RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ZFAND2AQ8N6M9 145 aa7.73□□□□□ -1.17
PTCH1-204ENST00000375290 HHLA3Q9XRX5 114 aa7.73□□□□□ -1.17
PTCH1-204ENST00000375290 UBE2D1P51668 147 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 TRBV6-4A0A1B0GX49 114 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 CCL24O00175 119 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 FAM19A3Q7Z5A8 133 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 PRO0255Q9UI72 69 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 IGLV4-3A0A075B6K6 122 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 GNLYP22749 145 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 NRACQ8N912 160 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 PRR14LQ5THK1 2151 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 BCE1O60756 84 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 M0QY20 66 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 BRI3O95415 125 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 RNF185Q96GF1 192 aa7.72□□□□□ -1.17
PTCH1-204ENST00000375290 USP17L23D6RBM5 183 aa7.71□□□□□ -1.17
PTCH1-204ENST00000375290 RUSC1-AS1Q66K80 236 aa7.71□□□□□ -1.17
PTCH1-204ENST00000375290 C14orf177Q52M58 125 aa7.71□□□□□ -1.17
PTCH1-204ENST00000375290 CPAMD8Q8IZJ3 1885 aa7.71□□□□□ -1.17
PTCH1-204ENST00000375290 LINC00322Q6ZN03 302 aaPredicted RBP7.71□□□□□ -1.18
PTCH1-204ENST00000375290 LRP4O75096 1905 aa7.71□□□□□ -1.18
PTCH1-204ENST00000375290 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.18
PTCH1-204ENST00000375290 UBE2AP49459 152 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 Q6ZPA2 131 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 GYPEP15421 78 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 SEC61GP60059 68 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 C20orf197Q8N268 126 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 SIRPDQ9H106 197 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 XGP55808 180 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 TTTY13Q9BZ97 58 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 EXPH5Q8NEV8 1989 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 SPAG11BQ08648 103 aa7.7□□□□□ -1.18
PTCH1-204ENST00000375290 A0A1B0GW54 56 aa7.69□□□□□ -1.18
PTCH1-204ENST00000375290 ZNF580Q9UK33 172 aa7.69□□□□□ -1.18
PTCH1-204ENST00000375290 E7EUB6 86 aa7.69□□□□□ -1.18
PTCH1-204ENST00000375290 LINC01546A6NGU7 62 aa7.69□□□□□ -1.18
PTCH1-204ENST00000375290 POLR2KP53803 58 aaKnown RBP7.69□□□□□ -1.18
PTCH1-204ENST00000375290 TRAV7A0A075B6U4 112 aa7.69□□□□□ -1.18
PTCH1-204ENST00000375290 KLLNB2CW77 178 aa7.69□□□□□ -1.18
PTCH1-204ENST00000375290 RNASE13Q5GAN3 156 aaKnown RBP7.68□□□□□ -1.18
PTCH1-204ENST00000375290 C5orf38Q86SI9 138 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 F8WDY8 70 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 ZFAND3Q9H8U3 227 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 IGKV2D-26A0A0A0MRZ7 120 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 CSDC2Q9Y534 153 aaKnown RBP7.68□□□□□ -1.18
PTCH1-204ENST00000375290 PCDH15Q96QU1 1955 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 ZNF80P51504 273 aaPredicted RBP7.68□□□□□ -1.18
PTCH1-204ENST00000375290 Q8N976 141 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 FRMD6-AS1P0C7T7 363 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 DHRS4-AS1Q9P1J3 65 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 PRAC2D3DTV9 90 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 LY6LH3BQJ8 138 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 TRBV7-7A0A0K0K1E9 115 aa7.68□□□□□ -1.18
PTCH1-204ENST00000375290 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
PTCH1-204ENST00000375290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.68□□□□□ -1.18
PTCH1-204ENST00000375290 CCDC140Q96MF4 163 aa7.67□□□□□ -1.18
PTCH1-204ENST00000375290 NAV3Q8IVL0 2385 aa7.67□□□□□ -1.18
PTCH1-204ENST00000375290 LOC107984640A0A0U1RRK4 108 aa7.67□□□□□ -1.18
PTCH1-204ENST00000375290 PSMG3-AS1Q96PY0 264 aa7.67□□□□□ -1.18
PTCH1-204ENST00000375290 TNFRSF13BO14836 293 aaPredicted RBP7.66□□□□□ -1.18
PTCH1-204ENST00000375290 TRAV23DV6A0A075B6W5 121 aa7.66□□□□□ -1.18
PTCH1-204ENST00000375290 K7EQG2 157 aa7.66□□□□□ -1.18
PTCH1-204ENST00000375290 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
PTCH1-204ENST00000375290 Q8N7P7 452 aa7.66□□□□□ -1.18
PTCH1-204ENST00000375290 RITA1Q96K30 269 aa7.66□□□□□ -1.18
PTCH1-204ENST00000375290 MRPS12O15235 138 aaKnown RBP7.66□□□□□ -1.18
PTCH1-204ENST00000375290 ADAMTS20P59510 1910 aa7.65□□□□□ -1.18
PTCH1-204ENST00000375290 DEFB104AQ8WTQ1 72 aa7.65□□□□□ -1.18
PTCH1-204ENST00000375290 IGKV2D-24A0A075B6R9 120 aa7.65□□□□□ -1.18
PTCH1-204ENST00000375290 CCL18P55774 89 aa7.65□□□□□ -1.19
PTCH1-204ENST00000375290 LINC00310P59036 64 aa7.65□□□□□ -1.19
PTCH1-204ENST00000375290 ASPHD1Q5U4P2 390 aa7.64□□□□□ -1.19
PTCH1-204ENST00000375290 C9orf85Q96MD7 179 aa7.64□□□□□ -1.19
PTCH1-204ENST00000375290 ARHGAP32A7KAX9 2087 aa7.64□□□□□ -1.19
PTCH1-204ENST00000375290 LY6HO94772 140 aa7.64□□□□□ -1.19
PTCH1-204ENST00000375290 CRIP1P50238 77 aa7.64□□□□□ -1.19
PTCH1-204ENST00000375290 K7ERS5 55 aa7.64□□□□□ -1.19
PTCH1-204ENST00000375290 NDUFS5O43920 106 aa7.64□□□□□ -1.19
PTCH1-204ENST00000375290 ENHOQ6UWT2 76 aa7.64□□□□□ -1.19
PTCH1-204ENST00000375290 CDKN2A-AS1Q9UH64 79 aa7.63□□□□□ -1.19
PTCH1-204ENST00000375290 MAPKAPK5-AS1Q8N8E1 139 aa7.63□□□□□ -1.19
PTCH1-204ENST00000375290 LINC01561Q8N1V8 128 aa7.63□□□□□ -1.19
PTCH1-204ENST00000375290 IGIPA6NJ69 53 aa7.63□□□□□ -1.19
PTCH1-204ENST00000375290 A6NDX4 124 aa7.63□□□□□ -1.19
PTCH1-204ENST00000375290 DEFB112Q30KQ8 113 aa7.63□□□□□ -1.19
PTCH1-204ENST00000375290 CCKP06307 115 aa7.63□□□□□ -1.19
PTCH1-204ENST00000375290 Q8IZM0 81 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 CFHR3Q02985 330 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 RS1O15537 224 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 CRYGAP11844 174 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 MAP6D1Q9H9H5 199 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 UBE2D4Q9Y2X8 147 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 B9D2Q9BPU9 175 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 CD164L2Q6UWJ8 174 aa7.62□□□□□ -1.19
PTCH1-204ENST00000375290 RNF223E7ERA6 249 aa7.61□□□□□ -1.19
PTCH1-204ENST00000375290 Q8N6K4 173 aa7.61□□□□□ -1.19
PTCH1-204ENST00000375290 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
PTCH1-204ENST00000375290 TRBV6-8A0A0A6YYG3 113 aa7.61□□□□□ -1.19
PTCH1-204ENST00000375290 C1orf195Q5TG92 126 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms