RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 UBE2L6O14933 153 aa8.66□□□□□ -1.02
CXCL12-202ENST00000374426 RPS10P46783 165 aaKnown RBP8.66□□□□□ -1.02
CXCL12-202ENST00000374426 AMTP48728 403 aa8.66□□□□□ -1.02
CXCL12-202ENST00000374426 COTL1Q14019 142 aa8.66□□□□□ -1.02
CXCL12-202ENST00000374426 ODF1Q14990 250 aa8.66□□□□□ -1.02
CXCL12-202ENST00000374426 PRSS3P2Q8NHM4 247 aa8.66□□□□□ -1.02
CXCL12-202ENST00000374426 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
CXCL12-202ENST00000374426 BATF3Q9NR55 127 aa8.66□□□□□ -1.02
CXCL12-202ENST00000374426 GNG13Q9P2W3 67 aa8.66□□□□□ -1.02
CXCL12-202ENST00000374426 IGKV3OR2-268A0A0C4DH90 116 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 F2Z2F3 143 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 NDUFS6O75380 124 aaKnown RBP8.65□□□□□ -1.02
CXCL12-202ENST00000374426 TRGC1P0CF51 173 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 NTF3P20783 257 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
CXCL12-202ENST00000374426 MAJINQ3KP22 176 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 CFAP161Q6P656 301 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 LYZL1Q6UWQ5 148 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 DPH3P1Q9H4G8 78 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 MANBALQ9NQG1 85 aa8.65□□□□□ -1.02
CXCL12-202ENST00000374426 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
CXCL12-202ENST00000374426 RAB19A4D1S5 217 aa8.64□□□□□ -1.03
CXCL12-202ENST00000374426 GTSF1Q8WW33 167 aa8.64□□□□□ -1.03
CXCL12-202ENST00000374426 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 HMSDA8MTL9 139 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 BCL2L11O43521 198 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 IFNA1P01562 189 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 GNG4P50150 75 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 C9orf62Q8N4C0 152 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 STPG4Q8N801 248 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 CHCHD10Q8WYQ3 142 aaPredicted RBP8.63□□□□□ -1.03
CXCL12-202ENST00000374426 SMIM12Q96EX1 92 aa8.63□□□□□ -1.03
CXCL12-202ENST00000374426 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
CXCL12-202ENST00000374426 TRAV1-1A0A0B4J248 108 aa8.62□□□□□ -1.03
CXCL12-202ENST00000374426 KANTRA0A1W2PQU2 76 aa8.62□□□□□ -1.03
CXCL12-202ENST00000374426 CTRLP40313 264 aa8.62□□□□□ -1.03
CXCL12-202ENST00000374426 GATD1Q8NB37 220 aa8.62□□□□□ -1.03
CXCL12-202ENST00000374426 LYPD6BQ8NI32 183 aa8.62□□□□□ -1.03
CXCL12-202ENST00000374426 A0A096LNI7 61 aa8.61□□□□□ -1.03
CXCL12-202ENST00000374426 TRAV26-2A0A0B4J265 109 aa8.61□□□□□ -1.03
CXCL12-202ENST00000374426 RGS21Q2M5E4 152 aa8.61□□□□□ -1.03
CXCL12-202ENST00000374426 Q6ZNX1 250 aa8.61□□□□□ -1.03
CXCL12-202ENST00000374426 CNFNQ9BYD5 112 aa8.61□□□□□ -1.03
CXCL12-202ENST00000374426 A0A0J9YXV3 536 aa8.6□□□□□ -1.03
CXCL12-202ENST00000374426 FOXI1Q12951 378 aa8.6□□□□□ -1.03
CXCL12-202ENST00000374426 AMMECR1LQ6DCA0 310 aa8.6□□□□□ -1.03
CXCL12-202ENST00000374426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.59□□□□□ -1.03
CXCL12-202ENST00000374426 IGKV2-29A2NJV5 120 aaPredicted RBP8.59□□□□□ -1.03
CXCL12-202ENST00000374426 KRTAP10-8P60410 259 aa8.59□□□□□ -1.03
CXCL12-202ENST00000374426 EIF5AP63241 154 aaKnown RBP8.59□□□□□ -1.03
CXCL12-202ENST00000374426 MEF2BQ02080 365 aaPredicted RBP8.59□□□□□ -1.03
CXCL12-202ENST00000374426 TWIST1Q15672 202 aa8.59□□□□□ -1.03
CXCL12-202ENST00000374426 RNASEKQ6P5S7 137 aaKnown RBP8.59□□□□□ -1.03
CXCL12-202ENST00000374426 NUDT10Q8NFP7 164 aa8.59□□□□□ -1.03
CXCL12-202ENST00000374426 RPL39LQ96EH5 51 aaKnown RBP8.59□□□□□ -1.03
CXCL12-202ENST00000374426 NUDT11Q96G61 164 aa8.59□□□□□ -1.03
CXCL12-202ENST00000374426 PDE6DO43924 150 aa8.58□□□□□ -1.04
CXCL12-202ENST00000374426 NCR2O95944 276 aa8.58□□□□□ -1.04
CXCL12-202ENST00000374426 FGF6P10767 208 aa8.58□□□□□ -1.04
CXCL12-202ENST00000374426 BIN3Q9NQY0 253 aa8.58□□□□□ -1.04
CXCL12-202ENST00000374426 MED9Q9NWA0 146 aa8.58□□□□□ -1.04
CXCL12-202ENST00000374426 H7C423 109 aa8.57□□□□□ -1.04
CXCL12-202ENST00000374426 APCSP02743 223 aa8.57□□□□□ -1.04
CXCL12-202ENST00000374426 SPINK6Q6UWN8 80 aa8.57□□□□□ -1.04
CXCL12-202ENST00000374426 LINC00526Q96FQ7 95 aa8.57□□□□□ -1.04
CXCL12-202ENST00000374426 LINC00474Q9P2X8 69 aa8.57□□□□□ -1.04
CXCL12-202ENST00000374426 XCL1P47992 114 aa8.56□□□□□ -1.04
CXCL12-202ENST00000374426 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
CXCL12-202ENST00000374426 SRSF9Q13242 221 aaKnown RBP eCLIP8.56□□□□□ -1.04
CXCL12-202ENST00000374426 OR5A1Q8NGJ0 315 aa8.56□□□□□ -1.04
CXCL12-202ENST00000374426 RNASE7Q9H1E1 156 aaKnown RBP8.56□□□□□ -1.04
CXCL12-202ENST00000374426 RPP21Q9H633 154 aaKnown RBP8.56□□□□□ -1.04
CXCL12-202ENST00000374426 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
CXCL12-202ENST00000374426 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
CXCL12-202ENST00000374426 TEX46H3BTG2 121 aa8.55□□□□□ -1.04
CXCL12-202ENST00000374426 BCL2P10415 239 aa8.55□□□□□ -1.04
CXCL12-202ENST00000374426 ZNF25P17030 456 aaPredicted RBP8.55□□□□□ -1.04
CXCL12-202ENST00000374426 REG3GQ6UW15 175 aa8.55□□□□□ -1.04
CXCL12-202ENST00000374426 IGHV1-58A0A0C4DH39 117 aa8.54□□□□□ -1.04
CXCL12-202ENST00000374426 LINC00959A0A1B0GUT2 108 aa8.54□□□□□ -1.04
CXCL12-202ENST00000374426 K7EN84 100 aa8.54□□□□□ -1.04
CXCL12-202ENST00000374426 CCL25O15444 150 aa8.54□□□□□ -1.04
CXCL12-202ENST00000374426 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
CXCL12-202ENST00000374426 TEX261Q6UWH6 196 aa8.53□□□□□ -1.04
CXCL12-202ENST00000374426 Q6ZRP5 223 aa8.53□□□□□ -1.04
CXCL12-202ENST00000374426 PKIGQ9Y2B9 76 aa8.53□□□□□ -1.04
CXCL12-202ENST00000374426 LPAP08519 4548 aa8.53□□□□□ -1.04
CXCL12-202ENST00000374426 I3L3M4 83 aa8.52□□□□□ -1.05
CXCL12-202ENST00000374426 ESDP10768 282 aa8.52□□□□□ -1.05
CXCL12-202ENST00000374426 EIF5AL1Q6IS14 154 aaKnown RBP8.52□□□□□ -1.05
CXCL12-202ENST00000374426 SMIM15Q7Z3B0 74 aa8.52□□□□□ -1.05
CXCL12-202ENST00000374426 OCC1Q8TAD7 63 aa8.52□□□□□ -1.05
CXCL12-202ENST00000374426 BTF3L4Q96K17 158 aa8.52□□□□□ -1.05
CXCL12-202ENST00000374426 TRBV6-5A0A0K0K1A5 114 aa8.51□□□□□ -1.05
CXCL12-202ENST00000374426 GAS8-AS1O95177 125 aa8.51□□□□□ -1.05
CXCL12-202ENST00000374426 TSHBP01222 138 aa8.51□□□□□ -1.05
CXCL12-202ENST00000374426 PMCHP20382 165 aa8.51□□□□□ -1.05
CXCL12-202ENST00000374426 SYCNQ0VAF6 134 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms