RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PLCE1Q9P212 2302 aa-1.45□□□□□ -2.64
RNU6-553P-201ENST00000364047 TRAV2A0A0B4J234 112 aa-1.45□□□□□ -2.64
RNU6-553P-201ENST00000364047 E7EQ34 232 aa-1.45□□□□□ -2.64
RNU6-553P-201ENST00000364047 HIST1H1BP16401 226 aaKnown RBP-1.45□□□□□ -2.64
RNU6-553P-201ENST00000364047 INSL4Q14641 139 aa-1.45□□□□□ -2.64
RNU6-553P-201ENST00000364047 NDUFA11Q86Y39 141 aa-1.45□□□□□ -2.64
RNU6-553P-201ENST00000364047 SMARCA2P51531 1590 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 A0A0D9SFI3 127 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 TCRAP04437 139 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 SLC25A6P12236 298 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 SPAG11BQ08648 103 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 FAM74A4Q5TZK3 123 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 IFI27L1Q96BM0 104 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 CNFNQ9BYD5 112 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 V9GYV3 84 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 BRCA2P51587 3418 aa-1.46□□□□□ -2.64
RNU6-553P-201ENST00000364047 SYNMO15061 1565 aa-1.47□□□□□ -2.64
RNU6-553P-201ENST00000364047 BIVM-ERCC5R4GMW8 1640 aa-1.47□□□□□ -2.64
RNU6-553P-201ENST00000364047 DNAH12Q6ZR08 3092 aa-1.47□□□□□ -2.64
RNU6-553P-201ENST00000364047 A0A1B0GW64 132 aa-1.47□□□□□ -2.64
RNU6-553P-201ENST00000364047 RPL7P18124 248 aaKnown RBP-1.47□□□□□ -2.64
RNU6-553P-201ENST00000364047 MRPS15P82914 257 aaKnown RBP-1.47□□□□□ -2.64
RNU6-553P-201ENST00000364047 TRIQKQ629K1 86 aa-1.47□□□□□ -2.64
RNU6-553P-201ENST00000364047 COX7B2Q8TF08 81 aa-1.47□□□□□ -2.64
RNU6-553P-201ENST00000364047 CEP250Q9BV73 2442 aa-1.47□□□□□ -2.65
RNU6-553P-201ENST00000364047 CCDC171Q6TFL3 1326 aa-1.47□□□□□ -2.65
RNU6-553P-201ENST00000364047 K7EQZ3 153 aa-1.48□□□□□ -2.65
RNU6-553P-201ENST00000364047 E2F6O75461 281 aa-1.48□□□□□ -2.65
RNU6-553P-201ENST00000364047 PSPHP78330 225 aa-1.48□□□□□ -2.65
RNU6-553P-201ENST00000364047 C20orf197Q8N268 126 aa-1.48□□□□□ -2.65
RNU6-553P-201ENST00000364047 SLC35B3Q9H1N7 401 aa-1.48□□□□□ -2.65
RNU6-553P-201ENST00000364047 BATF3Q9NR55 127 aa-1.48□□□□□ -2.65
RNU6-553P-201ENST00000364047 HELZP42694 1942 aaKnown RBP-1.48□□□□□ -2.65
RNU6-553P-201ENST00000364047 PKDREJQ9NTG1 2253 aa-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 TRGV1A0A0A0MS02 117 aa-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 TMEM238C9JI98 176 aa-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 KRTAP19-2Q3LHN2 52 aa-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 MYH3P11055 1940 aa-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 COL4A6Q14031 1691 aa-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 UTRNP46939 3433 aa-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 MED23Q9ULK4 1368 aa-1.49□□□□□ -2.65
RNU6-553P-201ENST00000364047 DEGS1O15121 323 aa-1.5□□□□□ -2.65
RNU6-553P-201ENST00000364047 SPINK8P0C7L1 97 aa-1.5□□□□□ -2.65
RNU6-553P-201ENST00000364047 NPC2P61916 151 aa-1.5□□□□□ -2.65
RNU6-553P-201ENST00000364047 DYNLRB2Q8TF09 96 aa-1.5□□□□□ -2.65
RNU6-553P-201ENST00000364047 SCP2D1Q9UJQ7 156 aa-1.5□□□□□ -2.65
RNU6-553P-201ENST00000364047 ERG28Q9UKR5 140 aa-1.5□□□□□ -2.65
RNU6-553P-201ENST00000364047 ARHGAP31Q2M1Z3 1444 aa-1.5□□□□□ -2.65
RNU6-553P-201ENST00000364047 CDC42BPGQ6DT37 1551 aa-1.51□□□□□ -2.65
RNU6-553P-201ENST00000364047 TNFP01375 233 aa-1.51□□□□□ -2.65
RNU6-553P-201ENST00000364047 KRTAP19-5Q3LI72 72 aa-1.51□□□□□ -2.65
RNU6-553P-201ENST00000364047 CCDC115Q96NT0 180 aa-1.51□□□□□ -2.65
RNU6-553P-201ENST00000364047 ATPIF1Q9UII2 106 aa-1.51□□□□□ -2.65
RNU6-553P-201ENST00000364047 ZNF609O15014 1411 aa-1.51□□□□□ -2.65
RNU6-553P-201ENST00000364047 DNAJC13O75165 2243 aa-1.51□□□□□ -2.65
RNU6-553P-201ENST00000364047 XIRP2A4UGR9 3374 aa-1.51□□□□□ -2.65
RNU6-553P-201ENST00000364047 MYH1P12882 1939 aa-1.52□□□□□ -2.65
RNU6-553P-201ENST00000364047 DEFB1P60022 68 aa-1.52□□□□□ -2.65
RNU6-553P-201ENST00000364047 SNX29P2Q8IUI4 249 aa-1.52□□□□□ -2.65
RNU6-553P-201ENST00000364047 CFAP47Q6ZTR5 3102 aa-1.52□□□□□ -2.65
RNU6-553P-201ENST00000364047 ROCK1Q13464 1354 aa-1.53□□□□□ -2.65
RNU6-553P-201ENST00000364047 FER1L6Q2WGJ9 1857 aa-1.53□□□□□ -2.65
RNU6-553P-201ENST00000364047 OR9Q1Q8NGQ5 310 aa-1.53□□□□□ -2.65
RNU6-553P-201ENST00000364047 M0R2T5 61 aa-1.54□□□□□ -2.66
RNU6-553P-201ENST00000364047 SPRR1AP35321 89 aa-1.54□□□□□ -2.66
RNU6-553P-201ENST00000364047 Q8IZM0 81 aa-1.54□□□□□ -2.66
RNU6-553P-201ENST00000364047 PCBD2Q9H0N5 130 aa-1.54□□□□□ -2.66
RNU6-553P-201ENST00000364047 NOP16Q9Y3C1 178 aaKnown RBP-1.54□□□□□ -2.66
RNU6-553P-201ENST00000364047 KNL1Q8NG31 2342 aa-1.54□□□□□ -2.66
RNU6-553P-201ENST00000364047 G3V318 75 aa-1.55□□□□□ -2.66
RNU6-553P-201ENST00000364047 TMEM91Q6ZNR0 172 aa-1.55□□□□□ -2.66
RNU6-553P-201ENST00000364047 ATP6V0E2Q8NHE4 81 aa-1.55□□□□□ -2.66
RNU6-553P-201ENST00000364047 DNAJC15Q9Y5T4 150 aa-1.55□□□□□ -2.66
RNU6-553P-201ENST00000364047 DOCK11Q5JSL3 2073 aa-1.55□□□□□ -2.66
RNU6-553P-201ENST00000364047 PTPRMP28827 1452 aa-1.56□□□□□ -2.66
RNU6-553P-201ENST00000364047 GOLGA3Q08378 1498 aa-1.56□□□□□ -2.66
RNU6-553P-201ENST00000364047 KIAA0100Q14667 2235 aaKnown RBP-1.56□□□□□ -2.66
RNU6-553P-201ENST00000364047 TRAV22A0A0B4J277 110 aa-1.56□□□□□ -2.66
RNU6-553P-201ENST00000364047 TRBV10-3A0A0K0K1G6 114 aa-1.56□□□□□ -2.66
RNU6-553P-201ENST00000364047 ZNF142P52746 1687 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-553P-201ENST00000364047 CALML5Q9NZT1 146 aa-1.57□□□□□ -2.66
RNU6-553P-201ENST00000364047 TRAV12-3A0A0B4J271 114 aa-1.58□□□□□ -2.66
RNU6-553P-201ENST00000364047 CCDC179H3BU77 68 aa-1.58□□□□□ -2.66
RNU6-553P-201ENST00000364047 G0S2P27469 103 aa-1.58□□□□□ -2.66
RNU6-553P-201ENST00000364047 ASPMQ8IZT6 3477 aa-1.58□□□□□ -2.66
RNU6-553P-201ENST00000364047 FMN2Q9NZ56 1722 aa-1.58□□□□□ -2.66
RNU6-553P-201ENST00000364047 VPS13AQ96RL7 3174 aa-1.58□□□□□ -2.66
RNU6-553P-201ENST00000364047 BORCS7-ASMTA0A0B4J1R7 106 aa-1.59□□□□□ -2.66
RNU6-553P-201ENST00000364047 LCE6AA0A183 80 aa-1.59□□□□□ -2.66
RNU6-553P-201ENST00000364047 RBP4P02753 201 aa-1.59□□□□□ -2.66
RNU6-553P-201ENST00000364047 UHRF1BP1LA0JNW5 1464 aa-1.59□□□□□ -2.66
RNU6-553P-201ENST00000364047 CASZ1Q86V15 1759 aa-1.59□□□□□ -2.66
RNU6-553P-201ENST00000364047 ARAP1Q96P48 1450 aa-1.6□□□□□ -2.67
RNU6-553P-201ENST00000364047 E5RI56 91 aa-1.6□□□□□ -2.67
RNU6-553P-201ENST00000364047 PIN1P1O15428 100 aa-1.6□□□□□ -2.67
RNU6-553P-201ENST00000364047 DPM2O94777 84 aa-1.6□□□□□ -2.67
RNU6-553P-201ENST00000364047 TMEM35BQ8NCS4 154 aa-1.6□□□□□ -2.67
RNU6-553P-201ENST00000364047 CENPFP49454 3210 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 DEFB4AO15263 64 aa-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms