RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 ZNRF2Q8NHG8 242 aa12.04□□□□□ -0.48
PTPN20-203ENST00000374342 HHLA3Q9XRX5 114 aa12.03□□□□□ -0.48
PTPN20-203ENST00000374342 SMIM9A6NGZ8 99 aa12.03□□□□□ -0.48
PTPN20-203ENST00000374342 IGHV4-30-4P0DP06 118 aa12.03□□□□□ -0.48
PTPN20-203ENST00000374342 COTL1Q14019 142 aa12.03□□□□□ -0.48
PTPN20-203ENST00000374342 TRRAPQ9Y4A5 3859 aa12.03□□□□□ -0.48
PTPN20-203ENST00000374342 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
PTPN20-203ENST00000374342 RPL36AP83881 106 aaKnown RBP12.02□□□□□ -0.49
PTPN20-203ENST00000374342 PMVKQ15126 192 aa12.02□□□□□ -0.49
PTPN20-203ENST00000374342 BATFQ16520 125 aa12.02□□□□□ -0.49
PTPN20-203ENST00000374342 MRPL52Q86TS9 123 aaKnown RBP12.02□□□□□ -0.49
PTPN20-203ENST00000374342 RPL36ALQ969Q0 106 aaKnown RBP12.02□□□□□ -0.49
PTPN20-203ENST00000374342 TRBV7-3A0A075B6L6 115 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 TRGV4A0A0C4DH28 118 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 DEFB130BP0DP73 79 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 DEFB130AP0DP74 79 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 OPRPNQ99935 248 aaPredicted RBP12.01□□□□□ -0.49
PTPN20-203ENST00000374342 ZMAT5Q9UDW3 170 aaKnown RBP12.01□□□□□ -0.49
PTPN20-203ENST00000374342 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 GAGE1Q13065 139 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 GAGE4Q13068 117 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 GAGE5Q13069 117 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 CST9LQ9H4G1 147 aa12.01□□□□□ -0.49
PTPN20-203ENST00000374342 MRPS16Q9Y3D3 137 aaKnown RBP12.01□□□□□ -0.49
PTPN20-203ENST00000374342 STAB1Q9NY15 2570 aa12□□□□□ -0.49
PTPN20-203ENST00000374342 FGF6P10767 208 aa12□□□□□ -0.49
PTPN20-203ENST00000374342 OR11H2Q8NH07 326 aa12□□□□□ -0.49
PTPN20-203ENST00000374342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-203ENST00000374342 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
PTPN20-203ENST00000374342 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-203ENST00000374342 CIDEAO60543 219 aa11.99□□□□□ -0.49
PTPN20-203ENST00000374342 KRTAP10-11P60412 298 aa11.99□□□□□ -0.49
PTPN20-203ENST00000374342 IGLV4-69A0A075B6H9 119 aa11.99□□□□□ -0.49
PTPN20-203ENST00000374342 PCP2Q8IVA1 136 aa11.99□□□□□ -0.49
PTPN20-203ENST00000374342 IGLV4-3A0A075B6K6 122 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 LOC100131303A0A0U1RQF7 123 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 LINC00612Q8N6U2 182 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 MAST4O15021 2626 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 TRBV6-4A0A1B0GX49 114 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 DEFB4AO15263 64 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 UBE2D3P61077 147 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 UBE2D2P62837 147 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 FHL2Q14192 279 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 CEMP1Q6PRD7 247 aaPredicted RBP11.98□□□□□ -0.49
PTPN20-203ENST00000374342 BOD1L2Q8IYS8 172 aa11.98□□□□□ -0.49
PTPN20-203ENST00000374342 IGHV4-28A0A0C4DH34 117 aa11.97□□□□□ -0.49
PTPN20-203ENST00000374342 C11orf86A6NJI1 115 aa11.97□□□□□ -0.49
PTPN20-203ENST00000374342 LBHQ53QV2 105 aaPredicted RBP11.97□□□□□ -0.49
PTPN20-203ENST00000374342 FAM222AQ5U5X8 452 aa11.97□□□□□ -0.49
PTPN20-203ENST00000374342 C2orf91Q6ZV80 131 aa11.97□□□□□ -0.49
PTPN20-203ENST00000374342 C2orf88Q9BSF0 95 aa11.97□□□□□ -0.49
PTPN20-203ENST00000374342 HINT1P49773 126 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-203ENST00000374342 DAZ4Q86SG3 579 aaKnown RBP11.96□□□□□ -0.49
PTPN20-203ENST00000374342 DAZ3Q9NR90 486 aaKnown RBP11.96□□□□□ -0.49
PTPN20-203ENST00000374342 PYGO1Q9Y3Y4 419 aa11.96□□□□□ -0.49
PTPN20-203ENST00000374342 EGFEM1PQ0D2K5 195 aa11.96□□□□□ -0.5
PTPN20-203ENST00000374342 TTTY13Q9BZ97 58 aa11.96□□□□□ -0.5
PTPN20-203ENST00000374342 SPANXA1Q9NS26 97 aa11.96□□□□□ -0.5
PTPN20-203ENST00000374342 UBE2D4Q9Y2X8 147 aa11.96□□□□□ -0.5
PTPN20-203ENST00000374342 LYRM9A8MSI8 78 aa11.95□□□□□ -0.5
PTPN20-203ENST00000374342 VCX2Q9H322 139 aa11.95□□□□□ -0.5
PTPN20-203ENST00000374342 RNASE13Q5GAN3 156 aaKnown RBP11.94□□□□□ -0.5
PTPN20-203ENST00000374342 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 PRADC1Q9BSG0 188 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 NBEAL2Q6ZNJ1 2754 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 DLEU1O43261 78 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 TMEM97Q5BJF2 176 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 Q8NAQ8 132 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 FAM104AQ969W3 186 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 RNF183Q96D59 192 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 CHAC1Q9BUX1 264 aa11.94□□□□□ -0.5
PTPN20-203ENST00000374342 MIFP14174 115 aa11.93□□□□□ -0.5
PTPN20-203ENST00000374342 Q6ZUT4 128 aa11.93□□□□□ -0.5
PTPN20-203ENST00000374342 TRAV8-6A0A0B4J262 113 aa11.92□□□□□ -0.5
PTPN20-203ENST00000374342 MPV17L2Q567V2 206 aa11.92□□□□□ -0.5
PTPN20-203ENST00000374342 NTM-AS1Q6ZSK4 140 aa11.92□□□□□ -0.5
PTPN20-203ENST00000374342 G3V4G9 280 aa11.92□□□□□ -0.5
PTPN20-203ENST00000374342 AMELXQ99217 191 aa11.92□□□□□ -0.5
PTPN20-203ENST00000374342 NPSP0C0P6 89 aa11.91□□□□□ -0.5
PTPN20-203ENST00000374342 TMEM170BQ5T4T1 132 aa11.91□□□□□ -0.5
PTPN20-203ENST00000374342 A0A1B0GV90 55 aa11.9□□□□□ -0.5
PTPN20-203ENST00000374342 HERVK_113P61574 105 aa11.9□□□□□ -0.5
PTPN20-203ENST00000374342 NFE4Q86UQ8 179 aa11.9□□□□□ -0.5
PTPN20-203ENST00000374342 CELA1Q9UNI1 258 aa11.9□□□□□ -0.5
PTPN20-203ENST00000374342 A0A0J9YXV3 536 aa11.9□□□□□ -0.51
PTPN20-203ENST00000374342 E9PLD3 99 aa11.9□□□□□ -0.51
PTPN20-203ENST00000374342 LINC00694P0DN24 101 aa11.9□□□□□ -0.51
PTPN20-203ENST00000374342 DAD1P61803 113 aa11.9□□□□□ -0.51
PTPN20-203ENST00000374342 PKD1L1Q8TDX9 2849 aa11.89□□□□□ -0.51
PTPN20-203ENST00000374342 CRYBA4P53673 196 aa11.89□□□□□ -0.51
PTPN20-203ENST00000374342 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
PTPN20-203ENST00000374342 GTSF1LQ9H1H1 148 aa11.89□□□□□ -0.51
PTPN20-203ENST00000374342 CMYA5Q8N3K9 4069 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 SIVA1O15304 175 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 GYPEP15421 78 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 SBSPONQ8IVN8 264 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms