RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 PRM2P04554 102 aa9.9□□□□□ -0.82
NPHP4-203ENST00000378169 PCSK5Q92824 1860 aa9.9□□□□□ -0.83
NPHP4-203ENST00000378169 C20orf203Q8NBC4 194 aa9.9□□□□□ -0.83
NPHP4-203ENST00000378169 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 DEFB114Q30KQ6 69 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 C16orf74Q96GX8 76 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 USP24Q9UPU5 2620 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 A4D1N5 150 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 EDN2P20800 178 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 C9orf66Q5T8R8 295 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 SPATA12Q7Z6I5 190 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 Q6ZTI0 123 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 LRRC75A-AS1Q8N1F1 130 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 LAMTOR3Q9UHA4 124 aa9.89□□□□□ -0.83
NPHP4-203ENST00000378169 TRAV25A0A0B4J276 109 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 LINC00310P59036 64 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 ATP6V0E2Q8NHE4 81 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 RNF185Q96GF1 192 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 F8W735 103 aaPredicted RBP9.88□□□□□ -0.83
NPHP4-203ENST00000378169 TAX1BP3O14907 124 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 GAGE2BQ13066 116 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 GAGE2EQ4V326 116 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 GAGE2DQ9UEU5 116 aa9.88□□□□□ -0.83
NPHP4-203ENST00000378169 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
NPHP4-203ENST00000378169 CFC1BP0CG36 223 aa9.87□□□□□ -0.83
NPHP4-203ENST00000378169 CFC1P0CG37 223 aa9.87□□□□□ -0.83
NPHP4-203ENST00000378169 UBE2WQ96B02 151 aa9.87□□□□□ -0.83
NPHP4-203ENST00000378169 E9PLD3 99 aa9.87□□□□□ -0.83
NPHP4-203ENST00000378169 SH2D6Q7Z4S9 175 aa9.87□□□□□ -0.83
NPHP4-203ENST00000378169 IGLL5B9A064 214 aa9.87□□□□□ -0.83
NPHP4-203ENST00000378169 DNAJC30Q96LL9 226 aa9.87□□□□□ -0.83
NPHP4-203ENST00000378169 LGALS9O00182 355 aa9.86□□□□□ -0.83
NPHP4-203ENST00000378169 PSCAO43653 123 aa9.86□□□□□ -0.83
NPHP4-203ENST00000378169 MUSTN1Q8IVN3 82 aa9.86□□□□□ -0.83
NPHP4-203ENST00000378169 ZNF702PQ9H963 129 aa9.86□□□□□ -0.83
NPHP4-203ENST00000378169 F8W1H4 67 aa9.86□□□□□ -0.83
NPHP4-203ENST00000378169 MRPS12O15235 138 aaKnown RBP9.86□□□□□ -0.83
NPHP4-203ENST00000378169 PROK1P58294 105 aa9.86□□□□□ -0.83
NPHP4-203ENST00000378169 INAFM1C9JVW0 142 aa9.86□□□□□ -0.83
NPHP4-203ENST00000378169 DAZ2Q13117 558 aaKnown RBP9.85□□□□□ -0.83
NPHP4-203ENST00000378169 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
NPHP4-203ENST00000378169 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
NPHP4-203ENST00000378169 HHLA3Q9XRX5 114 aa9.85□□□□□ -0.83
NPHP4-203ENST00000378169 AKAP13Q12802 2813 aa9.85□□□□□ -0.83
NPHP4-203ENST00000378169 IGKV2D-26A0A0A0MRZ7 120 aa9.85□□□□□ -0.83
NPHP4-203ENST00000378169 RNASE3P12724 160 aaKnown RBP9.85□□□□□ -0.83
NPHP4-203ENST00000378169 MRGPRG-AS1Q2M3A8 158 aa9.85□□□□□ -0.83
NPHP4-203ENST00000378169 IGLV1-40P01703 118 aa9.84□□□□□ -0.83
NPHP4-203ENST00000378169 TMEM263Q8WUH6 116 aaKnown RBP9.84□□□□□ -0.83
NPHP4-203ENST00000378169 AGRNO00468 2067 aa9.84□□□□□ -0.83
NPHP4-203ENST00000378169 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
NPHP4-203ENST00000378169 SLC25A29Q8N8R3 303 aa9.84□□□□□ -0.83
NPHP4-203ENST00000378169 ANAPC13Q9BS18 74 aa9.84□□□□□ -0.83
NPHP4-203ENST00000378169 Q6ZUT4 128 aa9.84□□□□□ -0.83
NPHP4-203ENST00000378169 F8P00451 2351 aa9.84□□□□□ -0.83
NPHP4-203ENST00000378169 ATP5G1P05496 136 aa9.83□□□□□ -0.84
NPHP4-203ENST00000378169 Q9HAA7 133 aa9.83□□□□□ -0.84
NPHP4-203ENST00000378169 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
NPHP4-203ENST00000378169 PSMG3-AS1Q96PY0 264 aa9.83□□□□□ -0.84
NPHP4-203ENST00000378169 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
NPHP4-203ENST00000378169 TEX48A0A1B0GUV7 120 aa9.83□□□□□ -0.84
NPHP4-203ENST00000378169 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
NPHP4-203ENST00000378169 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
NPHP4-203ENST00000378169 DCANP1Q8TF63 244 aa9.82□□□□□ -0.84
NPHP4-203ENST00000378169 PPDPFLQ8WWR9 84 aa9.82□□□□□ -0.84
NPHP4-203ENST00000378169 LINC01006Q8NI28 216 aa9.82□□□□□ -0.84
NPHP4-203ENST00000378169 CARD19Q96LW7 228 aa9.82□□□□□ -0.84
NPHP4-203ENST00000378169 GHRHP01286 108 aa9.81□□□□□ -0.84
NPHP4-203ENST00000378169 IGHV3-30-3P0DP02 117 aa9.81□□□□□ -0.84
NPHP4-203ENST00000378169 WFDC2Q14508 124 aa9.81□□□□□ -0.84
NPHP4-203ENST00000378169 ZFAND6Q6FIF0 208 aa9.81□□□□□ -0.84
NPHP4-203ENST00000378169 VSIG2Q96IQ7 327 aa9.81□□□□□ -0.84
NPHP4-203ENST00000378169 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
NPHP4-203ENST00000378169 M0QY20 66 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
NPHP4-203ENST00000378169 BBC3Q96PG8 261 aaPredicted RBP9.8□□□□□ -0.84
NPHP4-203ENST00000378169 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 IGHV3-30P01768 117 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 IGHV3-33P01772 117 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 IGHV3-30-5P0DP03 117 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 RNASE8Q8TDE3 154 aaKnown RBP9.8□□□□□ -0.84
NPHP4-203ENST00000378169 TNRC6BQ9UPQ9 1833 aaKnown RBP9.8□□□□□ -0.84
NPHP4-203ENST00000378169 MRPL23Q16540 153 aaKnown RBP9.8□□□□□ -0.84
NPHP4-203ENST00000378169 NRACQ8N912 160 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
NPHP4-203ENST00000378169 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
NPHP4-203ENST00000378169 SMR3AQ99954 134 aa9.79□□□□□ -0.84
NPHP4-203ENST00000378169 U3KQK5 164 aa9.79□□□□□ -0.84
NPHP4-203ENST00000378169 KLLNB2CW77 178 aa9.79□□□□□ -0.84
NPHP4-203ENST00000378169 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
NPHP4-203ENST00000378169 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
NPHP4-203ENST00000378169 LINC00467Q9BRT7 94 aa9.78□□□□□ -0.84
NPHP4-203ENST00000378169 TRAV13-2A0A0B4J235 113 aa9.78□□□□□ -0.84
NPHP4-203ENST00000378169 TRBV10-1A0A0K0K1A3 114 aa9.77□□□□□ -0.84
NPHP4-203ENST00000378169 SND1-IT1Q9HBX3 110 aa9.77□□□□□ -0.84
NPHP4-203ENST00000378169 CDKN2A-AS1Q9UH64 79 aa9.77□□□□□ -0.84
NPHP4-203ENST00000378169 PRSS47A8MTI9 375 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 461.7 ms