RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ZFAND2AQ8N6M9 145 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 C4orf3Q8WVX3 66 aa4.91□□□□□ -1.62
SMC1A-202ENST00000375340 ANGP03950 147 aaKnown RBP4.9□□□□□ -1.62
SMC1A-202ENST00000375340 TRBV10-2A0A0K0K1G8 114 aa4.9□□□□□ -1.62
SMC1A-202ENST00000375340 LMO4P61968 165 aa4.9□□□□□ -1.62
SMC1A-202ENST00000375340 TMEM126AQ9H061 195 aa4.9□□□□□ -1.62
SMC1A-202ENST00000375340 IGHV1-58A0A0C4DH39 117 aa4.9□□□□□ -1.62
SMC1A-202ENST00000375340 TNFRSF13BO14836 293 aaPredicted RBP4.9□□□□□ -1.62
SMC1A-202ENST00000375340 DNAJC30Q96LL9 226 aa4.9□□□□□ -1.62
SMC1A-202ENST00000375340 LRRK2Q5S007 2527 aa4.9□□□□□ -1.62
SMC1A-202ENST00000375340 MRGPRG-AS1Q2M3A8 158 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 C18orf65Q6ZTR6 163 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 IGHV3-30P01768 117 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 IGHV3-30-5P0DP03 117 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 GYPEP15421 78 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 MIAQ16674 131 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 NAV2Q8IVL1 2488 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 C20orf203Q8NBC4 194 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 TRAV4A0A0B4J268 109 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 GPHB5Q86YW7 130 aa4.9□□□□□ -1.63
SMC1A-202ENST00000375340 Q8N6K4 173 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 MAP6D1Q9H9H5 199 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 TRBV7-3A0A075B6L6 115 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 C16orf74Q96GX8 76 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 SND1-IT1Q9HBX3 110 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 RNASE3P12724 160 aaKnown RBP4.89□□□□□ -1.63
SMC1A-202ENST00000375340 TRIAP1O43715 76 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 VSIG2Q96IQ7 327 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 ZNF22P17026 224 aaPredicted RBP4.89□□□□□ -1.63
SMC1A-202ENST00000375340 TRAV25A0A0B4J276 109 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 K7EMT4 169 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 TMEM61Q8N0U2 210 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 WFDC11Q8NEX6 87 aa4.89□□□□□ -1.63
SMC1A-202ENST00000375340 IGLV4-3A0A075B6K6 122 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 A0A096LNJ9 63 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 M0QY20 66 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 DAZ2Q13117 558 aaKnown RBP4.88□□□□□ -1.63
SMC1A-202ENST00000375340 DAZ4Q86SG3 579 aaKnown RBP4.88□□□□□ -1.63
SMC1A-202ENST00000375340 DAZ3Q9NR90 486 aaKnown RBP4.88□□□□□ -1.63
SMC1A-202ENST00000375340 TSHBP01222 138 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 ABCA2Q9BZC7 2435 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 HAMPP81172 84 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 C14orf132Q9NPU4 83 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 AGRNO00468 2067 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 ZNF561-AS1K7EIQ3 104 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 HERV-K104P63124 156 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 UFSP1Q6NVU6 142 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 DEFB105AQ8NG35 78 aa4.88□□□□□ -1.63
SMC1A-202ENST00000375340 F8W735 103 aaPredicted RBP4.87□□□□□ -1.63
SMC1A-202ENST00000375340 A0A0B4J2C4 111 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 CFAP126Q5VTH2 177 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 FBXL19-AS1Q494R0 122 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 MKI67P46013 3256 aaKnown RBP4.87□□□□□ -1.63
SMC1A-202ENST00000375340 IGHV3-33P01772 117 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 NDUFV3P56181 108 aaKnown RBP4.87□□□□□ -1.63
SMC1A-202ENST00000375340 EBI3Q14213 229 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 HHLA3Q9XRX5 114 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 ANKRD17O75179 2603 aaKnown RBP4.87□□□□□ -1.63
SMC1A-202ENST00000375340 DEFB113Q30KQ7 82 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 HTTP42858 3142 aa4.87□□□□□ -1.63
SMC1A-202ENST00000375340 MRPL23Q16540 153 aaKnown RBP4.86□□□□□ -1.63
SMC1A-202ENST00000375340 Q6ZTI0 123 aa4.86□□□□□ -1.63
SMC1A-202ENST00000375340 TSPEAR-AS2P59090 65 aa4.86□□□□□ -1.63
SMC1A-202ENST00000375340 MIR7-3HGQ8N6C7 128 aa4.86□□□□□ -1.63
SMC1A-202ENST00000375340 TMEM263Q8WUH6 116 aaKnown RBP4.86□□□□□ -1.63
SMC1A-202ENST00000375340 IGLV4-69A0A075B6H9 119 aa4.86□□□□□ -1.63
SMC1A-202ENST00000375340 SLPIP03973 132 aa4.86□□□□□ -1.63
SMC1A-202ENST00000375340 LECT2O14960 151 aa4.86□□□□□ -1.63
SMC1A-202ENST00000375340 RNF152Q8N8N0 203 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 DNAH14Q0VDD8 3507 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 ATP5G1P05496 136 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 Q6ZSV7 163 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 UBL5Q9BZL1 73 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 CDKN2A-AS1Q9UH64 79 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 HIST2H2BCQ6DN03 193 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 CITED2Q99967 270 aaPredicted RBP4.85□□□□□ -1.63
SMC1A-202ENST00000375340 ABCA12Q86UK0 2595 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 NKAPP1Q8N9T2 125 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 ZFYVE26Q68DK2 2539 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 DNAJC9-AS1A6NH13 148 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 PIK3CD-AS1Q5SR53 167 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 SDIM1Q6ZPB5 146 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 A0A1B0GX51 115 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 MRAPQ8TCY5 172 aa4.85□□□□□ -1.63
SMC1A-202ENST00000375340 RPL32P62910 135 aaKnown RBP4.84□□□□□ -1.63
SMC1A-202ENST00000375340 UBE2DNLQ8IWF7 75 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 SPATA25Q9BR10 227 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 APOC4P55056 127 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 XGP55808 180 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 ACYP1P07311 99 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 RBMY1FQ15415 496 aaKnown RBP4.84□□□□□ -1.63
SMC1A-202ENST00000375340 ZMAT4Q9H898 229 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 CCDC179H3BU77 68 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 K7EQG2 157 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 CRIP2P52943 208 aaPredicted RBP4.84□□□□□ -1.63
SMC1A-202ENST00000375340 RPL18AQ02543 176 aaKnown RBP4.84□□□□□ -1.63
SMC1A-202ENST00000375340 CITED1Q99966 193 aa4.84□□□□□ -1.63
SMC1A-202ENST00000375340 ZNF580Q9UK33 172 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms