RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PROK2Q9HC23 129 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 C9orf66Q5T8R8 295 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 MAPK1IP1LQ8NDC0 245 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 NTN5Q8WTR8 489 aaPredicted RBP2.84□□□□□ -1.95
SYNE1-207ENST00000367255 TOMM7Q9P0U1 55 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 KIAA1549LQ6ZVL6 1849 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 CLEC19AQ6UXS0 136 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 ITLN1Q8WWA0 313 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 FGF23Q9GZV9 251 aaPredicted RBP2.84□□□□□ -1.95
SYNE1-207ENST00000367255 IGHV3-30-3P0DP02 117 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 SPTBN4Q9H254 2564 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 PRR14LQ5THK1 2151 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 CEP295Q9C0D2 2601 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 SBF1O95248 1867 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 TANC1Q9C0D5 1861 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 IGLV1-47P01700 117 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 RHPN1-AS1Q9BWJ2 59 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 CASP8AP2Q9UKL3 1982 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 BTAF1O14981 1849 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 DEFB124Q8NES8 71 aa2.84□□□□□ -1.95
SYNE1-207ENST00000367255 PLXNB1O43157 2135 aa2.84□□□□□ -1.96
SYNE1-207ENST00000367255 GNRH2O43555 120 aa2.84□□□□□ -1.96
SYNE1-207ENST00000367255 IGHV1-46P01743 117 aa2.84□□□□□ -1.96
SYNE1-207ENST00000367255 SHISA2Q6UWI4 295 aa2.84□□□□□ -1.96
SYNE1-207ENST00000367255 GAFA1Q96PS6 74 aa2.84□□□□□ -1.96
SYNE1-207ENST00000367255 FN1P02751 2386 aaKnown RBP2.84□□□□□ -1.96
SYNE1-207ENST00000367255 NLRC5Q86WI3 1866 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 IGKV3D-7A0A0C4DH55 119 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 Q6ZR03 302 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 C20orf197Q8N268 126 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 KIF26AQ9ULI4 1882 aaPredicted RBP2.83□□□□□ -1.96
SYNE1-207ENST00000367255 POLR2KP53803 58 aaKnown RBP2.83□□□□□ -1.96
SYNE1-207ENST00000367255 LINC00308Q8TCZ7 52 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 BRWD3Q6RI45 1802 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 KLHL30-AS1Q8NEE0 82 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 A0A087WWL8 130 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 C10orf142B7Z368 130 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 Q8N2B8 174 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 C2orf48Q96LS8 159 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 PTPRDP23468 1912 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 EGFEM1PQ0D2K5 195 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 CLPSL1A2RUU4 121 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 TMEM254Q8TBM7 123 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 COX7B2Q8TF08 81 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 PSME4Q14997 1843 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 ADORA2A-AS1P86434 159 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 ODF3BA8MYP8 253 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 OTOGLQ3ZCN5 2332 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 XGP55808 180 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 PCP2Q8IVA1 136 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 FAM120AOSQ5T036 256 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 CLEC2BQ92478 149 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 U3KQE9 123 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 COL5A3P25940 1745 aaPredicted RBP2.83□□□□□ -1.96
SYNE1-207ENST00000367255 LINC01356Q8N9X3 169 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 LOC100131303A0A0U1RQF7 123 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 M0QY20 66 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 TMEM131Q92545 1883 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 IGIPA6NJ69 53 aa2.83□□□□□ -1.96
SYNE1-207ENST00000367255 PLXND1Q9Y4D7 1925 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 ZGRF1Q86YA3 2104 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 ATP6V0E1O15342 81 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 COL4A3Q01955 1670 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 LYPD2Q6UXB3 125 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 PLXNB2O15031 1838 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 EML6Q6ZMW3 1958 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 M0R378 163 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 IGLV2-8P01709 118 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 COX7BP24311 80 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 RPL35AP18077 110 aaKnown RBP2.82□□□□□ -1.96
SYNE1-207ENST00000367255 DENND4CQ5VZ89 1909 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 DNAJC9-AS1A6NH13 148 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 BSPH1Q075Z2 132 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 GVQW2A0A096LPI5 108 aaPredicted RBP2.82□□□□□ -1.96
SYNE1-207ENST00000367255 MED13Q9UHV7 2174 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 TRGV4A0A0C4DH28 118 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 VPREB3Q9UKI3 123 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 Q8N9L7 120 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 UBR3Q6ZT12 1888 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 ZFP36P26651 326 aaKnown RBP2.82□□□□□ -1.96
SYNE1-207ENST00000367255 NRXN2Q9P2S2 1712 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 THSD7AQ9UPZ6 1657 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 IGKV1-16P04430 117 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 HEATR5AQ86XA9 2040 aa2.82□□□□□ -1.96
SYNE1-207ENST00000367255 CHKB-CPT1BH3BT56 60 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 MT-ATP8P03928 68 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 SMAD5-AS1Q9Y6J3 95 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 POLQO75417 2590 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 PHIPQ8WWQ0 1821 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 TEX49A0A1B0GTD5 131 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 IGHV4-38-2P0DP08 117 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 NTM-AS1Q6ZSK4 140 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 PRO0255Q9UI72 69 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 A8MUN3 132 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 WFDC11Q8NEX6 87 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 C14orf132Q9NPU4 83 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 IGHV3-38A0A0C4DH36 116 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 ZFYVE26Q68DK2 2539 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 SAA4P35542 130 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 PTPRFP10586 1907 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms