78
RNU6-1040P-201ENST00000383974 SNX29P2Q8IUI4 249 aa-2.32□□□□□ -2.78
RNU6-1040P-201ENST00000383974 WFDC9Q8NEX5 89 aa-2.32□□□□□ -2.78
RNU6-1040P-201ENST00000383974 DYDC1Q8WWB3 177 aa-2.32□□□□□ -2.78
RNU6-1040P-201ENST00000383974 CEP350Q5VT06 3117 aa-2.32□□□□□ -2.78
RNU6-1040P-201ENST00000383974 TRAV2A0A0B4J234 112 aa-2.33□□□□□ -2.78
RNU6-1040P-201ENST00000383974 TRBV7-6A0A0J9YX20 115 aa-2.33□□□□□ -2.78
RNU6-1040P-201ENST00000383974 SYS1-DBNDD2H3BUS1 97 aa-2.33□□□□□ -2.78
RNU6-1040P-201ENST00000383974 M0QZK8 103 aa-2.33□□□□□ -2.78
RNU6-1040P-201ENST00000383974 Q5VV11 94 aa-2.33□□□□□ -2.78
RNU6-1040P-201ENST00000383974 WFDC6Q9BQY6 131 aa-2.33□□□□□ -2.78
RNU6-1040P-201ENST00000383974 CBLN4Q9NTU7 201 aa-2.33□□□□□ -2.78
RNU6-1040P-201ENST00000383974 PAPPA2Q9BXP8 1791 aa-2.33□□□□□ -2.78
RNU6-1040P-201ENST00000383974 MYH3P11055 1940 aa-2.34□□□□□ -2.78
RNU6-1040P-201ENST00000383974 ARHGEF5Q12774 1597 aa-2.34□□□□□ -2.78
RNU6-1040P-201ENST00000383974 J3KT08 172 aa-2.34□□□□□ -2.78
RNU6-1040P-201ENST00000383974 PLGLB1Q02325 96 aa-2.34□□□□□ -2.78
RNU6-1040P-201ENST00000383974 FAM24BQ8N5W8 94 aa-2.34□□□□□ -2.78
RNU6-1040P-201ENST00000383974 LAMTOR2Q9Y2Q5 125 aa-2.34□□□□□ -2.78
RNU6-1040P-201ENST00000383974 BCORQ6W2J9 1755 aa-2.34□□□□□ -2.78
RNU6-1040P-201ENST00000383974 PTPRMP28827 1452 aa-2.34□□□□□ -2.78
RNU6-1040P-201ENST00000383974 HMGXB3Q12766 1538 aa-2.35□□□□□ -2.79
RNU6-1040P-201ENST00000383974 UQCRQO14949 82 aa-2.35□□□□□ -2.79
RNU6-1040P-201ENST00000383974 PITX3O75364 302 aa-2.35□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms