RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 RNASE4P34096 147 aaKnown RBP2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 RRAS2P62070 204 aaPredicted RBP2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 AKR1C1Q04828 323 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 SLC38A11Q08AI6 406 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 SPCS2Q15005 226 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 TMEM241Q24JQ0 296 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 LCN15Q6UWW0 184 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 TMEM14EPQ6UXP3 125 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 TMEM136Q6ZRR5 245 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 SCXQ7RTU7 201 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 LINC00305Q7Z4B0 112 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 IQCF2Q8IXL9 164 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 EIF4E3Q8N5X7 224 aaKnown RBP2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 YPEL4Q96NS1 127 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 ODF3Q96PU9 254 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 MGST2Q99735 147 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 PRRT1Q99946 306 aa2.96□□□□□ -1.94
RNU4-39P-201ENST00000362455 A0A087WXM4 84 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 DUXBA0A1W2PPF3 345 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 K7EP13 123 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 RGS5O15539 181 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 EVI2AP22794 236 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 MRPS10P82664 201 aaKnown RBP2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 CD164Q04900 197 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 BAXQ07812 192 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 PPP1R1AQ13522 171 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 TMEM128Q5BJH2 165 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 IBA57Q5T440 356 aaKnown RBP2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 DNAJC30Q96LL9 226 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 CIB3Q96Q77 187 aaPredicted RBP2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 SLC50A1Q9BRV3 221 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 Q9H521 79 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 NPVFQ9HCQ7 196 aa2.95□□□□□ -1.94
RNU4-39P-201ENST00000362455 TRBV19A0A075B6N1 114 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 IGKV2-40A0A087WW87 121 aaPredicted RBP2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 LECT2O14960 151 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 SFT2D2O95562 160 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 IGKV2D-40P01614 121 aaPredicted RBP2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 PFN1P07737 140 aaKnown RBP2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 OR4E1P0C645 316 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 METTL15P1P0C7V9 234 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 IL15RAQ13261 267 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 LINC01556Q5JQF7 62 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 MIC13Q5XKP0 118 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 BPIFA4PQ86YQ2 179 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 EXOC3-AS1Q8N2X6 119 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 ZNF680Q8NEM1 530 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 OR10P1Q8NGE3 313 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 RAB2BQ8WUD1 216 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 FXYD5Q96DB9 178 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 DIRAS2Q96HU8 199 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 SLC25A31Q9H0C2 315 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 C11orf1Q9H5F2 150 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 PSENENQ9NZ42 101 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 SCP2D1Q9UJQ7 156 aa2.94□□□□□ -1.94
RNU4-39P-201ENST00000362455 FNDC10F2Z333 226 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 SSSCA1O60232 199 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 PYYP10082 97 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 SRIP30626 198 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 C1orf64Q8NEQ6 169 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 Q8TAT8 98 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 DYNC2LI1Q8TCX1 351 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 AP3S1Q92572 193 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 FAM167A-AS1Q96KT0 104 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 ANAPC13Q9BS18 74 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 PXMP4Q9Y6I8 212 aa2.93□□□□□ -1.94
RNU4-39P-201ENST00000362455 TRGV4A0A0C4DH28 118 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 C9orf170A2RU37 121 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 PGPA6NDG6 321 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 GNRH2O43555 120 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 PSCAO43653 123 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 IGHV3-30P01768 117 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 IGHV3-33P01772 117 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 GPX1P07203 203 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 NMBP08949 121 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 SCGB1C2P0DMR2 95 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 IGHV3-30-3P0DP02 117 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 IGHV3-30-5P0DP03 117 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 S100A7P31151 101 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 HBG1P69891 147 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 HBG2P69892 147 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 ZNF846Q147U1 533 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 C10orf113Q5VZT2 155 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 DPPA3Q6W0C5 159 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 MRPL52Q86TS9 123 aaKnown RBP2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 C10orf126Q8N4M7 172 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 SCGB1C1Q8TD33 95 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 ZNF492Q9P255 531 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 V9GYH0 126 aa2.92□□□□□ -1.94
RNU4-39P-201ENST00000362455 TRAV4A0A0B4J268 109 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 M0QXV9 152 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 ORM1P02763 201 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 HIST1H1EP10412 219 aaKnown RBP2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 TAS2R30P59541 319 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 FLI1Q01543 452 aaPredicted RBP2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 GUK1Q16774 197 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 OR10J3Q5JRS4 329 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 TVP23CQ96ET8 276 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms