RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 NDUFA7O95182 113 aa14.7□□□□□ -0.06
PCDH8-202ENST00000377942 MYO9AB2RTY4 2548 aa14.7□□□□□ -0.06
PCDH8-202ENST00000377942 AVPP01185 164 aa14.7□□□□□ -0.06
PCDH8-202ENST00000377942 GTSF1LQ9H1H1 148 aa14.69□□□□□ -0.06
PCDH8-202ENST00000377942 H3BQ85 93 aa14.68□□□□□ -0.06
PCDH8-202ENST00000377942 CRYBA4P53673 196 aa14.68□□□□□ -0.06
PCDH8-202ENST00000377942 BAALC-AS2P0C853 105 aa14.68□□□□□ -0.06
PCDH8-202ENST00000377942 NPSP0C0P6 89 aa14.67□□□□□ -0.06
PCDH8-202ENST00000377942 CDPF1Q6NVV7 123 aa14.67□□□□□ -0.06
PCDH8-202ENST00000377942 Q6ZUT4 128 aa14.67□□□□□ -0.06
PCDH8-202ENST00000377942 HAMPP81172 84 aa14.67□□□□□ -0.06
PCDH8-202ENST00000377942 CRIP1P50238 77 aa14.67□□□□□ -0.06
PCDH8-202ENST00000377942 KRTAP10-9P60411 292 aa14.67□□□□□ -0.06
PCDH8-202ENST00000377942 OPRPNQ99935 248 aaPredicted RBP14.67□□□□□ -0.06
PCDH8-202ENST00000377942 TRBV6-4A0A1B0GX49 114 aa14.67□□□□□ -0.06
PCDH8-202ENST00000377942 CRIP2P52943 208 aaPredicted RBP14.67□□□□□ -0.06
PCDH8-202ENST00000377942 C14orf177Q52M58 125 aa14.67□□□□□ -0.06
PCDH8-202ENST00000377942 TINCRA0A1B0GVN0 87 aa14.66□□□□□ -0.06
PCDH8-202ENST00000377942 Q6ZS46 218 aa14.66□□□□□ -0.06
PCDH8-202ENST00000377942 GDF5OSQ5U4N7 250 aa14.66□□□□□ -0.06
PCDH8-202ENST00000377942 CEP295Q9C0D2 2601 aa14.66□□□□□ -0.06
PCDH8-202ENST00000377942 RS1O15537 224 aa14.65□□□□□ -0.06
PCDH8-202ENST00000377942 P0DMU3 169 aa14.65□□□□□ -0.06
PCDH8-202ENST00000377942 FAM231AP0DMU4 169 aa14.65□□□□□ -0.06
PCDH8-202ENST00000377942 FAM231CP0DMU5 169 aa14.65□□□□□ -0.06
PCDH8-202ENST00000377942 DEFB131BA0A096LNP1 70 aa14.65□□□□□ -0.06
PCDH8-202ENST00000377942 A0A1W2PPR1 153 aa14.65□□□□□ -0.06
PCDH8-202ENST00000377942 IGLV2-11P01706 119 aa14.65□□□□□ -0.06
PCDH8-202ENST00000377942 CFAP126Q5VTH2 177 aa14.65□□□□□ -0.06
PCDH8-202ENST00000377942 KIR2DL5BQ8NHK3 375 aa14.64□□□□□ -0.07
PCDH8-202ENST00000377942 CITED1Q99966 193 aa14.64□□□□□ -0.07
PCDH8-202ENST00000377942 HCFC1P51610 2035 aa14.64□□□□□ -0.07
PCDH8-202ENST00000377942 TDRG1Q3Y452 100 aa14.64□□□□□ -0.07
PCDH8-202ENST00000377942 LINC00482Q8N8I6 264 aa14.64□□□□□ -0.07
PCDH8-202ENST00000377942 NTN5Q8WTR8 489 aaPredicted RBP14.64□□□□□ -0.07
PCDH8-202ENST00000377942 GAGE12HA6NDE8 117 aa14.64□□□□□ -0.07
PCDH8-202ENST00000377942 NEXN-AS1Q8NBZ9 246 aa14.63□□□□□ -0.07
PCDH8-202ENST00000377942 KLLNB2CW77 178 aa14.63□□□□□ -0.07
PCDH8-202ENST00000377942 ZNF580Q9UK33 172 aa14.63□□□□□ -0.07
PCDH8-202ENST00000377942 ANKRD11Q6UB99 2663 aaPredicted RBP14.63□□□□□ -0.07
PCDH8-202ENST00000377942 M0QY20 66 aa14.62□□□□□ -0.07
PCDH8-202ENST00000377942 REG3AQ06141 175 aa14.62□□□□□ -0.07
PCDH8-202ENST00000377942 BRI3O95415 125 aa14.62□□□□□ -0.07
PCDH8-202ENST00000377942 CEMP1Q6PRD7 247 aaPredicted RBP14.61□□□□□ -0.07
PCDH8-202ENST00000377942 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.61□□□□□ -0.07
PCDH8-202ENST00000377942 MIR7-3HGQ8N6C7 128 aa14.61□□□□□ -0.07
PCDH8-202ENST00000377942 TTTY13Q9BZ97 58 aa14.61□□□□□ -0.07
PCDH8-202ENST00000377942 DCANP1Q8TF63 244 aa14.6□□□□□ -0.07
PCDH8-202ENST00000377942 TRBV6-5A0A0K0K1A5 114 aa14.6□□□□□ -0.07
PCDH8-202ENST00000377942 ARHGAP32A7KAX9 2087 aa14.6□□□□□ -0.07
PCDH8-202ENST00000377942 ATG2AQ2TAZ0 1938 aa14.6□□□□□ -0.07
PCDH8-202ENST00000377942 LINC00269Q8N2A0 174 aa14.6□□□□□ -0.07
PCDH8-202ENST00000377942 DEFB105AQ8NG35 78 aa14.6□□□□□ -0.07
PCDH8-202ENST00000377942 FXYD2P54710 66 aa14.59□□□□□ -0.07
PCDH8-202ENST00000377942 C18orf65Q6ZTR6 163 aa14.59□□□□□ -0.07
PCDH8-202ENST00000377942 FUSP35637 526 aaKnown RBP eCLIP14.59□□□□□ -0.07
PCDH8-202ENST00000377942 DAND5Q8N907 189 aa14.59□□□□□ -0.07
PCDH8-202ENST00000377942 LINC00467Q9BRT7 94 aa14.59□□□□□ -0.07
PCDH8-202ENST00000377942 U3KQK5 164 aa14.59□□□□□ -0.07
PCDH8-202ENST00000377942 UFSP1Q6NVU6 142 aa14.59□□□□□ -0.07
PCDH8-202ENST00000377942 TRBV6-8A0A0A6YYG3 113 aa14.57□□□□□ -0.08
PCDH8-202ENST00000377942 ANKRD29Q8N6D5 301 aa14.57□□□□□ -0.08
PCDH8-202ENST00000377942 ACYP1P07311 99 aa14.57□□□□□ -0.08
PCDH8-202ENST00000377942 TRAV10A0A0B4J240 114 aa14.56□□□□□ -0.08
PCDH8-202ENST00000377942 RNF185Q96GF1 192 aa14.56□□□□□ -0.08
PCDH8-202ENST00000377942 TRBV27A0A0K0K1C4 114 aa14.56□□□□□ -0.08
PCDH8-202ENST00000377942 PIK3CD-AS1Q5SR53 167 aa14.56□□□□□ -0.08
PCDH8-202ENST00000377942 DIRC1Q969H9 104 aa14.56□□□□□ -0.08
PCDH8-202ENST00000377942 WDR87Q6ZQQ6 2873 aa14.56□□□□□ -0.08
PCDH8-202ENST00000377942 IGHV4-4A0A075B6R2 117 aa14.56□□□□□ -0.08
PCDH8-202ENST00000377942 RNASE3P12724 160 aaKnown RBP14.56□□□□□ -0.08
PCDH8-202ENST00000377942 CHCHD10Q8WYQ3 142 aaPredicted RBP14.55□□□□□ -0.08
PCDH8-202ENST00000377942 IGLV4-3A0A075B6K6 122 aa14.55□□□□□ -0.08
PCDH8-202ENST00000377942 IGHV4-28A0A0C4DH34 117 aa14.55□□□□□ -0.08
PCDH8-202ENST00000377942 UBE2AP49459 152 aa14.55□□□□□ -0.08
PCDH8-202ENST00000377942 LINC01620Q4KN68 170 aa14.54□□□□□ -0.08
PCDH8-202ENST00000377942 CRYGDP07320 174 aa14.54□□□□□ -0.08
PCDH8-202ENST00000377942 NCR3O14931 201 aa14.54□□□□□ -0.08
PCDH8-202ENST00000377942 MIAQ16674 131 aa14.54□□□□□ -0.08
PCDH8-202ENST00000377942 C9orf85Q96MD7 179 aa14.54□□□□□ -0.08
PCDH8-202ENST00000377942 PYGO1Q9Y3Y4 419 aa14.54□□□□□ -0.08
PCDH8-202ENST00000377942 C15orf53Q8NAA6 179 aa14.53□□□□□ -0.08
PCDH8-202ENST00000377942 FAM110AQ9BQ89 295 aa14.53□□□□□ -0.08
PCDH8-202ENST00000377942 CPAMD8Q8IZJ3 1885 aa14.53□□□□□ -0.08
PCDH8-202ENST00000377942 NFE4Q86UQ8 179 aa14.53□□□□□ -0.08
PCDH8-202ENST00000377942 C2CD3Q4AC94 2353 aa14.52□□□□□ -0.09
PCDH8-202ENST00000377942 PRR9Q5T870 116 aa14.52□□□□□ -0.09
PCDH8-202ENST00000377942 RNF183Q96D59 192 aa14.52□□□□□ -0.09
PCDH8-202ENST00000377942 C16orf95Q9H693 158 aa14.52□□□□□ -0.09
PCDH8-202ENST00000377942 CDKN2A-AS1Q9UH64 79 aa14.51□□□□□ -0.09
PCDH8-202ENST00000377942 A0A0J9YXY3 114 aa14.51□□□□□ -0.09
PCDH8-202ENST00000377942 C11orf21Q9P2W6 132 aa14.51□□□□□ -0.09
PCDH8-202ENST00000377942 hADV29S1A0JD25 119 aa14.5□□□□□ -0.09
PCDH8-202ENST00000377942 MRGPRG-AS1Q2M3A8 158 aa14.5□□□□□ -0.09
PCDH8-202ENST00000377942 SPANXCQ9NY87 97 aa14.5□□□□□ -0.09
PCDH8-202ENST00000377942 TANC2Q9HCD6 1990 aa14.5□□□□□ -0.09
PCDH8-202ENST00000377942 JMJD7-PLA2G4BH0Y9G9 81 aa14.5□□□□□ -0.09
PCDH8-202ENST00000377942 ZNF22P17026 224 aaPredicted RBP14.5□□□□□ -0.09
PCDH8-202ENST00000377942 MRPS12O15235 138 aaKnown RBP14.5□□□□□ -0.09
PCDH8-202ENST00000377942 HIGD2BQ4VC39 106 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms