RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 KLK12Q9UKR0 248 aa12.79□□□□□ -0.36
COL4A3BP-203ENST00000380494 ALPK3Q96L96 1907 aa12.79□□□□□ -0.36
COL4A3BP-203ENST00000380494 SHANK1Q9Y566 2161 aa12.78□□□□□ -0.36
COL4A3BP-203ENST00000380494 K7EQG2 157 aa12.78□□□□□ -0.36
COL4A3BP-203ENST00000380494 DAZAP2Q15038 168 aaPredicted RBP12.78□□□□□ -0.36
COL4A3BP-203ENST00000380494 CEP250Q9BV73 2442 aa12.78□□□□□ -0.36
COL4A3BP-203ENST00000380494 CNFNQ9BYD5 112 aa12.78□□□□□ -0.36
COL4A3BP-203ENST00000380494 SMIM26A0A096LP01 95 aa12.77□□□□□ -0.36
COL4A3BP-203ENST00000380494 REG3AQ06141 175 aa12.77□□□□□ -0.36
COL4A3BP-203ENST00000380494 TSHBP01222 138 aa12.77□□□□□ -0.36
COL4A3BP-203ENST00000380494 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.37
COL4A3BP-203ENST00000380494 B9D2Q9BPU9 175 aa12.77□□□□□ -0.37
COL4A3BP-203ENST00000380494 EBI3Q14213 229 aa12.77□□□□□ -0.37
COL4A3BP-203ENST00000380494 LYRM9A8MSI8 78 aa12.76□□□□□ -0.37
COL4A3BP-203ENST00000380494 ZNF318Q5VUA4 2279 aa12.76□□□□□ -0.37
COL4A3BP-203ENST00000380494 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
COL4A3BP-203ENST00000380494 FBXL19-AS1Q494R0 122 aa12.76□□□□□ -0.37
COL4A3BP-203ENST00000380494 FAM19A3Q7Z5A8 133 aa12.76□□□□□ -0.37
COL4A3BP-203ENST00000380494 SERP1Q9Y6X1 66 aa12.76□□□□□ -0.37
COL4A3BP-203ENST00000380494 INTS1Q8N201 2190 aaKnown RBP12.75□□□□□ -0.37
COL4A3BP-203ENST00000380494 DEFB113Q30KQ7 82 aa12.75□□□□□ -0.37
COL4A3BP-203ENST00000380494 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
COL4A3BP-203ENST00000380494 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
COL4A3BP-203ENST00000380494 PRR15LQ9BU68 103 aa12.74□□□□□ -0.37
COL4A3BP-203ENST00000380494 ZNF407Q9C0G0 2248 aa12.74□□□□□ -0.37
COL4A3BP-203ENST00000380494 LINC00269Q8N2A0 174 aa12.74□□□□□ -0.37
COL4A3BP-203ENST00000380494 Q6ZTI0 123 aa12.74□□□□□ -0.37
COL4A3BP-203ENST00000380494 URB1-AS1Q96HZ7 61 aa12.73□□□□□ -0.37
COL4A3BP-203ENST00000380494 IGKV4-1P06312 121 aa12.73□□□□□ -0.37
COL4A3BP-203ENST00000380494 Q6ZS46 218 aa12.73□□□□□ -0.37
COL4A3BP-203ENST00000380494 ADORA2A-AS1P86434 159 aa12.73□□□□□ -0.37
COL4A3BP-203ENST00000380494 POLR2KP53803 58 aaKnown RBP12.73□□□□□ -0.37
COL4A3BP-203ENST00000380494 WFDC11Q8NEX6 87 aa12.73□□□□□ -0.37
COL4A3BP-203ENST00000380494 SNURFQ9Y675 71 aa12.73□□□□□ -0.37
COL4A3BP-203ENST00000380494 F8W735 103 aaPredicted RBP12.72□□□□□ -0.37
COL4A3BP-203ENST00000380494 TMEM131Q92545 1883 aa12.72□□□□□ -0.37
COL4A3BP-203ENST00000380494 ADAMTS9Q9P2N4 1935 aa12.72□□□□□ -0.37
COL4A3BP-203ENST00000380494 ESM1Q9NQ30 184 aa12.72□□□□□ -0.37
COL4A3BP-203ENST00000380494 KIF26AQ9ULI4 1882 aaPredicted RBP12.72□□□□□ -0.37
COL4A3BP-203ENST00000380494 TRBV6-4A0A1B0GX49 114 aa12.72□□□□□ -0.37
COL4A3BP-203ENST00000380494 TNFRSF13BO14836 293 aaPredicted RBP12.72□□□□□ -0.37
COL4A3BP-203ENST00000380494 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.37
COL4A3BP-203ENST00000380494 HRCT1Q6UXD1 115 aa12.71□□□□□ -0.37
COL4A3BP-203ENST00000380494 SPTA1P02549 2419 aa12.71□□□□□ -0.37
COL4A3BP-203ENST00000380494 C6orf99Q4VX62 202 aa12.71□□□□□ -0.38
COL4A3BP-203ENST00000380494 RNASE3P12724 160 aaKnown RBP12.7□□□□□ -0.38
COL4A3BP-203ENST00000380494 UBE2D3P61077 147 aa12.7□□□□□ -0.38
COL4A3BP-203ENST00000380494 UBE2D2P62837 147 aa12.7□□□□□ -0.38
COL4A3BP-203ENST00000380494 CSDC2Q9Y534 153 aaKnown RBP12.7□□□□□ -0.38
COL4A3BP-203ENST00000380494 TRBV6-8A0A0A6YYG3 113 aa12.7□□□□□ -0.38
COL4A3BP-203ENST00000380494 SHISA2Q6UWI4 295 aa12.7□□□□□ -0.38
COL4A3BP-203ENST00000380494 ARFGEF3Q5TH69 2177 aa12.7□□□□□ -0.38
COL4A3BP-203ENST00000380494 CCKP06307 115 aa12.7□□□□□ -0.38
COL4A3BP-203ENST00000380494 TRAV7A0A075B6U4 112 aa12.69□□□□□ -0.38
COL4A3BP-203ENST00000380494 UBE2D1P51668 147 aa12.69□□□□□ -0.38
COL4A3BP-203ENST00000380494 SMIM11BQ8TCY0 68 aa12.69□□□□□ -0.38
COL4A3BP-203ENST00000380494 MUC7Q8TAX7 377 aa12.69□□□□□ -0.38
COL4A3BP-203ENST00000380494 CACNA1EQ15878 2313 aa12.68□□□□□ -0.38
COL4A3BP-203ENST00000380494 LINC01548A6NM66 108 aa12.68□□□□□ -0.38
COL4A3BP-203ENST00000380494 COX17Q14061 63 aa12.68□□□□□ -0.38
COL4A3BP-203ENST00000380494 FAM19A5Q7Z5A7 132 aaPredicted RBP12.68□□□□□ -0.38
COL4A3BP-203ENST00000380494 C9orf85Q96MD7 179 aa12.68□□□□□ -0.38
COL4A3BP-203ENST00000380494 NOTCH4Q99466 2003 aa12.67□□□□□ -0.38
COL4A3BP-203ENST00000380494 DEFB135Q30KP9 77 aa12.67□□□□□ -0.38
COL4A3BP-203ENST00000380494 APC2O95996 2303 aa12.67□□□□□ -0.38
COL4A3BP-203ENST00000380494 IGIPA6NJ69 53 aa12.67□□□□□ -0.38
COL4A3BP-203ENST00000380494 MIFP14174 115 aa12.66□□□□□ -0.38
COL4A3BP-203ENST00000380494 CEP290O15078 2479 aa12.66□□□□□ -0.38
COL4A3BP-203ENST00000380494 KLLNB2CW77 178 aa12.66□□□□□ -0.38
COL4A3BP-203ENST00000380494 C14orf177Q52M58 125 aa12.66□□□□□ -0.38
COL4A3BP-203ENST00000380494 C11orf21Q9P2W6 132 aa12.66□□□□□ -0.38
COL4A3BP-203ENST00000380494 NRGNQ92686 78 aa12.66□□□□□ -0.38
COL4A3BP-203ENST00000380494 COL4A4P53420 1690 aaPredicted RBP12.65□□□□□ -0.38
COL4A3BP-203ENST00000380494 A8MZ25 164 aa12.64□□□□□ -0.39
COL4A3BP-203ENST00000380494 DHRS4-AS1Q9P1J3 65 aa12.64□□□□□ -0.39
COL4A3BP-203ENST00000380494 DEFB114Q30KQ6 69 aa12.63□□□□□ -0.39
COL4A3BP-203ENST00000380494 NUP210LQ5VU65 1888 aa12.63□□□□□ -0.39
COL4A3BP-203ENST00000380494 LMO4P61968 165 aa12.63□□□□□ -0.39
COL4A3BP-203ENST00000380494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.63□□□□□ -0.39
COL4A3BP-203ENST00000380494 PRR9Q5T870 116 aa12.63□□□□□ -0.39
COL4A3BP-203ENST00000380494 ARHGAP21Q5T5U3 1957 aa12.62□□□□□ -0.39
COL4A3BP-203ENST00000380494 A6NED7 52 aa12.62□□□□□ -0.39
COL4A3BP-203ENST00000380494 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
COL4A3BP-203ENST00000380494 A0A1W2PNU3 283 aaPredicted RBP12.62□□□□□ -0.39
COL4A3BP-203ENST00000380494 GAS8-AS1O95177 125 aa12.62□□□□□ -0.39
COL4A3BP-203ENST00000380494 MALRD1Q5VYJ5 2156 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 AKAP6Q13023 2319 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 IGLV4-69A0A075B6H9 119 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 CD164L2Q6UWJ8 174 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 Q6ZQY7 126 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 M0R378 163 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 CASC2Q6XLA1 102 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 WFDC10BQ8IUB3 73 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 Q8N6K4 173 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 PSMG3-AS1Q96PY0 264 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 CRYGDP07320 174 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 PROK1P58294 105 aa12.61□□□□□ -0.39
COL4A3BP-203ENST00000380494 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
COL4A3BP-203ENST00000380494 K7ERS5 55 aa12.6□□□□□ -0.39
COL4A3BP-203ENST00000380494 POM121L12Q8N7R1 296 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms