RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 NDUFA12Q9UI09 145 aa12.16□□□□□ -0.46
PABPC4-203ENST00000372858 USP9YO00507 2555 aaPredicted RBP12.16□□□□□ -0.46
PABPC4-203ENST00000372858 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
PABPC4-203ENST00000372858 RPL13AP40429 203 aaKnown RBP12.16□□□□□ -0.46
PABPC4-203ENST00000372858 CEMP1Q6PRD7 247 aaPredicted RBP12.16□□□□□ -0.46
PABPC4-203ENST00000372858 TRAV8-4A0A0B4J246 113 aa12.15□□□□□ -0.46
PABPC4-203ENST00000372858 TRAV4A0A0B4J268 109 aa12.15□□□□□ -0.46
PABPC4-203ENST00000372858 ADAMTSL4-AS1Q5T5F5 129 aa12.15□□□□□ -0.46
PABPC4-203ENST00000372858 HTN1P15515 57 aa12.15□□□□□ -0.46
PABPC4-203ENST00000372858 FAM104AQ969W3 186 aa12.15□□□□□ -0.46
PABPC4-203ENST00000372858 MYO18BQ8IUG5 2567 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 CRLF1O75462 422 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 COX6CP09669 75 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 GAGE5Q13069 117 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 GAGE6Q13070 117 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 DEFB112Q30KQ8 113 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 RNASE13Q5GAN3 156 aaKnown RBP12.14□□□□□ -0.47
PABPC4-203ENST00000372858 C2orf82Q6UX34 121 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 ICOSQ9Y6W8 199 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 H3BMM0 161 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 UBE2WQ96B02 151 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 SPANXDQ9BXN6 97 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 PRORYQ9H606 182 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 TNFRSF18Q9Y5U5 241 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 ZANQ9Y493 2812 aa12.14□□□□□ -0.47
PABPC4-203ENST00000372858 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
PABPC4-203ENST00000372858 PROK1P58294 105 aa12.13□□□□□ -0.47
PABPC4-203ENST00000372858 PRRC2AP48634 2157 aaKnown RBP12.13□□□□□ -0.47
PABPC4-203ENST00000372858 NHLRC4P0CG21 123 aaPredicted RBP12.12□□□□□ -0.47
PABPC4-203ENST00000372858 MIAQ16674 131 aa12.12□□□□□ -0.47
PABPC4-203ENST00000372858 TTC32Q5I0X7 151 aa12.12□□□□□ -0.47
PABPC4-203ENST00000372858 VSIG2Q96IQ7 327 aa12.12□□□□□ -0.47
PABPC4-203ENST00000372858 EDA2RQ9HAV5 297 aa12.12□□□□□ -0.47
PABPC4-203ENST00000372858 NDUFV3P56181 108 aaKnown RBP12.12□□□□□ -0.47
PABPC4-203ENST00000372858 NPC2P61916 151 aa12.12□□□□□ -0.47
PABPC4-203ENST00000372858 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
PABPC4-203ENST00000372858 H7C423 109 aa12.11□□□□□ -0.47
PABPC4-203ENST00000372858 PIEZO1Q92508 2521 aa12.11□□□□□ -0.47
PABPC4-203ENST00000372858 FAM208BQ5VWN6 2430 aa12.11□□□□□ -0.47
PABPC4-203ENST00000372858 A8MZ25 164 aa12.11□□□□□ -0.47
PABPC4-203ENST00000372858 RNF152Q8N8N0 203 aa12.1□□□□□ -0.47
PABPC4-203ENST00000372858 C15orf53Q8NAA6 179 aa12.1□□□□□ -0.47
PABPC4-203ENST00000372858 PKD1L2Q7Z442 2459 aa12.1□□□□□ -0.47
PABPC4-203ENST00000372858 KNCNA6PVL3 124 aa12.1□□□□□ -0.47
PABPC4-203ENST00000372858 HOXD3P31249 432 aaPredicted RBP12.1□□□□□ -0.47
PABPC4-203ENST00000372858 Q6ZSV7 163 aa12.1□□□□□ -0.47
PABPC4-203ENST00000372858 H3BT86 120 aa12.09□□□□□ -0.47
PABPC4-203ENST00000372858 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
PABPC4-203ENST00000372858 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
PABPC4-203ENST00000372858 IFITM1P13164 125 aa12.09□□□□□ -0.47
PABPC4-203ENST00000372858 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
PABPC4-203ENST00000372858 Q6Q795 121 aa12.09□□□□□ -0.47
PABPC4-203ENST00000372858 SS18L2Q9UHA2 77 aa12.09□□□□□ -0.47
PABPC4-203ENST00000372858 B5MCH6 92 aa12.09□□□□□ -0.47
PABPC4-203ENST00000372858 YAE1D1Q9NRH1 226 aa12.09□□□□□ -0.47
PABPC4-203ENST00000372858 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
PABPC4-203ENST00000372858 CLEC2BQ92478 149 aa12.08□□□□□ -0.48
PABPC4-203ENST00000372858 Q9UF83 564 aa12.08□□□□□ -0.48
PABPC4-203ENST00000372858 UBE2D4Q9Y2X8 147 aa12.08□□□□□ -0.48
PABPC4-203ENST00000372858 TMEM61Q8N0U2 210 aa12.07□□□□□ -0.48
PABPC4-203ENST00000372858 CHCHD7Q9BUK0 85 aa12.07□□□□□ -0.48
PABPC4-203ENST00000372858 ACACBO00763 2458 aa12.07□□□□□ -0.48
PABPC4-203ENST00000372858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.07□□□□□ -0.48
PABPC4-203ENST00000372858 IGKV2-29A2NJV5 120 aaPredicted RBP12.07□□□□□ -0.48
PABPC4-203ENST00000372858 DSCR9P59020 149 aa12.07□□□□□ -0.48
PABPC4-203ENST00000372858 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
PABPC4-203ENST00000372858 LST1O00453 97 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 DEFB131AP59861 70 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 DUX3Q96PT4 197 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 GAGE7O76087 117 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 PRM2P04554 102 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 GAGE4Q13068 117 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 Q6ZSN1 163 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
PABPC4-203ENST00000372858 NRGNQ92686 78 aa12.05□□□□□ -0.48
PABPC4-203ENST00000372858 USP9XQ93008 2570 aaPredicted RBP12.05□□□□□ -0.48
PABPC4-203ENST00000372858 TIMM17BO60830 172 aa12.04□□□□□ -0.48
PABPC4-203ENST00000372858 DAND5Q8N907 189 aa12.04□□□□□ -0.48
PABPC4-203ENST00000372858 LINC00467Q9BRT7 94 aa12.04□□□□□ -0.48
PABPC4-203ENST00000372858 TLN2Q9Y4G6 2542 aa12.04□□□□□ -0.48
PABPC4-203ENST00000372858 VPREB3Q9UKI3 123 aa12.04□□□□□ -0.48
PABPC4-203ENST00000372858 CDKN2A-AS1Q9UH64 79 aa12.03□□□□□ -0.48
PABPC4-203ENST00000372858 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
PABPC4-203ENST00000372858 DOPEY1Q5JWR5 2465 aa12.02□□□□□ -0.48
PABPC4-203ENST00000372858 CCDC179H3BU77 68 aa12.02□□□□□ -0.49
PABPC4-203ENST00000372858 ZNF415Q09FC8 603 aa12.02□□□□□ -0.49
PABPC4-203ENST00000372858 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
PABPC4-203ENST00000372858 MRPL23Q16540 153 aaKnown RBP12.02□□□□□ -0.49
PABPC4-203ENST00000372858 SETD2Q9BYW2 2564 aaPredicted RBP12.02□□□□□ -0.49
PABPC4-203ENST00000372858 PIK3CD-AS1Q5SR53 167 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 MAPK1IP1LQ8NDC0 245 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 J3QLI3 93 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 FAM240AA0A1B0GVK7 77 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 NDUFA1O15239 70 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms