RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 C20orf203Q8NBC4 194 aa12.66□□□□□ -0.38
LMNA-205ENST00000368299 IL17DQ8TAD2 202 aa12.66□□□□□ -0.38
LMNA-205ENST00000368299 C19orf73Q9NVV2 129 aa12.66□□□□□ -0.38
LMNA-205ENST00000368299 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
LMNA-205ENST00000368299 IGHV3OR16-12A0A075B7B8 117 aa12.65□□□□□ -0.38
LMNA-205ENST00000368299 AZU1P20160 251 aa12.65□□□□□ -0.38
LMNA-205ENST00000368299 KRTAP10-3P60369 221 aa12.65□□□□□ -0.38
LMNA-205ENST00000368299 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
LMNA-205ENST00000368299 G3V4G9 280 aa12.65□□□□□ -0.38
LMNA-205ENST00000368299 IGHV3-53P01767 116 aa12.65□□□□□ -0.38
LMNA-205ENST00000368299 OR11H2Q8NH07 326 aa12.65□□□□□ -0.38
LMNA-205ENST00000368299 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
LMNA-205ENST00000368299 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
LMNA-205ENST00000368299 P0DMU3 169 aa12.64□□□□□ -0.39
LMNA-205ENST00000368299 FAM231AP0DMU4 169 aa12.64□□□□□ -0.39
LMNA-205ENST00000368299 FAM231CP0DMU5 169 aa12.64□□□□□ -0.39
LMNA-205ENST00000368299 COTL1Q14019 142 aa12.64□□□□□ -0.39
LMNA-205ENST00000368299 DEFB104AQ8WTQ1 72 aa12.64□□□□□ -0.39
LMNA-205ENST00000368299 E9PLD3 99 aa12.64□□□□□ -0.39
LMNA-205ENST00000368299 NOTCH2Q04721 2471 aa12.64□□□□□ -0.39
LMNA-205ENST00000368299 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
LMNA-205ENST00000368299 LINC00482Q8N8I6 264 aa12.63□□□□□ -0.39
LMNA-205ENST00000368299 HIST1H4GQ99525 98 aa12.63□□□□□ -0.39
LMNA-205ENST00000368299 TRBV7-3A0A075B6L6 115 aa12.63□□□□□ -0.39
LMNA-205ENST00000368299 OTOGQ6ZRI0 2925 aa12.63□□□□□ -0.39
LMNA-205ENST00000368299 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
LMNA-205ENST00000368299 IGLL5B9A064 214 aa12.62□□□□□ -0.39
LMNA-205ENST00000368299 GIG44P09565 113 aaPredicted RBP12.62□□□□□ -0.39
LMNA-205ENST00000368299 Q6ZSN1 163 aa12.62□□□□□ -0.39
LMNA-205ENST00000368299 SETXQ7Z333 2677 aaKnown RBP12.61□□□□□ -0.39
LMNA-205ENST00000368299 IGLV4-69A0A075B6H9 119 aa12.61□□□□□ -0.39
LMNA-205ENST00000368299 TRGV1A0A0A0MS02 117 aa12.6□□□□□ -0.39
LMNA-205ENST00000368299 WFDC10AQ9H1F0 79 aa12.6□□□□□ -0.39
LMNA-205ENST00000368299 PYGO1Q9Y3Y4 419 aa12.6□□□□□ -0.39
LMNA-205ENST00000368299 A0A1B0GWB2 263 aa12.6□□□□□ -0.39
LMNA-205ENST00000368299 C16orf74Q96GX8 76 aa12.6□□□□□ -0.39
LMNA-205ENST00000368299 ZNF479Q96JC4 524 aa12.6□□□□□ -0.39
LMNA-205ENST00000368299 NACAE9PAV3 2078 aa12.59□□□□□ -0.39
LMNA-205ENST00000368299 RPL35AP18077 110 aaKnown RBP12.59□□□□□ -0.39
LMNA-205ENST00000368299 INSL3P51460 131 aa12.59□□□□□ -0.39
LMNA-205ENST00000368299 HERVK_113P61574 105 aa12.59□□□□□ -0.39
LMNA-205ENST00000368299 DAZ2Q13117 558 aaKnown RBP12.59□□□□□ -0.39
LMNA-205ENST00000368299 C11orf86A6NJI1 115 aa12.59□□□□□ -0.39
LMNA-205ENST00000368299 PRADC1Q9BSG0 188 aa12.59□□□□□ -0.39
LMNA-205ENST00000368299 CRLF1O75462 422 aa12.58□□□□□ -0.4
LMNA-205ENST00000368299 CRYBA4P53673 196 aa12.58□□□□□ -0.4
LMNA-205ENST00000368299 TRAV4A0A0B4J268 109 aa12.57□□□□□ -0.4
LMNA-205ENST00000368299 A6NJY4 79 aa12.57□□□□□ -0.4
LMNA-205ENST00000368299 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
LMNA-205ENST00000368299 NFE4Q86UQ8 179 aa12.57□□□□□ -0.4
LMNA-205ENST00000368299 VCX2Q9H322 139 aa12.57□□□□□ -0.4
LMNA-205ENST00000368299 IGLV4-3A0A075B6K6 122 aa12.56□□□□□ -0.4
LMNA-205ENST00000368299 RRN3P1Q2M238 152 aa12.56□□□□□ -0.4
LMNA-205ENST00000368299 Q6ZTI0 123 aa12.56□□□□□ -0.4
LMNA-205ENST00000368299 TRBV10-1A0A0K0K1A3 114 aa12.55□□□□□ -0.4
LMNA-205ENST00000368299 F8W1H4 67 aa12.55□□□□□ -0.4
LMNA-205ENST00000368299 Q9UF83 564 aa12.55□□□□□ -0.4
LMNA-205ENST00000368299 ZNF815PA8K554 130 aa12.55□□□□□ -0.4
LMNA-205ENST00000368299 NOP10Q9NPE3 64 aaKnown RBP12.55□□□□□ -0.4
LMNA-205ENST00000368299 CIDEAO60543 219 aa12.54□□□□□ -0.4
LMNA-205ENST00000368299 EMP1P54849 157 aa12.54□□□□□ -0.4
LMNA-205ENST00000368299 C9orf66Q5T8R8 295 aa12.54□□□□□ -0.4
LMNA-205ENST00000368299 ZNRF2Q8NHG8 242 aa12.54□□□□□ -0.4
LMNA-205ENST00000368299 OPRPNQ99935 248 aaPredicted RBP12.54□□□□□ -0.4
LMNA-205ENST00000368299 CHCHD7Q9BUK0 85 aa12.54□□□□□ -0.4
LMNA-205ENST00000368299 SPANXA1Q9NS26 97 aa12.54□□□□□ -0.4
LMNA-205ENST00000368299 NSD1Q96L73 2696 aaPredicted RBP12.54□□□□□ -0.4
LMNA-205ENST00000368299 TEX48A0A1B0GUV7 120 aa12.54□□□□□ -0.4
LMNA-205ENST00000368299 RPL24P83731 157 aaKnown RBP12.54□□□□□ -0.4
LMNA-205ENST00000368299 TMEM170BQ5T4T1 132 aa12.54□□□□□ -0.4
LMNA-205ENST00000368299 OVOL2Q9BRP0 275 aa12.53□□□□□ -0.4
LMNA-205ENST00000368299 PLAC8L1A1L4L8 177 aa12.53□□□□□ -0.4
LMNA-205ENST00000368299 K7EQD1 137 aa12.53□□□□□ -0.4
LMNA-205ENST00000368299 AMELXQ99217 191 aa12.53□□□□□ -0.4
LMNA-205ENST00000368299 RPL36AP83881 106 aaKnown RBP12.52□□□□□ -0.41
LMNA-205ENST00000368299 SCGB1D4Q6XE38 83 aa12.52□□□□□ -0.41
LMNA-205ENST00000368299 RPL36ALQ969Q0 106 aaKnown RBP12.52□□□□□ -0.41
LMNA-205ENST00000368299 C2CD3Q4AC94 2353 aa12.51□□□□□ -0.41
LMNA-205ENST00000368299 NIPBLQ6KC79 2804 aaeCLIP12.51□□□□□ -0.415e-6■■■■□ 20.4
LMNA-205ENST00000368299 H3BMG7 143 aa12.51□□□□□ -0.41
LMNA-205ENST00000368299 UBE2D4Q9Y2X8 147 aa12.51□□□□□ -0.41
LMNA-205ENST00000368299 PLEKHB2Q96CS7 222 aa12.5□□□□□ -0.41
LMNA-205ENST00000368299 JMJD1CQ15652 2540 aa12.5□□□□□ -0.41
LMNA-205ENST00000368299 FN1P02751 2386 aaKnown RBP12.5□□□□□ -0.41
LMNA-205ENST00000368299 WFDC2Q14508 124 aa12.5□□□□□ -0.41
LMNA-205ENST00000368299 DAZ4Q86SG3 579 aaKnown RBP12.5□□□□□ -0.41
LMNA-205ENST00000368299 CITED1Q99966 193 aa12.5□□□□□ -0.41
LMNA-205ENST00000368299 DAZ3Q9NR90 486 aaKnown RBP12.5□□□□□ -0.41
LMNA-205ENST00000368299 SPANXB1Q9NS25 103 aaPredicted RBP12.5□□□□□ -0.41
LMNA-205ENST00000368299 TRGV2A0A075B6R0 118 aa12.49□□□□□ -0.41
LMNA-205ENST00000368299 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
LMNA-205ENST00000368299 UBE2D1P51668 147 aa12.49□□□□□ -0.41
LMNA-205ENST00000368299 FAM104AQ969W3 186 aa12.49□□□□□ -0.41
LMNA-205ENST00000368299 SRSF9Q13242 221 aaKnown RBP eCLIP12.48□□□□□ -0.41
LMNA-205ENST00000368299 SLC25A29Q8N8R3 303 aa12.48□□□□□ -0.41
LMNA-205ENST00000368299 TIMM21Q9BVV7 248 aa12.48□□□□□ -0.41
LMNA-205ENST00000368299 TMEM223A0PJW6 202 aa12.48□□□□□ -0.41
LMNA-205ENST00000368299 GAGE7O76087 117 aa12.48□□□□□ -0.41
LMNA-205ENST00000368299 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
LMNA-205ENST00000368299 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms