RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 FRZBQ92765 325 aa2.54□□□□□ -2
MCF2-202ENST00000370573 KCNS1Q96KK3 526 aa2.54□□□□□ -2
MCF2-202ENST00000370573 VAMP8Q9BV40 100 aa2.54□□□□□ -2
MCF2-202ENST00000370573 TIMM8BQ9Y5J9 83 aaPredicted RBP2.54□□□□□ -2
MCF2-202ENST00000370573 TENM3Q9P273 2699 aa2.53□□□□□ -2
MCF2-202ENST00000370573 TRAV9-1A0A075B6T8 112 aa2.53□□□□□ -2
MCF2-202ENST00000370573 OR5AL1P0C617 328 aa2.53□□□□□ -2
MCF2-202ENST00000370573 ASIPP42127 132 aa2.53□□□□□ -2
MCF2-202ENST00000370573 TMEM256Q8N2U0 113 aa2.53□□□□□ -2
MCF2-202ENST00000370573 C11orf72Q8NBR9 251 aa2.53□□□□□ -2
MCF2-202ENST00000370573 KIR2DL5BQ8NHK3 375 aa2.53□□□□□ -2
MCF2-202ENST00000370573 C9orf85Q96MD7 179 aa2.53□□□□□ -2
MCF2-202ENST00000370573 MEGF8Q7Z7M0 2845 aa2.53□□□□□ -2
MCF2-202ENST00000370573 IGHV4-4A0A075B6R2 117 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 A0A1B0GUT8 65 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 PLAC8L1A1L4L8 177 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 F2Z2F3 143 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 TSPAN13O95857 204 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 NTF3P20783 257 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 SLAQ13239 276 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 TMEM136Q6ZRR5 245 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 C1QTNF4Q9BXJ3 329 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 CNFNQ9BYD5 112 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 JPT2Q9H910 190 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 LAMTOR2Q9Y2Q5 125 aa2.53□□□□□ -2.01
MCF2-202ENST00000370573 J3QR89 54 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 NXPH4O95158 308 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 S100A4P26447 101 aaKnown RBP2.52□□□□□ -2.01
MCF2-202ENST00000370573 APOC4P55056 127 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 NANOS2P60321 138 aaKnown RBP2.52□□□□□ -2.01
MCF2-202ENST00000370573 DEFB135Q30KP9 77 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 RETNQ9HD89 108 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 DNAH9Q9NYC9 4486 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 M0R381 172 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 RPL13AP40429 203 aaKnown RBP2.52□□□□□ -2.01
MCF2-202ENST00000370573 HNRNPA3P51991 378 aaKnown RBP2.52□□□□□ -2.01
MCF2-202ENST00000370573 LINC00315P59091 139 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 CACNG7P62955 275 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 HBBP68871 147 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 TWIST1Q15672 202 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 PMCHL1Q16048 86 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 ZNF493Q6ZR52 646 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 GTF2H5Q6ZYL4 71 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 ATP5L2Q7Z4Y8 100 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 SBSPONQ8IVN8 264 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 GATD1Q8NB37 220 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 GNB1LQ9BYB4 327 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 PHLDA3Q9Y5J5 127 aa2.52□□□□□ -2.01
MCF2-202ENST00000370573 COL7A1Q02388 2944 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 HUWE1Q7Z6Z7 4374 aaKnown RBP2.51□□□□□ -2.01
MCF2-202ENST00000370573 M0R2P5 195 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 SIVA1O15304 175 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 ATP5LO75964 103 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 EVI2AP22794 236 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 RRN3P1Q2M238 152 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 KIAA1644Q3SXP7 199 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 COX19Q49B96 90 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 DEFB121Q5J5C9 76 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 SPANXN1Q5VSR9 72 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 RASL11AQ6T310 242 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 POM121L12Q8N7R1 296 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 TMEM263Q8WUH6 116 aaKnown RBP2.51□□□□□ -2.01
MCF2-202ENST00000370573 PTH2Q96A98 100 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 RNF185Q96GF1 192 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 RCHY1Q96PM5 261 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 SIGMAR1Q99720 223 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 SAMD10Q9BYL1 202 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 MRPL16Q9NX20 251 aaKnown RBP2.51□□□□□ -2.01
MCF2-202ENST00000370573 TRAPPC1Q9Y5R8 145 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 KIF25-AS1Q9Y6Z4 181 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 A0A1B0GW15 77 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 SMIM9A6NGZ8 99 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 DEFB4AO15263 64 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 GAS8-AS1O95177 125 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 CRYGDP07320 174 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 DAZ2Q13117 558 aaKnown RBP2.51□□□□□ -2.01
MCF2-202ENST00000370573 VAMP3Q15836 100 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 ZNF876PQ49A33 203 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 PDZD11Q5EBL8 140 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 FAM104BQ5XKR9 115 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 Q6ZTI0 123 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 AMN1Q8IY45 258 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 C14orf178Q8N769 122 aaPredicted RBP2.51□□□□□ -2.01
MCF2-202ENST00000370573 Q8NAQ8 132 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 RASL10AQ92737 203 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 BORCS7Q96B45 105 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 MRAP2Q96G30 205 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 C16orf74Q96GX8 76 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 TMEM191AQ9H0A3 160 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 NOP10Q9NPE3 64 aaKnown RBP2.51□□□□□ -2.01
MCF2-202ENST00000370573 SPANXCQ9NY87 97 aa2.51□□□□□ -2.01
MCF2-202ENST00000370573 NACAE9PAV3 2078 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 SMKR1H3BMG3 65 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 HLA-DQA1P01909 254 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 APCSP02743 223 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 GATA1P15976 413 aaPredicted RBP2.5□□□□□ -2.01
MCF2-202ENST00000370573 EMP1P54849 157 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 LAGE3Q14657 143 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 MRPL51Q4U2R6 128 aaKnown RBP2.5□□□□□ -2.01
MCF2-202ENST00000370573 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms