RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 COTL1Q14019 142 aa14.65□□□□□ -0.06
U2AF1-202ENST00000380276 ZNF345Q14585 488 aa14.64□□□□□ -0.07
U2AF1-202ENST00000380276 MANBALQ9NQG1 85 aa14.64□□□□□ -0.07
U2AF1-202ENST00000380276 NIT2Q9NQR4 276 aa14.64□□□□□ -0.07
U2AF1-202ENST00000380276 XKRY2A2RUG3 117 aa14.63□□□□□ -0.07
U2AF1-202ENST00000380276 HIGD2BQ4VC39 106 aa14.63□□□□□ -0.07
U2AF1-202ENST00000380276 CFAP161Q6P656 301 aa14.63□□□□□ -0.07
U2AF1-202ENST00000380276 PGLYRP4Q96LB8 373 aa14.63□□□□□ -0.07
U2AF1-202ENST00000380276 IGKV2-24A0A0C4DH68 120 aa14.62□□□□□ -0.07
U2AF1-202ENST00000380276 COX6A2Q02221 97 aa14.62□□□□□ -0.07
U2AF1-202ENST00000380276 MAJINQ3KP22 176 aa14.62□□□□□ -0.07
U2AF1-202ENST00000380276 GTSF1Q8WW33 167 aa14.62□□□□□ -0.07
U2AF1-202ENST00000380276 C11orf52Q96A22 123 aa14.62□□□□□ -0.07
U2AF1-202ENST00000380276 RAB19A4D1S5 217 aa14.61□□□□□ -0.07
U2AF1-202ENST00000380276 BCL2L11O43521 198 aa14.61□□□□□ -0.07
U2AF1-202ENST00000380276 LYZL1Q6UWQ5 148 aa14.61□□□□□ -0.07
U2AF1-202ENST00000380276 C15orf56Q8N910 161 aa14.61□□□□□ -0.07
U2AF1-202ENST00000380276 PLAC8Q9NZF1 115 aa14.61□□□□□ -0.07
U2AF1-202ENST00000380276 F2Z2F3 143 aa14.6□□□□□ -0.07
U2AF1-202ENST00000380276 IFNA1P01562 189 aa14.6□□□□□ -0.07
U2AF1-202ENST00000380276 GNG4P50150 75 aa14.6□□□□□ -0.07
U2AF1-202ENST00000380276 EIF5AP63241 154 aaKnown RBP14.6□□□□□ -0.07
U2AF1-202ENST00000380276 CCL20P78556 96 aa14.6□□□□□ -0.07
U2AF1-202ENST00000380276 RGS21Q2M5E4 152 aa14.6□□□□□ -0.07
U2AF1-202ENST00000380276 C19orf71A6NCJ1 209 aa14.59□□□□□ -0.07
U2AF1-202ENST00000380276 NTF3P20783 257 aa14.59□□□□□ -0.07
U2AF1-202ENST00000380276 RPS10P46783 165 aaKnown RBP14.59□□□□□ -0.07
U2AF1-202ENST00000380276 AMMECR1LQ6DCA0 310 aa14.59□□□□□ -0.07
U2AF1-202ENST00000380276 NDUFS6O75380 124 aaKnown RBP14.58□□□□□ -0.08
U2AF1-202ENST00000380276 LYPD6BQ8NI32 183 aa14.58□□□□□ -0.08
U2AF1-202ENST00000380276 RNASEKQ6P5S7 137 aaKnown RBP14.57□□□□□ -0.08
U2AF1-202ENST00000380276 PRSS3P2Q8NHM4 247 aa14.57□□□□□ -0.08
U2AF1-202ENST00000380276 TWIST1Q15672 202 aa14.56□□□□□ -0.08
U2AF1-202ENST00000380276 STPG4Q8N801 248 aa14.56□□□□□ -0.08
U2AF1-202ENST00000380276 TEX46H3BTG2 121 aa14.55□□□□□ -0.08
U2AF1-202ENST00000380276 CHCHD10Q8WYQ3 142 aaPredicted RBP14.55□□□□□ -0.08
U2AF1-202ENST00000380276 TRAV26-2A0A0B4J265 109 aa14.54□□□□□ -0.08
U2AF1-202ENST00000380276 HMSDA8MTL9 139 aa14.54□□□□□ -0.08
U2AF1-202ENST00000380276 SMIM12Q96EX1 92 aa14.54□□□□□ -0.08
U2AF1-202ENST00000380276 BIN3Q9NQY0 253 aa14.54□□□□□ -0.08
U2AF1-202ENST00000380276 MED9Q9NWA0 146 aa14.54□□□□□ -0.08
U2AF1-202ENST00000380276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.53□□□□□ -0.08
U2AF1-202ENST00000380276 IGKV2-29A2NJV5 120 aaPredicted RBP14.53□□□□□ -0.08
U2AF1-202ENST00000380276 PRR3P79522 188 aaKnown RBP14.53□□□□□ -0.08
U2AF1-202ENST00000380276 GATD1Q8NB37 220 aa14.52□□□□□ -0.09
U2AF1-202ENST00000380276 PDE6DO43924 150 aa14.51□□□□□ -0.09
U2AF1-202ENST00000380276 APCSP02743 223 aa14.51□□□□□ -0.09
U2AF1-202ENST00000380276 MEF2BQ02080 365 aaPredicted RBP14.51□□□□□ -0.09
U2AF1-202ENST00000380276 Q6ZNX1 250 aa14.51□□□□□ -0.09
U2AF1-202ENST00000380276 CTRLP40313 264 aa14.5□□□□□ -0.09
U2AF1-202ENST00000380276 C9orf62Q8N4C0 152 aa14.5□□□□□ -0.09
U2AF1-202ENST00000380276 NUDT10Q8NFP7 164 aa14.5□□□□□ -0.09
U2AF1-202ENST00000380276 RPL39LQ96EH5 51 aaKnown RBP14.5□□□□□ -0.09
U2AF1-202ENST00000380276 NUDT11Q96G61 164 aa14.5□□□□□ -0.09
U2AF1-202ENST00000380276 LINC01600Q96MT4 127 aa14.5□□□□□ -0.09
U2AF1-202ENST00000380276 A0A096LNI7 61 aa14.49□□□□□ -0.09
U2AF1-202ENST00000380276 TRAV1-1A0A0B4J248 108 aa14.49□□□□□ -0.09
U2AF1-202ENST00000380276 ODF1Q14990 250 aa14.49□□□□□ -0.09
U2AF1-202ENST00000380276 SMIM15Q7Z3B0 74 aa14.49□□□□□ -0.09
U2AF1-202ENST00000380276 TRBV20OR9-2A0A075B6H5 130 aa14.48□□□□□ -0.09
U2AF1-202ENST00000380276 GVQW2A0A096LPI5 108 aaPredicted RBP14.48□□□□□ -0.09
U2AF1-202ENST00000380276 NCR2O95944 276 aa14.47□□□□□ -0.09
U2AF1-202ENST00000380276 FGF6P10767 208 aa14.47□□□□□ -0.09
U2AF1-202ENST00000380276 XCL1P47992 114 aa14.47□□□□□ -0.09
U2AF1-202ENST00000380276 RPP21Q9H633 154 aaKnown RBP14.47□□□□□ -0.09
U2AF1-202ENST00000380276 LRP2P98164 4655 aa14.47□□□□□ -0.09
U2AF1-202ENST00000380276 FOXI1Q12951 378 aa14.46□□□□□ -0.09
U2AF1-202ENST00000380276 EIF5AL1Q6IS14 154 aaKnown RBP14.46□□□□□ -0.09
U2AF1-202ENST00000380276 BTF3L4Q96K17 158 aa14.46□□□□□ -0.09
U2AF1-202ENST00000380276 RNASE7Q9H1E1 156 aaKnown RBP14.46□□□□□ -0.09
U2AF1-202ENST00000380276 TNXBP22105 4242 aa14.46□□□□□ -0.1
U2AF1-202ENST00000380276 LINC00526Q96FQ7 95 aa14.45□□□□□ -0.1
U2AF1-202ENST00000380276 TMEM101Q96IK0 257 aa14.45□□□□□ -0.1
U2AF1-202ENST00000380276 H7C423 109 aa14.44□□□□□ -0.1
U2AF1-202ENST00000380276 BCL2P10415 239 aa14.44□□□□□ -0.1
U2AF1-202ENST00000380276 PMCHP20382 165 aa14.44□□□□□ -0.1
U2AF1-202ENST00000380276 REG3GQ6UW15 175 aa14.44□□□□□ -0.1
U2AF1-202ENST00000380276 OR5A1Q8NGJ0 315 aa14.44□□□□□ -0.1
U2AF1-202ENST00000380276 LINC00474Q9P2X8 69 aa14.44□□□□□ -0.1
U2AF1-202ENST00000380276 PKIGQ9Y2B9 76 aa14.44□□□□□ -0.1
U2AF1-202ENST00000380276 SDHAF1A6NFY7 115 aa14.43□□□□□ -0.1
U2AF1-202ENST00000380276 CCL25O15444 150 aa14.43□□□□□ -0.1
U2AF1-202ENST00000380276 FOXA3P55318 350 aaPredicted RBP14.43□□□□□ -0.1
U2AF1-202ENST00000380276 CARD19Q96LW7 228 aa14.43□□□□□ -0.1
U2AF1-202ENST00000380276 CNFNQ9BYD5 112 aa14.43□□□□□ -0.1
U2AF1-202ENST00000380276 A0A0J9YXV3 536 aa14.42□□□□□ -0.1
U2AF1-202ENST00000380276 SPINK6Q6UWN8 80 aa14.42□□□□□ -0.1
U2AF1-202ENST00000380276 IGHV1-58A0A0C4DH39 117 aa14.41□□□□□ -0.1
U2AF1-202ENST00000380276 ZNF25P17030 456 aaPredicted RBP14.41□□□□□ -0.1
U2AF1-202ENST00000380276 TEX261Q6UWH6 196 aa14.4□□□□□ -0.1
U2AF1-202ENST00000380276 LINC00959A0A1B0GUT2 108 aa14.39□□□□□ -0.11
U2AF1-202ENST00000380276 I3L3M4 83 aa14.39□□□□□ -0.11
U2AF1-202ENST00000380276 K7EN84 100 aa14.39□□□□□ -0.11
U2AF1-202ENST00000380276 RNF213Q63HN8 5207 aa14.38□□□□□ -0.11
U2AF1-202ENST00000380276 ZNF561-AS1K7EIQ3 104 aa14.38□□□□□ -0.11
U2AF1-202ENST00000380276 SS18Q15532 418 aa14.38□□□□□ -0.11
U2AF1-202ENST00000380276 OCC1Q8TAD7 63 aa14.38□□□□□ -0.11
U2AF1-202ENST00000380276 Q6ZRP5 223 aa14.37□□□□□ -0.11
U2AF1-202ENST00000380276 TMEM242Q9NWH2 141 aa14.37□□□□□ -0.11
U2AF1-202ENST00000380276 GATCO43716 136 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms