RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 TRBV7-9A0A0J9YWB2 115 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 A0A0J9YX75 114 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 TEX48A0A1B0GUV7 120 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 SDHAF1A6NFY7 115 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 IGIPA6NJ69 53 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 K7EQG2 157 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 LGALS9O00182 355 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 PPP1R17O96001 155 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 VPREB1P12018 145 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 COX6B1P14854 86 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 HTN1P15515 57 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 TSPEAR-AS2P59090 65 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 SEC61BP60468 96 aaKnown RBP2.7□□□□□ -1.98
SMC6-202ENST00000381272 SRSF9Q13242 221 aaKnown RBP eCLIP2.7□□□□□ -1.98
SMC6-202ENST00000381272 PMVKQ15126 192 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 RRN3P1Q2M238 152 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 SH2D6Q7Z4S9 175 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 C9orf85Q96MD7 179 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 KIR2DL4Q99706 377 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 CFAP46Q8IYW2 2715 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 ZANQ9Y493 2812 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.7□□□□□ -1.984e-12■■■■■ 45.5
SMC6-202ENST00000381272 IGHV3-73A0A0B4J1V6 119 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 LINC01549A6NIU2 74 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 KNCNA6PVL3 124 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 LINC01619G3V211 115 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 M0QY20 66 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 APOMO95445 188 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 SNRPD3P62318 126 aaKnown RBP2.7□□□□□ -1.98
SMC6-202ENST00000381272 DEFB136Q30KP8 78 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 TMEM170BQ5T4T1 132 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 ZNRF2Q8NHG8 242 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 TMEM141Q96I45 108 aa2.7□□□□□ -1.98
SMC6-202ENST00000381272 SORL1Q92673 2214 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 MXRA5Q9NR99 2828 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 SPG11Q96JI7 2443 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 DOPEY2Q9Y3R5 2298 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 IGHV3-64A0A075B6Q5 118 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 LOC107984156A0A0G2JMH3 177 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 A0A0J9YY99 117 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 TRBV6-5A0A0K0K1A5 114 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 TRBV27A0A0K0K1C4 114 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 A0A1B0GWB2 263 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 F8W1H4 67 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 PRB1P04280 392 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 RBMY1A1P0DJD3 496 aaKnown RBP2.69□□□□□ -1.98
SMC6-202ENST00000381272 RBMY1CP0DJD4 496 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 P0DMU3 169 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 FAM231AP0DMU4 169 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 FAM231CP0DMU5 169 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 PSMB2P49721 201 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 HERVK_113P61574 105 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 RPL32P62910 135 aaKnown RBP2.69□□□□□ -1.98
SMC6-202ENST00000381272 RBMY1FQ15415 496 aaKnown RBP2.69□□□□□ -1.98
SMC6-202ENST00000381272 ETDBQ3ZM63 59 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 ZNF876PQ49A33 203 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 TCTEX1D4Q5JR98 221 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 TRPT1Q86TN4 253 aaKnown RBP2.69□□□□□ -1.98
SMC6-202ENST00000381272 ARL17AQ8IVW1 177 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 DUX3Q96PT4 197 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 SPANXB1Q9NS25 103 aaPredicted RBP2.69□□□□□ -1.98
SMC6-202ENST00000381272 MRPL16Q9NX20 251 aaKnown RBP2.69□□□□□ -1.98
SMC6-202ENST00000381272 TSSC4Q9Y5U2 329 aaPredicted RBP2.69□□□□□ -1.98
SMC6-202ENST00000381272 CSPG4Q6UVK1 2322 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 FBN2P35556 2912 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 IGSF10Q6WRI0 2623 aa2.69□□□□□ -1.98
SMC6-202ENST00000381272 CR1P17927 2039 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 A0A096LNT2 108 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 A0A0J9YXV3 536 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 CYSRT1A8MQ03 144 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 J3QQQ9 107 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 TSPAN13O95857 204 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 LGALS3P17931 250 aaKnown RBP2.68□□□□□ -1.98
SMC6-202ENST00000381272 INSL3P51460 131 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 DEFB131AP59861 70 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 SAMD13Q5VXD3 122 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 CEMP1Q6PRD7 247 aaPredicted RBP2.68□□□□□ -1.98
SMC6-202ENST00000381272 ODF3Q96PU9 254 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 TIMM17AQ99595 171 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 SPAG8Q99932 426 aaPredicted RBP2.68□□□□□ -1.98
SMC6-202ENST00000381272 ZNF702PQ9H963 129 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 Q9UF83 564 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 PRO0461Q9UI25 63 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 PKD1L2Q7Z442 2459 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 TMEM89A2RUT3 159 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 RBMY1BA6NDE4 496 aaKnown RBP2.68□□□□□ -1.98
SMC6-202ENST00000381272 RBMY1EA6NEQ0 496 aaKnown RBP2.68□□□□□ -1.98
SMC6-202ENST00000381272 I3L3M4 83 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 CCL24O00175 119 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 IGHV3-30P01768 117 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 RBMY1DP0C7P1 496 aaKnown RBP2.68□□□□□ -1.98
SMC6-202ENST00000381272 CFC1BP0CG36 223 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 CFC1P0CG37 223 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 IGHV3-30-5P0DP03 117 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 IGHV4-31P0DP07 118 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 UBE2D1P51668 147 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 NSUN5P1Q3KNT7 163 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 RNASE13Q5GAN3 156 aaKnown RBP2.68□□□□□ -1.98
SMC6-202ENST00000381272 NDUFA11Q86Y39 141 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 C20orf203Q8NBC4 194 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms