RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
CCDC7-203ENST00000362006 DEFB131BA0A096LNP1 70 aa12.62□□□□□ -0.39
CCDC7-203ENST00000362006 A0A0J9YY99 117 aa12.62□□□□□ -0.39
CCDC7-203ENST00000362006 FABP4P15090 132 aa12.62□□□□□ -0.39
CCDC7-203ENST00000362006 MRPL23Q16540 153 aaKnown RBP12.62□□□□□ -0.39
CCDC7-203ENST00000362006 PHLDA1Q8WV24 401 aaPredicted RBP12.62□□□□□ -0.39
CCDC7-203ENST00000362006 DNAH9Q9NYC9 4486 aa12.62□□□□□ -0.39
CCDC7-203ENST00000362006 PMCHL1Q16048 86 aa12.61□□□□□ -0.39
CCDC7-203ENST00000362006 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
CCDC7-203ENST00000362006 IFITM10A6NMD0 228 aa12.61□□□□□ -0.39
CCDC7-203ENST00000362006 ATP6V0E2Q8NHE4 81 aa12.61□□□□□ -0.39
CCDC7-203ENST00000362006 ICOSQ9Y6W8 199 aa12.61□□□□□ -0.39
CCDC7-203ENST00000362006 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
CCDC7-203ENST00000362006 LEPROTL1O95214 131 aa12.6□□□□□ -0.39
CCDC7-203ENST00000362006 A0A096LNJ9 63 aa12.59□□□□□ -0.39
CCDC7-203ENST00000362006 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
CCDC7-203ENST00000362006 HSPB8Q9UJY1 196 aa12.59□□□□□ -0.39
CCDC7-203ENST00000362006 LOC105371267A0A1B0GV96 52 aa12.59□□□□□ -0.39
CCDC7-203ENST00000362006 TOMM6Q96B49 74 aa12.58□□□□□ -0.4
CCDC7-203ENST00000362006 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
CCDC7-203ENST00000362006 MEGF8Q7Z7M0 2845 aa12.58□□□□□ -0.4
CCDC7-203ENST00000362006 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
CCDC7-203ENST00000362006 C20orf203Q8NBC4 194 aa12.57□□□□□ -0.4
CCDC7-203ENST00000362006 DEFB104AQ8WTQ1 72 aa12.56□□□□□ -0.4
CCDC7-203ENST00000362006 ATP5LO75964 103 aa12.55□□□□□ -0.4
CCDC7-203ENST00000362006 OR10D4PQ8NGN7 298 aa12.55□□□□□ -0.4
CCDC7-203ENST00000362006 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
CCDC7-203ENST00000362006 TRBV25-1A0A075B6N4 114 aa12.55□□□□□ -0.4
CCDC7-203ENST00000362006 A0A096LPF7 62 aa12.55□□□□□ -0.4
CCDC7-203ENST00000362006 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
CCDC7-203ENST00000362006 SMAGPQ0VAQ4 97 aa12.54□□□□□ -0.4
CCDC7-203ENST00000362006 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
CCDC7-203ENST00000362006 ERASQ7Z444 233 aa12.53□□□□□ -0.4
CCDC7-203ENST00000362006 C15orf53Q8NAA6 179 aa12.53□□□□□ -0.4
CCDC7-203ENST00000362006 SCGB3A1Q96QR1 104 aa12.53□□□□□ -0.4
CCDC7-203ENST00000362006 H7C423 109 aa12.53□□□□□ -0.4
CCDC7-203ENST00000362006 TMEM243Q9BU79 118 aa12.53□□□□□ -0.4
CCDC7-203ENST00000362006 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
CCDC7-203ENST00000362006 AKR1D1P51857 326 aa12.52□□□□□ -0.4
CCDC7-203ENST00000362006 IFI27L1Q96BM0 104 aa12.52□□□□□ -0.4
CCDC7-203ENST00000362006 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.52□□□□□ -0.41
CCDC7-203ENST00000362006 TIRAPP58753 221 aa12.52□□□□□ -0.41
CCDC7-203ENST00000362006 TMEM141Q96I45 108 aa12.52□□□□□ -0.41
CCDC7-203ENST00000362006 TIMM17AQ99595 171 aa12.52□□□□□ -0.41
CCDC7-203ENST00000362006 COL7A1Q02388 2944 aa12.51□□□□□ -0.41
CCDC7-203ENST00000362006 NPSP0C0P6 89 aa12.51□□□□□ -0.41
CCDC7-203ENST00000362006 RPL39P62891 51 aaKnown RBP12.51□□□□□ -0.41
CCDC7-203ENST00000362006 PYGO1Q9Y3Y4 419 aa12.51□□□□□ -0.41
CCDC7-203ENST00000362006 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
CCDC7-203ENST00000362006 SPANXA1Q9NS26 97 aa12.5□□□□□ -0.41
CCDC7-203ENST00000362006 STAB2Q8WWQ8 2551 aa12.5□□□□□ -0.41
CCDC7-203ENST00000362006 UBE2L6O14933 153 aa12.5□□□□□ -0.41
CCDC7-203ENST00000362006 LINC00173Q6ZV60 143 aa12.5□□□□□ -0.41
CCDC7-203ENST00000362006 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
CCDC7-203ENST00000362006 IGIPA6NJ69 53 aa12.49□□□□□ -0.41
CCDC7-203ENST00000362006 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
CCDC7-203ENST00000362006 KRTDAPP60985 99 aa12.49□□□□□ -0.41
CCDC7-203ENST00000362006 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.49□□□□□ -0.41
CCDC7-203ENST00000362006 IGKV2-29A2NJV5 120 aaPredicted RBP12.49□□□□□ -0.41
CCDC7-203ENST00000362006 PAPPA-AS1Q5QFB9 102 aa12.48□□□□□ -0.41
CCDC7-203ENST00000362006 Q6ZN92 141 aa12.48□□□□□ -0.41
CCDC7-203ENST00000362006 SYS1-DBNDD2H3BUS1 97 aa12.47□□□□□ -0.41
CCDC7-203ENST00000362006 LELP1Q5T871 98 aa12.47□□□□□ -0.41
CCDC7-203ENST00000362006 LYPD5Q6UWN5 251 aa12.47□□□□□ -0.41
CCDC7-203ENST00000362006 PET117Q6UWS5 81 aa12.47□□□□□ -0.41
CCDC7-203ENST00000362006 SPATA12Q7Z6I5 190 aa12.47□□□□□ -0.41
CCDC7-203ENST00000362006 MRPL52Q86TS9 123 aaKnown RBP12.47□□□□□ -0.41
CCDC7-203ENST00000362006 CHCHD5Q9BSY4 110 aa12.47□□□□□ -0.41
CCDC7-203ENST00000362006 UBE2D4Q9Y2X8 147 aa12.47□□□□□ -0.41
CCDC7-203ENST00000362006 CSDC2Q9Y534 153 aaKnown RBP12.47□□□□□ -0.41
CCDC7-203ENST00000362006 PRSS1P07477 247 aa12.46□□□□□ -0.41
CCDC7-203ENST00000362006 PKIAP61925 76 aa12.46□□□□□ -0.41
CCDC7-203ENST00000362006 IGLL5B9A064 214 aa12.46□□□□□ -0.42
CCDC7-203ENST00000362006 FGF6P10767 208 aa12.46□□□□□ -0.42
CCDC7-203ENST00000362006 ZNF25P17030 456 aaPredicted RBP12.46□□□□□ -0.42
CCDC7-203ENST00000362006 AMMECR1LQ6DCA0 310 aa12.46□□□□□ -0.42
CCDC7-203ENST00000362006 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.42
CCDC7-203ENST00000362006 CEMP1Q6PRD7 247 aaPredicted RBP12.45□□□□□ -0.42
CCDC7-203ENST00000362006 NUPR2A6NF83 97 aa12.44□□□□□ -0.42
CCDC7-203ENST00000362006 MRPS36P82909 103 aaKnown RBP12.44□□□□□ -0.42
CCDC7-203ENST00000362006 JOSD1Q15040 202 aaPredicted RBP12.44□□□□□ -0.42
CCDC7-203ENST00000362006 TMEM101Q96IK0 257 aa12.44□□□□□ -0.42
CCDC7-203ENST00000362006 C20orf202A1L168 122 aa12.44□□□□□ -0.42
CCDC7-203ENST00000362006 TRAV12-1A0A0B4J245 112 aa12.43□□□□□ -0.42
CCDC7-203ENST00000362006 TRAV8-6A0A0B4J262 113 aa12.43□□□□□ -0.42
CCDC7-203ENST00000362006 KLK5Q9Y337 293 aaPredicted RBP12.43□□□□□ -0.42
CCDC7-203ENST00000362006 GAGE6Q13070 117 aa12.43□□□□□ -0.42
CCDC7-203ENST00000362006 OR5A1Q8NGJ0 315 aa12.43□□□□□ -0.42
CCDC7-203ENST00000362006 BAALCQ8WXS3 180 aa12.43□□□□□ -0.42
CCDC7-203ENST00000362006 IGLV4-3A0A075B6K6 122 aa12.42□□□□□ -0.42
CCDC7-203ENST00000362006 SCGB1D1O95968 90 aa12.42□□□□□ -0.42
CCDC7-203ENST00000362006 VCX2Q9H322 139 aa12.42□□□□□ -0.42
CCDC7-203ENST00000362006 A0A1B0GUV1 79 aa12.41□□□□□ -0.42
CCDC7-203ENST00000362006 H0Y8G0 127 aa12.41□□□□□ -0.42
CCDC7-203ENST00000362006 TCTAP57738 103 aa12.41□□□□□ -0.42
CCDC7-203ENST00000362006 PMVKQ15126 192 aa12.41□□□□□ -0.42
CCDC7-203ENST00000362006 ESRGQ1W209 222 aa12.41□□□□□ -0.42
CCDC7-203ENST00000362006 LGALS9CQ6DKI2 356 aa12.41□□□□□ -0.42
CCDC7-203ENST00000362006 TMEM262E9PQX1 116 aa12.41□□□□□ -0.42
CCDC7-203ENST00000362006 LINC01545Q5VT33 79 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms