RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 FAM104BQ5XKR9 115 aa14.89□□□□□ -0.03
ECHDC1-203ENST00000368291 MRPL54Q6P161 138 aaKnown RBP14.89□□□□□ -0.03
ECHDC1-203ENST00000368291 A0A1B0GW15 77 aa14.88□□□□□ -0.03
ECHDC1-203ENST00000368291 SMKR1H3BMG3 65 aa14.88□□□□□ -0.03
ECHDC1-203ENST00000368291 WFDC2Q14508 124 aa14.88□□□□□ -0.03
ECHDC1-203ENST00000368291 ANAPC16Q96DE5 110 aa14.88□□□□□ -0.03
ECHDC1-203ENST00000368291 NCR2O95944 276 aa14.87□□□□□ -0.03
ECHDC1-203ENST00000368291 AMTP48728 403 aa14.87□□□□□ -0.03
ECHDC1-203ENST00000368291 POLR2KP53803 58 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-203ENST00000368291 MRPL51Q4U2R6 128 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-203ENST00000368291 TMEM70Q9BUB7 260 aa14.87□□□□□ -0.03
ECHDC1-203ENST00000368291 IGKV2D-24A0A075B6R9 120 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 MT-ND4LP03901 98 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 Q0VG73 95 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 COMMD7Q86VX2 200 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 NRACQ8N912 160 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 C20orf203Q8NBC4 194 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 ST20Q9HBF5 79 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 PRR34Q9NV39 138 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 PGPEP1Q9NXJ5 209 aa14.86□□□□□ -0.03
ECHDC1-203ENST00000368291 IGLV4-60A0A075B6I1 120 aa14.85□□□□□ -0.03
ECHDC1-203ENST00000368291 A0A1B0GUV1 79 aa14.85□□□□□ -0.03
ECHDC1-203ENST00000368291 HBBP68871 147 aa14.85□□□□□ -0.03
ECHDC1-203ENST00000368291 LINC00862A6NCI5 91 aa14.85□□□□□ -0.03
ECHDC1-203ENST00000368291 I3L3M4 83 aa14.85□□□□□ -0.03
ECHDC1-203ENST00000368291 RMI2Q96E14 147 aa14.85□□□□□ -0.03
ECHDC1-203ENST00000368291 COX11Q9Y6N1 276 aa14.85□□□□□ -0.03
ECHDC1-203ENST00000368291 F8W036 122 aa14.84□□□□□ -0.03
ECHDC1-203ENST00000368291 CRPP02741 224 aa14.84□□□□□ -0.03
ECHDC1-203ENST00000368291 PMCHP20382 165 aa14.84□□□□□ -0.03
ECHDC1-203ENST00000368291 LINC00269Q8N2A0 174 aa14.84□□□□□ -0.03
ECHDC1-203ENST00000368291 TRBV27A0A0K0K1C4 114 aa14.83□□□□□ -0.04
ECHDC1-203ENST00000368291 TSHBP01222 138 aa14.83□□□□□ -0.04
ECHDC1-203ENST00000368291 CDPF1Q6NVV7 123 aa14.83□□□□□ -0.04
ECHDC1-203ENST00000368291 CLPSL2Q6UWE3 100 aa14.83□□□□□ -0.04
ECHDC1-203ENST00000368291 ATP5L2Q7Z4Y8 100 aa14.83□□□□□ -0.04
ECHDC1-203ENST00000368291 Q8N814 137 aa14.83□□□□□ -0.04
ECHDC1-203ENST00000368291 SEC11CQ9BY50 192 aa14.83□□□□□ -0.04
ECHDC1-203ENST00000368291 HERC2O95714 4834 aa14.83□□□□□ -0.04
ECHDC1-203ENST00000368291 APCSP02743 223 aa14.82□□□□□ -0.04
ECHDC1-203ENST00000368291 S100A8P05109 93 aa14.82□□□□□ -0.04
ECHDC1-203ENST00000368291 BAALCQ8WXS3 180 aa14.82□□□□□ -0.04
ECHDC1-203ENST00000368291 HSPG2P98160 4391 aa14.81□□□□□ -0.04
ECHDC1-203ENST00000368291 UBE2L6O14933 153 aa14.81□□□□□ -0.04
ECHDC1-203ENST00000368291 LECT2O14960 151 aa14.81□□□□□ -0.04
ECHDC1-203ENST00000368291 MIAQ16674 131 aa14.81□□□□□ -0.04
ECHDC1-203ENST00000368291 C1orf43Q9BWL3 253 aa14.81□□□□□ -0.04
ECHDC1-203ENST00000368291 TMEM242Q9NWH2 141 aa14.81□□□□□ -0.04
ECHDC1-203ENST00000368291 APOBP04114 4563 aaKnown RBP14.8□□□□□ -0.04
ECHDC1-203ENST00000368291 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-203ENST00000368291 IGKV2-29A2NJV5 120 aaPredicted RBP14.8□□□□□ -0.04
ECHDC1-203ENST00000368291 ESDP10768 282 aa14.8□□□□□ -0.04
ECHDC1-203ENST00000368291 SUMO2P61956 95 aaKnown RBP14.8□□□□□ -0.04
ECHDC1-203ENST00000368291 KRTAP26-1Q6PEX3 210 aa14.8□□□□□ -0.04
ECHDC1-203ENST00000368291 PPP1R17O96001 155 aa14.79□□□□□ -0.04
ECHDC1-203ENST00000368291 REG3AQ06141 175 aa14.79□□□□□ -0.04
ECHDC1-203ENST00000368291 TRBV24-1A0A075B6N3 115 aa14.78□□□□□ -0.04
ECHDC1-203ENST00000368291 H7C423 109 aa14.78□□□□□ -0.04
ECHDC1-203ENST00000368291 CKS2P33552 79 aa14.78□□□□□ -0.04
ECHDC1-203ENST00000368291 RYR1P21817 5038 aa14.78□□□□□ -0.04
ECHDC1-203ENST00000368291 VCYO14598 125 aa14.77□□□□□ -0.04
ECHDC1-203ENST00000368291 C10orf91Q5T1B1 145 aa14.77□□□□□ -0.04
ECHDC1-203ENST00000368291 D6R8Y8 96 aa14.76□□□□□ -0.05
ECHDC1-203ENST00000368291 CDK2AP2O75956 126 aa14.76□□□□□ -0.05
ECHDC1-203ENST00000368291 NTN5Q8WTR8 489 aaPredicted RBP14.76□□□□□ -0.05
ECHDC1-203ENST00000368291 TNFRSF6BO95407 300 aa14.75□□□□□ -0.05
ECHDC1-203ENST00000368291 FGF6P10767 208 aa14.75□□□□□ -0.05
ECHDC1-203ENST00000368291 KRTAP10-1P60331 282 aa14.75□□□□□ -0.05
ECHDC1-203ENST00000368291 BTF3L4Q96K17 158 aa14.75□□□□□ -0.05
ECHDC1-203ENST00000368291 IMMP2LQ96T52 175 aa14.75□□□□□ -0.05
ECHDC1-203ENST00000368291 C20orf78Q9BR46 151 aa14.75□□□□□ -0.05
ECHDC1-203ENST00000368291 IGLV5-52A0A0A0MRZ9 124 aa14.74□□□□□ -0.05
ECHDC1-203ENST00000368291 NPYP01303 97 aa14.74□□□□□ -0.05
ECHDC1-203ENST00000368291 CTDSP1Q9GZU7 261 aa14.74□□□□□ -0.05
ECHDC1-203ENST00000368291 IGLV10-54A0A075B6I4 117 aa14.73□□□□□ -0.05
ECHDC1-203ENST00000368291 RPL32P62910 135 aaKnown RBP14.73□□□□□ -0.05
ECHDC1-203ENST00000368291 CARHSP1Q9Y2V2 147 aaKnown RBP14.73□□□□□ -0.05
ECHDC1-203ENST00000368291 PPBPP02775 128 aa14.73□□□□□ -0.05
ECHDC1-203ENST00000368291 GCSHP23434 173 aa14.73□□□□□ -0.05
ECHDC1-203ENST00000368291 AMMECR1LQ6DCA0 310 aa14.73□□□□□ -0.05
ECHDC1-203ENST00000368291 RNASEKQ6P5S7 137 aaKnown RBP14.73□□□□□ -0.05
ECHDC1-203ENST00000368291 TRAV8-4A0A0B4J246 113 aa14.72□□□□□ -0.05
ECHDC1-203ENST00000368291 C7orf77A4D0Y5 90 aa14.72□□□□□ -0.05
ECHDC1-203ENST00000368291 HLA-DQA1P01909 254 aa14.72□□□□□ -0.05
ECHDC1-203ENST00000368291 KRTAP17-1Q9BYP8 105 aa14.72□□□□□ -0.05
ECHDC1-203ENST00000368291 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.71□□□□□ -0.06
ECHDC1-203ENST00000368291 PHOX2AO14813 284 aa14.71□□□□□ -0.06
ECHDC1-203ENST00000368291 ZNF25P17030 456 aaPredicted RBP14.71□□□□□ -0.06
ECHDC1-203ENST00000368291 ORMDL3Q8N138 153 aa14.71□□□□□ -0.06
ECHDC1-203ENST00000368291 KIR2DL4Q99706 377 aa14.71□□□□□ -0.06
ECHDC1-203ENST00000368291 FCER1GP30273 86 aa14.7□□□□□ -0.06
ECHDC1-203ENST00000368291 TMEM136Q6ZRR5 245 aa14.7□□□□□ -0.06
ECHDC1-203ENST00000368291 MRPL52Q86TS9 123 aaKnown RBP14.7□□□□□ -0.06
ECHDC1-203ENST00000368291 SMIM2Q9BVW6 85 aa14.7□□□□□ -0.06
ECHDC1-203ENST00000368291 PRELID3AQ96N28 172 aa14.69□□□□□ -0.06
ECHDC1-203ENST00000368291 USP17L23D6RBM5 183 aa14.68□□□□□ -0.06
ECHDC1-203ENST00000368291 DNAH8Q96JB1 4490 aa14.67□□□□□ -0.06
ECHDC1-203ENST00000368291 IGKV3OR2-268A0A0C4DH90 116 aa14.67□□□□□ -0.06
ECHDC1-203ENST00000368291 CLRN3Q8NCR9 226 aa14.67□□□□□ -0.06
ECHDC1-203ENST00000368291 TRAV9-1A0A075B6T8 112 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms