RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 MYMXA0A1B0GTQ4 84 aa9.01□□□□□ -0.97
VRK3-202ENST00000377011 LINC00315P59091 139 aa9.01□□□□□ -0.97
VRK3-202ENST00000377011 C12orf74Q32Q52 190 aa9.01□□□□□ -0.97
VRK3-202ENST00000377011 MAPKAPK5-AS1Q8N8E1 139 aa9.01□□□□□ -0.97
VRK3-202ENST00000377011 BAALCQ8WXS3 180 aa9.01□□□□□ -0.97
VRK3-202ENST00000377011 RPL39LQ96EH5 51 aaKnown RBP9.01□□□□□ -0.97
VRK3-202ENST00000377011 HIST1H4GQ99525 98 aa9.01□□□□□ -0.97
VRK3-202ENST00000377011 CYSLTR1Q9Y271 337 aa9.01□□□□□ -0.97
VRK3-202ENST00000377011 TENM2Q9NT68 2774 aa9.01□□□□□ -0.97
VRK3-202ENST00000377011 RYR2Q92736 4967 aa9□□□□□ -0.97
VRK3-202ENST00000377011 J3KRW8 73 aa9□□□□□ -0.97
VRK3-202ENST00000377011 GNRH2O43555 120 aa9□□□□□ -0.97
VRK3-202ENST00000377011 NHLRC4P0CG21 123 aaPredicted RBP9□□□□□ -0.97
VRK3-202ENST00000377011 TMEM141Q96I45 108 aa9□□□□□ -0.97
VRK3-202ENST00000377011 ZNF479Q96JC4 524 aa9□□□□□ -0.97
VRK3-202ENST00000377011 TRBV7-3A0A075B6L6 115 aa9□□□□□ -0.97
VRK3-202ENST00000377011 F6UB75 175 aa9□□□□□ -0.97
VRK3-202ENST00000377011 TTTY13Q9BZ97 58 aa9□□□□□ -0.97
VRK3-202ENST00000377011 TRAV25A0A0B4J276 109 aa8.99□□□□□ -0.97
VRK3-202ENST00000377011 TMEM238LA0A1B0GVL6 79 aa8.99□□□□□ -0.97
VRK3-202ENST00000377011 A6NJY4 79 aa8.99□□□□□ -0.97
VRK3-202ENST00000377011 VCYO14598 125 aa8.99□□□□□ -0.97
VRK3-202ENST00000377011 SCGB1A1P11684 91 aa8.99□□□□□ -0.97
VRK3-202ENST00000377011 POLR2KP53803 58 aaKnown RBP8.99□□□□□ -0.97
VRK3-202ENST00000377011 SYT8Q8NBV8 401 aa8.99□□□□□ -0.97
VRK3-202ENST00000377011 C9orf85Q96MD7 179 aa8.99□□□□□ -0.97
VRK3-202ENST00000377011 TIMM17AQ99595 171 aa8.99□□□□□ -0.97
VRK3-202ENST00000377011 SPAG8Q99932 426 aaPredicted RBP8.99□□□□□ -0.97
VRK3-202ENST00000377011 PRSS29PA6NIE9 313 aa8.98□□□□□ -0.97
VRK3-202ENST00000377011 SNRPD3P62318 126 aaKnown RBP8.98□□□□□ -0.97
VRK3-202ENST00000377011 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
VRK3-202ENST00000377011 KIR2DL4Q99706 377 aa8.98□□□□□ -0.97
VRK3-202ENST00000377011 LYSTQ99698 3801 aa8.98□□□□□ -0.97
VRK3-202ENST00000377011 K7ERJ3 54 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 DUSP14O95147 198 aaKnown RBP8.97□□□□□ -0.97
VRK3-202ENST00000377011 DEFB1P60022 68 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 HERVK_113P61574 105 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 RPL24P83731 157 aaKnown RBP8.97□□□□□ -0.97
VRK3-202ENST00000377011 HYDINQ4G0P3 5121 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 A0A0J9YX75 114 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 TRBV27A0A0K0K1C4 114 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 K7EQG2 157 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 SUMO4Q6EEV6 95 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 ZFP2Q6ZN57 461 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 WWC2-AS2Q96NR7 200 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 MAP6D1Q9H9H5 199 aa8.97□□□□□ -0.97
VRK3-202ENST00000377011 IGHV3-16A0A0C4DH30 117 aa8.96□□□□□ -0.98
VRK3-202ENST00000377011 IGIPA6NJ69 53 aa8.96□□□□□ -0.98
VRK3-202ENST00000377011 PMVKQ15126 192 aa8.96□□□□□ -0.98
VRK3-202ENST00000377011 RHOHQ15669 191 aa8.96□□□□□ -0.98
VRK3-202ENST00000377011 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.98
VRK3-202ENST00000377011 EDA2RQ9HAV5 297 aa8.96□□□□□ -0.98
VRK3-202ENST00000377011 TEX48A0A1B0GUV7 120 aa8.95□□□□□ -0.98
VRK3-202ENST00000377011 RPL35AP18077 110 aaKnown RBP8.95□□□□□ -0.98
VRK3-202ENST00000377011 GAGE13Q4V321 117 aa8.95□□□□□ -0.98
VRK3-202ENST00000377011 TMEM238C9JI98 176 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 LYRM7Q5U5X0 104 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 SPANXB1Q9NS25 103 aaPredicted RBP8.94□□□□□ -0.98
VRK3-202ENST00000377011 TP53TG1Q9Y2A0 90 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 TRGV11A0A075B6L2 103 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 IGHV1OR15-1A0A075B7D0 117 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 TRAV12-3A0A0B4J271 114 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 C11orf86A6NJI1 115 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 CRYGDP07320 174 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 TRPT1Q86TN4 253 aaKnown RBP8.94□□□□□ -0.98
VRK3-202ENST00000377011 SIGMAR1Q99720 223 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 SPATA25Q9BR10 227 aa8.94□□□□□ -0.98
VRK3-202ENST00000377011 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
VRK3-202ENST00000377011 SDHAF1A6NFY7 115 aa8.93□□□□□ -0.98
VRK3-202ENST00000377011 ZNF815PA8K554 130 aa8.93□□□□□ -0.98
VRK3-202ENST00000377011 SPRY2O43597 315 aa8.93□□□□□ -0.98
VRK3-202ENST00000377011 DEFB131AP59861 70 aa8.93□□□□□ -0.98
VRK3-202ENST00000377011 OVOL2Q9BRP0 275 aa8.93□□□□□ -0.98
VRK3-202ENST00000377011 DNAH1Q9P2D7 4330 aa8.92□□□□□ -0.98
VRK3-202ENST00000377011 TSHBP01222 138 aa8.92□□□□□ -0.98
VRK3-202ENST00000377011 ZNF688P0C7X2 276 aa8.92□□□□□ -0.98
VRK3-202ENST00000377011 ATP6V0E2Q8NHE4 81 aa8.92□□□□□ -0.98
VRK3-202ENST00000377011 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 KNCNA6PVL3 124 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 F5H697 171 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 M0QY20 66 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 UBE2D1P51668 147 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 WFDC2Q14508 124 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 DEFB135Q30KP9 77 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 ZNF876PQ49A33 203 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 NFE4Q86UQ8 179 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 PRO0461Q9UI25 63 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 A8MTW9 85 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 H3BMG7 143 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 PIK3CD-AS1Q5SR53 167 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 SCGB1D4Q6XE38 83 aa8.91□□□□□ -0.98
VRK3-202ENST00000377011 A0A087WWL8 130 aa8.9□□□□□ -0.98
VRK3-202ENST00000377011 GAGE12HA6NDE8 117 aa8.9□□□□□ -0.98
VRK3-202ENST00000377011 GIG44P09565 113 aaPredicted RBP8.9□□□□□ -0.98
VRK3-202ENST00000377011 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.98
VRK3-202ENST00000377011 ZFAND6Q6FIF0 208 aa8.9□□□□□ -0.98
VRK3-202ENST00000377011 MORN3Q6PF18 240 aaPredicted RBP8.9□□□□□ -0.98
VRK3-202ENST00000377011 ZNF56Q15929 161 aa8.89□□□□□ -0.99
VRK3-202ENST00000377011 AMTNQ6UX39 209 aa8.89□□□□□ -0.99
VRK3-202ENST00000377011 PTH2Q96A98 100 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms