RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 NAA38Q9BRA0 125 aaKnown RBP15.49■□□□□ 0.07
CNTFR-202ENST00000378980 RNASE8Q8TDE3 154 aaKnown RBP15.48■□□□□ 0.07
CNTFR-202ENST00000378980 PYGO1Q9Y3Y4 419 aa15.48■□□□□ 0.07
CNTFR-202ENST00000378980 PHLDA1Q8WV24 401 aaPredicted RBP15.48■□□□□ 0.07
CNTFR-202ENST00000378980 DNAJC30Q96LL9 226 aa15.48■□□□□ 0.07
CNTFR-202ENST00000378980 FAM110AQ9BQ89 295 aa15.48■□□□□ 0.07
CNTFR-202ENST00000378980 NHP2Q9NX24 153 aaKnown RBP15.48■□□□□ 0.07
CNTFR-202ENST00000378980 K7ERJ3 54 aa15.47■□□□□ 0.07
CNTFR-202ENST00000378980 GAGE10A6NGK3 116 aa15.46■□□□□ 0.07
CNTFR-202ENST00000378980 VCX2Q9H322 139 aa15.46■□□□□ 0.07
CNTFR-202ENST00000378980 A0A1W2PPM0 123 aa15.45■□□□□ 0.06
CNTFR-202ENST00000378980 FAM104AQ969W3 186 aa15.45■□□□□ 0.06
CNTFR-202ENST00000378980 PLEKHB2Q96CS7 222 aa15.45■□□□□ 0.06
CNTFR-202ENST00000378980 C19orf73Q9NVV2 129 aa15.45■□□□□ 0.06
CNTFR-202ENST00000378980 JMJD1CQ15652 2540 aa15.45■□□□□ 0.06
CNTFR-202ENST00000378980 GIG44P09565 113 aaPredicted RBP15.45■□□□□ 0.06
CNTFR-202ENST00000378980 TMEM263Q8WUH6 116 aaKnown RBP15.45■□□□□ 0.06
CNTFR-202ENST00000378980 CHCHD7Q9BUK0 85 aa15.45■□□□□ 0.06
CNTFR-202ENST00000378980 WFDC10AQ9H1F0 79 aa15.45■□□□□ 0.06
CNTFR-202ENST00000378980 TRGV1A0A0A0MS02 117 aa15.44■□□□□ 0.06
CNTFR-202ENST00000378980 LY6G6DO95868 133 aa15.44■□□□□ 0.06
CNTFR-202ENST00000378980 TSPEAR-AS2P59090 65 aa15.44■□□□□ 0.06
CNTFR-202ENST00000378980 SCGB1D4Q6XE38 83 aa15.44■□□□□ 0.06
CNTFR-202ENST00000378980 GTF2H5Q6ZYL4 71 aa15.44■□□□□ 0.06
CNTFR-202ENST00000378980 HECTD1Q9ULT8 2610 aa15.44■□□□□ 0.06
CNTFR-202ENST00000378980 AMELXQ99217 191 aa15.44■□□□□ 0.06
CNTFR-202ENST00000378980 K7EP34 96 aa15.43■□□□□ 0.06
CNTFR-202ENST00000378980 CRYBA4P53673 196 aa15.43■□□□□ 0.06
CNTFR-202ENST00000378980 TMEM223A0PJW6 202 aa15.42■□□□□ 0.06
CNTFR-202ENST00000378980 ZNF22P17026 224 aaPredicted RBP15.42■□□□□ 0.06
CNTFR-202ENST00000378980 SAMD5Q5TGI4 173 aa15.42■□□□□ 0.06
CNTFR-202ENST00000378980 KRTAP10-3P60369 221 aa15.42■□□□□ 0.06
CNTFR-202ENST00000378980 A0A0J9YXV3 536 aa15.41■□□□□ 0.06
CNTFR-202ENST00000378980 C12orf74Q32Q52 190 aa15.41■□□□□ 0.06
CNTFR-202ENST00000378980 COTL1Q14019 142 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 CEMP1Q6PRD7 247 aaPredicted RBP15.4■□□□□ 0.06
CNTFR-202ENST00000378980 Q6ZTI0 123 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 NDUFA11Q86Y39 141 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 SPANXA1Q9NS26 97 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 UBE2D4Q9Y2X8 147 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 IGHV3-38A0A0C4DH36 116 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 J3QQQ9 107 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 FABP2P12104 132 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 ZNF479Q96JC4 524 aa15.4■□□□□ 0.06
CNTFR-202ENST00000378980 A0A0J9YY99 117 aa15.39■□□□□ 0.05
CNTFR-202ENST00000378980 A0A1B0GWB2 263 aa15.39■□□□□ 0.05
CNTFR-202ENST00000378980 RPL35AP18077 110 aaKnown RBP15.39■□□□□ 0.05
CNTFR-202ENST00000378980 LEPROTO15243 131 aa15.39■□□□□ 0.05
CNTFR-202ENST00000378980 SPCS1Q9Y6A9 102 aa15.39■□□□□ 0.05
CNTFR-202ENST00000378980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.38■□□□□ 0.05
CNTFR-202ENST00000378980 IGKV2-29A2NJV5 120 aaPredicted RBP15.38■□□□□ 0.05
CNTFR-202ENST00000378980 LGALS3P17931 250 aaKnown RBP15.38■□□□□ 0.05
CNTFR-202ENST00000378980 TRAV4A0A0B4J268 109 aa15.37■□□□□ 0.05
CNTFR-202ENST00000378980 GAGE12BA1L429 117 aa15.37■□□□□ 0.05
CNTFR-202ENST00000378980 MRPS36P82909 103 aaKnown RBP15.37■□□□□ 0.05
CNTFR-202ENST00000378980 DAZ2Q13117 558 aaKnown RBP15.37■□□□□ 0.05
CNTFR-202ENST00000378980 OR5A1Q8NGJ0 315 aa15.37■□□□□ 0.05
CNTFR-202ENST00000378980 OTOGQ6ZRI0 2925 aa15.37■□□□□ 0.05
CNTFR-202ENST00000378980 C16orf74Q96GX8 76 aa15.37■□□□□ 0.05
CNTFR-202ENST00000378980 C1QTNF4Q9BXJ3 329 aa15.37■□□□□ 0.05
CNTFR-202ENST00000378980 IGLL5B9A064 214 aa15.36■□□□□ 0.05
CNTFR-202ENST00000378980 SRSF9Q13242 221 aaKnown RBP eCLIP15.36■□□□□ 0.05
CNTFR-202ENST00000378980 CSNK1G2-AS1Q8NCQ2 148 aa15.36■□□□□ 0.05
CNTFR-202ENST00000378980 NOP10Q9NPE3 64 aaKnown RBP15.36■□□□□ 0.05
CNTFR-202ENST00000378980 NOTCH3Q9UM47 2321 aa15.36■□□□□ 0.05
CNTFR-202ENST00000378980 PLAC8L1A1L4L8 177 aa15.36■□□□□ 0.05
CNTFR-202ENST00000378980 RNASE13Q5GAN3 156 aaKnown RBP15.36■□□□□ 0.05
CNTFR-202ENST00000378980 K7EQD1 137 aa15.35■□□□□ 0.05
CNTFR-202ENST00000378980 SPANXB1Q9NS25 103 aaPredicted RBP15.35■□□□□ 0.05
CNTFR-202ENST00000378980 TRBV10-1A0A0K0K1A3 114 aa15.34■□□□□ 0.05
CNTFR-202ENST00000378980 PF4P02776 101 aa15.34■□□□□ 0.05
CNTFR-202ENST00000378980 FOSL1P15407 271 aa15.34■□□□□ 0.05
CNTFR-202ENST00000378980 LINC00482Q8N8I6 264 aa15.34■□□□□ 0.05
CNTFR-202ENST00000378980 TMEM238LA0A1B0GVL6 79 aa15.34■□□□□ 0.05
CNTFR-202ENST00000378980 A6NJY4 79 aa15.34■□□□□ 0.05
CNTFR-202ENST00000378980 Q6ZUT4 128 aa15.34■□□□□ 0.05
CNTFR-202ENST00000378980 SLC25A29Q8N8R3 303 aa15.34■□□□□ 0.05
CNTFR-202ENST00000378980 IGHV3-64A0A075B6Q5 118 aa15.32■□□□□ 0.04
CNTFR-202ENST00000378980 RPL36AP83881 106 aaKnown RBP15.32■□□□□ 0.04
CNTFR-202ENST00000378980 RPL36ALQ969Q0 106 aaKnown RBP15.32■□□□□ 0.04
CNTFR-202ENST00000378980 NOTCH2Q04721 2471 aa15.32■□□□□ 0.04
CNTFR-202ENST00000378980 TINCRA0A1B0GVN0 87 aa15.31■□□□□ 0.04
CNTFR-202ENST00000378980 INAFM1C9JVW0 142 aa15.31■□□□□ 0.04
CNTFR-202ENST00000378980 UBE2D1P51668 147 aa15.31■□□□□ 0.04
CNTFR-202ENST00000378980 RRN3P1Q2M238 152 aa15.31■□□□□ 0.04
CNTFR-202ENST00000378980 TIMM21Q9BVV7 248 aa15.31■□□□□ 0.04
CNTFR-202ENST00000378980 IGHV3-30P01768 117 aa15.29■□□□□ 0.04
CNTFR-202ENST00000378980 IGHV3-30-5P0DP03 117 aa15.29■□□□□ 0.04
CNTFR-202ENST00000378980 DAZ4Q86SG3 579 aaKnown RBP15.29■□□□□ 0.04
CNTFR-202ENST00000378980 OVOL2Q9BRP0 275 aa15.29■□□□□ 0.04
CNTFR-202ENST00000378980 DAZ3Q9NR90 486 aaKnown RBP15.29■□□□□ 0.04
CNTFR-202ENST00000378980 NSD1Q96L73 2696 aaPredicted RBP15.29■□□□□ 0.04
CNTFR-202ENST00000378980 GAGE7O76087 117 aa15.28■□□□□ 0.04
CNTFR-202ENST00000378980 GAGE12FP0CL80 117 aa15.28■□□□□ 0.04
CNTFR-202ENST00000378980 GAGE12GP0CL81 117 aa15.28■□□□□ 0.04
CNTFR-202ENST00000378980 GAGE12IP0CL82 117 aa15.28■□□□□ 0.04
CNTFR-202ENST00000378980 IGHV3-30-3P0DP02 117 aa15.28■□□□□ 0.04
CNTFR-202ENST00000378980 UBE2D3P61077 147 aa15.28■□□□□ 0.04
CNTFR-202ENST00000378980 UBE2D2P62837 147 aa15.28■□□□□ 0.04
CNTFR-202ENST00000378980 C2CD3Q4AC94 2353 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms