RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 KRTAP4-5Q9BYR2 181 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 TRBV6-4A0A1B0GX49 114 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 C5orf52A6NGY3 159 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 ESDP10768 282 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 FHL2Q14192 279 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 DNAJC30Q96LL9 226 aa9.48□□□□□ -0.89
PRPF18-202ENST00000378572 K7EQD1 137 aa9.47□□□□□ -0.89
PRPF18-202ENST00000378572 CDK2AP2O75956 126 aa9.47□□□□□ -0.89
PRPF18-202ENST00000378572 LINC00310P59036 64 aa9.47□□□□□ -0.89
PRPF18-202ENST00000378572 S100A12P80511 92 aa9.47□□□□□ -0.89
PRPF18-202ENST00000378572 Q6ZSN1 163 aa9.47□□□□□ -0.89
PRPF18-202ENST00000378572 CHCHD1Q96BP2 118 aaKnown RBP9.47□□□□□ -0.89
PRPF18-202ENST00000378572 NXT2Q9NPJ8 142 aaKnown RBP9.47□□□□□ -0.89
PRPF18-202ENST00000378572 TRGV4A0A0C4DH28 118 aa9.46□□□□□ -0.89
PRPF18-202ENST00000378572 PMCHP20382 165 aa9.46□□□□□ -0.89
PRPF18-202ENST00000378572 POLR2KP53803 58 aaKnown RBP9.46□□□□□ -0.89
PRPF18-202ENST00000378572 ESRGQ1W209 222 aa9.46□□□□□ -0.89
PRPF18-202ENST00000378572 NIT1Q86X76 327 aa9.46□□□□□ -0.89
PRPF18-202ENST00000378572 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.89
PRPF18-202ENST00000378572 URB1-AS1Q96HZ7 61 aa9.46□□□□□ -0.89
PRPF18-202ENST00000378572 SMIM2Q9BVW6 85 aa9.46□□□□□ -0.89
PRPF18-202ENST00000378572 ST20Q9HBF5 79 aa9.46□□□□□ -0.89
PRPF18-202ENST00000378572 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 SERF1AO75920 110 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 LINC00614P0C842 121 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
PRPF18-202ENST00000378572 SNRPEP62304 92 aaKnown RBP9.45□□□□□ -0.9
PRPF18-202ENST00000378572 Q8N8P6 123 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 SLC25A29Q8N8R3 303 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 TMEM70Q9BUB7 260 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 KRTAP1-5Q9BYS1 174 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 MRPS16Q9Y3D3 137 aaKnown RBP9.45□□□□□ -0.9
PRPF18-202ENST00000378572 HSPG2P98160 4391 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 SDHAF1A6NFY7 115 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 K7EMI3 77 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 RHOHQ15669 191 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 FA2HQ7L5A8 372 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 NEXN-AS1Q8NBZ9 246 aa9.45□□□□□ -0.9
PRPF18-202ENST00000378572 TRBV27A0A0K0K1C4 114 aa9.44□□□□□ -0.9
PRPF18-202ENST00000378572 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
PRPF18-202ENST00000378572 AP5S1Q9NUS5 200 aa9.44□□□□□ -0.9
PRPF18-202ENST00000378572 PRO0255Q9UI72 69 aa9.44□□□□□ -0.9
PRPF18-202ENST00000378572 H3BNG1 76 aa9.43□□□□□ -0.9
PRPF18-202ENST00000378572 VCYO14598 125 aa9.43□□□□□ -0.9
PRPF18-202ENST00000378572 RNASEKQ6P5S7 137 aaKnown RBP9.43□□□□□ -0.9
PRPF18-202ENST00000378572 HIST3H2BBQ8N257 126 aa9.43□□□□□ -0.9
PRPF18-202ENST00000378572 PRADC1Q9BSG0 188 aa9.43□□□□□ -0.9
PRPF18-202ENST00000378572 HHLA3Q9XRX5 114 aa9.43□□□□□ -0.9
PRPF18-202ENST00000378572 TNFRSF18Q9Y5U5 241 aa9.43□□□□□ -0.9
PRPF18-202ENST00000378572 LRP1BQ9NZR2 4599 aa9.43□□□□□ -0.9
PRPF18-202ENST00000378572 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
PRPF18-202ENST00000378572 NUPR1O60356 82 aa9.42□□□□□ -0.9
PRPF18-202ENST00000378572 HSBP1O75506 76 aa9.42□□□□□ -0.9
PRPF18-202ENST00000378572 CRYBA4P53673 196 aa9.42□□□□□ -0.9
PRPF18-202ENST00000378572 RPL36AP83881 106 aaKnown RBP9.42□□□□□ -0.9
PRPF18-202ENST00000378572 RPL36ALQ969Q0 106 aaKnown RBP9.42□□□□□ -0.9
PRPF18-202ENST00000378572 TCAPO15273 167 aa9.42□□□□□ -0.9
PRPF18-202ENST00000378572 PACRGQ96M98 296 aaPredicted RBP9.42□□□□□ -0.9
PRPF18-202ENST00000378572 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
PRPF18-202ENST00000378572 A0A096LPF7 62 aa9.41□□□□□ -0.9
PRPF18-202ENST00000378572 PAX4O43316 350 aa9.41□□□□□ -0.9
PRPF18-202ENST00000378572 Q9UF83 564 aa9.41□□□□□ -0.9
PRPF18-202ENST00000378572 PCP4L1A6NKN8 68 aa9.4□□□□□ -0.9
PRPF18-202ENST00000378572 I3L3M4 83 aa9.4□□□□□ -0.9
PRPF18-202ENST00000378572 SIVA1O15304 175 aa9.4□□□□□ -0.9
PRPF18-202ENST00000378572 LINC00694P0DN24 101 aa9.4□□□□□ -0.9
PRPF18-202ENST00000378572 KRTAP10-2P60368 255 aa9.4□□□□□ -0.9
PRPF18-202ENST00000378572 VSIG2Q96IQ7 327 aa9.4□□□□□ -0.9
PRPF18-202ENST00000378572 KIR2DL4Q99706 377 aa9.4□□□□□ -0.9
PRPF18-202ENST00000378572 EREGO14944 169 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 S100A2P29034 98 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 UBE2D3P61077 147 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 UBE2D2P62837 147 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 LAGE3Q14657 143 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 ORMDL2Q53FV1 153 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 TMEM18Q96B42 140 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 AMTP48728 403 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 DAZ4Q86SG3 579 aaKnown RBP9.39□□□□□ -0.91
PRPF18-202ENST00000378572 Q8N1X5 172 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 C12orf57Q99622 126 aa9.39□□□□□ -0.91
PRPF18-202ENST00000378572 DAZ3Q9NR90 486 aaKnown RBP9.39□□□□□ -0.91
PRPF18-202ENST00000378572 IGHV1-24A0A0C4DH33 117 aa9.38□□□□□ -0.91
PRPF18-202ENST00000378572 BTF3P20290 206 aaKnown RBP9.38□□□□□ -0.91
PRPF18-202ENST00000378572 PDZD11Q5EBL8 140 aa9.38□□□□□ -0.91
PRPF18-202ENST00000378572 GAGE12JA6NER3 117 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 HBDP02042 147 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 G0S2P27469 103 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 FCER1GP30273 86 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 GAGE1Q13065 139 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 GAGE4Q13068 117 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 GAGE5Q13069 117 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 HIST1H2BLQ99880 126 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
PRPF18-202ENST00000378572 APOBP04114 4563 aaKnown RBP9.37□□□□□ -0.91
PRPF18-202ENST00000378572 A0A096LNJ9 63 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms