RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 CXCL5P42830 114 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 UBE2D1P51668 147 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 ATP5EP2Q5VTU8 51 aa10.42□□□□□ -0.74
SMC5-201ENST00000361138 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
SMC5-201ENST00000361138 TIRAPP58753 221 aa10.41□□□□□ -0.74
SMC5-201ENST00000361138 EML5Q05BV3 1969 aa10.41□□□□□ -0.74
SMC5-201ENST00000361138 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
SMC5-201ENST00000361138 A8MZ25 164 aa10.41□□□□□ -0.74
SMC5-201ENST00000361138 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
SMC5-201ENST00000361138 NREPQ16612 68 aa10.4□□□□□ -0.74
SMC5-201ENST00000361138 C10orf105Q8TEF2 133 aa10.4□□□□□ -0.74
SMC5-201ENST00000361138 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
SMC5-201ENST00000361138 COX7CP15954 63 aa10.4□□□□□ -0.74
SMC5-201ENST00000361138 FUSP35637 526 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMC5-201ENST00000361138 IGIPA6NJ69 53 aa10.4□□□□□ -0.74
SMC5-201ENST00000361138 LINC00694P0DN24 101 aa10.4□□□□□ -0.75
SMC5-201ENST00000361138 PIK3CD-AS1Q5SR53 167 aa10.4□□□□□ -0.75
SMC5-201ENST00000361138 C20orf197Q8N268 126 aa10.4□□□□□ -0.75
SMC5-201ENST00000361138 LRRC75A-AS1Q8N1F1 130 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 PSMG3-AS1Q96PY0 264 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 RPL18AQ02543 176 aaKnown RBP10.39□□□□□ -0.75
SMC5-201ENST00000361138 BRK1Q8WUW1 75 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 PKDREJQ9NTG1 2253 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 CRIP2P52943 208 aaPredicted RBP10.39□□□□□ -0.75
SMC5-201ENST00000361138 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 C4orf3Q8WVX3 66 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 GTF3C1Q12789 2109 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 SLPIP03973 132 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 PDE6GP18545 87 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 Q8N6K4 173 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 SERP2Q8N6R1 65 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 MAP6D1Q9H9H5 199 aa10.39□□□□□ -0.75
SMC5-201ENST00000361138 FAM240AA0A1B0GVK7 77 aa10.38□□□□□ -0.75
SMC5-201ENST00000361138 FBXL19-AS1Q494R0 122 aa10.38□□□□□ -0.75
SMC5-201ENST00000361138 CLPSL1A2RUU4 121 aa10.38□□□□□ -0.75
SMC5-201ENST00000361138 K7EQG2 157 aa10.38□□□□□ -0.75
SMC5-201ENST00000361138 COX8CQ7Z4L0 72 aa10.38□□□□□ -0.75
SMC5-201ENST00000361138 PROK1P58294 105 aa10.38□□□□□ -0.75
SMC5-201ENST00000361138 DIRC1Q969H9 104 aa10.37□□□□□ -0.75
SMC5-201ENST00000361138 CADP27708 2225 aa10.37□□□□□ -0.75
SMC5-201ENST00000361138 IGHV4-28A0A0C4DH34 117 aa10.37□□□□□ -0.75
SMC5-201ENST00000361138 Q8NA96 180 aa10.37□□□□□ -0.75
SMC5-201ENST00000361138 IGLV2-18A0A075B6J9 118 aa10.36□□□□□ -0.75
SMC5-201ENST00000361138 CACNA1BQ00975 2339 aa10.36□□□□□ -0.75
SMC5-201ENST00000361138 UBE2D4Q9Y2X8 147 aa10.36□□□□□ -0.75
SMC5-201ENST00000361138 APC2O95996 2303 aa10.36□□□□□ -0.75
SMC5-201ENST00000361138 PSCAO43653 123 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 CAMK2N2Q96S95 79 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 ACACAQ13085 2346 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 CEP192Q8TEP8 1941 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 CDIP1Q9H305 208 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 KLLNB2CW77 178 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 C9orf85Q96MD7 179 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 GVINP1Q7Z2Y8 2422 aa10.35□□□□□ -0.75
SMC5-201ENST00000361138 ROS1P08922 2347 aa10.34□□□□□ -0.75
SMC5-201ENST00000361138 FAM222AQ5U5X8 452 aa10.34□□□□□ -0.75
SMC5-201ENST00000361138 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
SMC5-201ENST00000361138 WFDC9Q8NEX5 89 aa10.34□□□□□ -0.75
SMC5-201ENST00000361138 LMO4P61968 165 aa10.34□□□□□ -0.75
SMC5-201ENST00000361138 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
SMC5-201ENST00000361138 TNFRSF13BO14836 293 aaPredicted RBP10.34□□□□□ -0.75
SMC5-201ENST00000361138 UBE2DNLQ8IWF7 75 aa10.33□□□□□ -0.76
SMC5-201ENST00000361138 LINC01546A6NGU7 62 aa10.33□□□□□ -0.76
SMC5-201ENST00000361138 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
SMC5-201ENST00000361138 M0QXV9 152 aa10.33□□□□□ -0.76
SMC5-201ENST00000361138 SVIPQ8NHG7 77 aa10.33□□□□□ -0.76
SMC5-201ENST00000361138 FAM110AQ9BQ89 295 aa10.33□□□□□ -0.76
SMC5-201ENST00000361138 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
SMC5-201ENST00000361138 ZNF318Q5VUA4 2279 aa10.32□□□□□ -0.76
SMC5-201ENST00000361138 CRYGDP07320 174 aa10.32□□□□□ -0.76
SMC5-201ENST00000361138 Q6ZTI0 123 aa10.32□□□□□ -0.76
SMC5-201ENST00000361138 ZFHX2Q9C0A1 2572 aaPredicted RBP10.32□□□□□ -0.76
SMC5-201ENST00000361138 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
SMC5-201ENST00000361138 EXPH5Q8NEV8 1989 aa10.31□□□□□ -0.76
SMC5-201ENST00000361138 IGKV2D-24A0A075B6R9 120 aa10.31□□□□□ -0.76
SMC5-201ENST00000361138 NDUFC2-KCTD14E9PQ53 114 aa10.31□□□□□ -0.76
SMC5-201ENST00000361138 COX7BP24311 80 aa10.31□□□□□ -0.76
SMC5-201ENST00000361138 ETDCA0A1B0GVM5 59 aa10.31□□□□□ -0.76
SMC5-201ENST00000361138 POM121L12Q8N7R1 296 aa10.31□□□□□ -0.76
SMC5-201ENST00000361138 POLEQ07864 2286 aa10.31□□□□□ -0.76
SMC5-201ENST00000361138 Q6JHZ5 121 aa10.3□□□□□ -0.76
SMC5-201ENST00000361138 MP68P56378 58 aa10.3□□□□□ -0.76
SMC5-201ENST00000361138 COL6A6A6NMZ7 2263 aa10.3□□□□□ -0.76
SMC5-201ENST00000361138 UBE2BP63146 152 aa10.29□□□□□ -0.76
SMC5-201ENST00000361138 PRB2P02812 416 aaPredicted RBP10.29□□□□□ -0.76
SMC5-201ENST00000361138 LINC00526Q96FQ7 95 aa10.29□□□□□ -0.76
SMC5-201ENST00000361138 MPLKIPQ8TAP9 179 aa10.29□□□□□ -0.76
SMC5-201ENST00000361138 SMIM11BQ8TCY0 68 aa10.29□□□□□ -0.76
SMC5-201ENST00000361138 RMI2Q96E14 147 aa10.28□□□□□ -0.76
SMC5-201ENST00000361138 C11orf71Q6IPW1 123 aa10.28□□□□□ -0.76
SMC5-201ENST00000361138 F8W735 103 aaPredicted RBP10.27□□□□□ -0.76
SMC5-201ENST00000361138 PRORYQ9H606 182 aa10.27□□□□□ -0.76
SMC5-201ENST00000361138 TANC2Q9HCD6 1990 aa10.27□□□□□ -0.77
SMC5-201ENST00000361138 Q6ZSV7 163 aa10.27□□□□□ -0.77
SMC5-201ENST00000361138 ESM1Q9NQ30 184 aa10.27□□□□□ -0.77
SMC5-201ENST00000361138 MUC6Q6W4X9 2439 aa10.26□□□□□ -0.77
SMC5-201ENST00000361138 CACNA1HO95180 2353 aa10.26□□□□□ -0.77
SMC5-201ENST00000361138 ATP5EP56381 51 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms