RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SPATA25Q9BR10 227 aa16.31■□□□□ 0.2
SDF4-202ENST00000360001 PRADC1Q9BSG0 188 aa16.31■□□□□ 0.2
SDF4-202ENST00000360001 CRYBA4P53673 196 aa16.3■□□□□ 0.2
SDF4-202ENST00000360001 CYSLTR1Q9Y271 337 aa16.3■□□□□ 0.2
SDF4-202ENST00000360001 ATP5G1P05496 136 aa16.29■□□□□ 0.2
SDF4-202ENST00000360001 G0S2P27469 103 aa16.29■□□□□ 0.2
SDF4-202ENST00000360001 PRO0255Q9UI72 69 aa16.29■□□□□ 0.2
SDF4-202ENST00000360001 ATP5LO75964 103 aa16.29■□□□□ 0.2
SDF4-202ENST00000360001 RPL39P62891 51 aaKnown RBP16.29■□□□□ 0.2
SDF4-202ENST00000360001 PET117Q6UWS5 81 aa16.29■□□□□ 0.2
SDF4-202ENST00000360001 HUWE1Q7Z6Z7 4374 aaKnown RBP16.29■□□□□ 0.2
SDF4-202ENST00000360001 H0Y8G0 127 aa16.28■□□□□ 0.2
SDF4-202ENST00000360001 DAZ4Q86SG3 579 aaKnown RBP16.28■□□□□ 0.2
SDF4-202ENST00000360001 SCGB3A1Q96QR1 104 aa16.28■□□□□ 0.2
SDF4-202ENST00000360001 DAZ3Q9NR90 486 aaKnown RBP16.28■□□□□ 0.2
SDF4-202ENST00000360001 LINC00694P0DN24 101 aa16.27■□□□□ 0.2
SDF4-202ENST00000360001 COTL1Q14019 142 aa16.27■□□□□ 0.2
SDF4-202ENST00000360001 C12orf74Q32Q52 190 aa16.27■□□□□ 0.2
SDF4-202ENST00000360001 C20orf203Q8NBC4 194 aa16.27■□□□□ 0.2
SDF4-202ENST00000360001 A0A0J9YWU9 116 aa16.27■□□□□ 0.19
SDF4-202ENST00000360001 LINC01549A6NIU2 74 aa16.26■□□□□ 0.19
SDF4-202ENST00000360001 ERASQ7Z444 233 aa16.26■□□□□ 0.19
SDF4-202ENST00000360001 CHCHD7Q9BUK0 85 aa16.26■□□□□ 0.19
SDF4-202ENST00000360001 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.25■□□□□ 0.19
SDF4-202ENST00000360001 LINC01545Q5VT33 79 aa16.25■□□□□ 0.19
SDF4-202ENST00000360001 IGIPA6NJ69 53 aa16.24■□□□□ 0.19
SDF4-202ENST00000360001 TEX43Q6ZNM6 134 aa16.24■□□□□ 0.19
SDF4-202ENST00000360001 PAX4O43316 350 aa16.24■□□□□ 0.19
SDF4-202ENST00000360001 GYPEP15421 78 aa16.24■□□□□ 0.19
SDF4-202ENST00000360001 ZMAT4Q9H898 229 aa16.24■□□□□ 0.19
SDF4-202ENST00000360001 NTM-AS1Q6ZSK4 140 aa16.23■□□□□ 0.19
SDF4-202ENST00000360001 VSIG2Q96IQ7 327 aa16.23■□□□□ 0.19
SDF4-202ENST00000360001 C20orf202A1L168 122 aa16.22■□□□□ 0.19
SDF4-202ENST00000360001 F5H768 121 aa16.22■□□□□ 0.19
SDF4-202ENST00000360001 PRSS1P07477 247 aa16.22■□□□□ 0.19
SDF4-202ENST00000360001 PMCHL2Q9BQD1 86 aa16.22■□□□□ 0.19
SDF4-202ENST00000360001 HTN3P15516 51 aa16.22■□□□□ 0.19
SDF4-202ENST00000360001 DNAH9Q9NYC9 4486 aa16.21■□□□□ 0.19
SDF4-202ENST00000360001 LGALS9CQ6DKI2 356 aa16.21■□□□□ 0.19
SDF4-202ENST00000360001 TIMM17AQ99595 171 aa16.21■□□□□ 0.19
SDF4-202ENST00000360001 A0A0J9YY99 117 aa16.2■□□□□ 0.18
SDF4-202ENST00000360001 Q6ZN92 141 aa16.2■□□□□ 0.18
SDF4-202ENST00000360001 ATOH7Q8N100 152 aa16.2■□□□□ 0.18
SDF4-202ENST00000360001 GTSF1LQ9H1H1 148 aa16.2■□□□□ 0.18
SDF4-202ENST00000360001 TRAV26-1A0A087WT03 109 aa16.19■□□□□ 0.18
SDF4-202ENST00000360001 BAALCQ8WXS3 180 aa16.19■□□□□ 0.18
SDF4-202ENST00000360001 TMEM141Q96I45 108 aa16.19■□□□□ 0.18
SDF4-202ENST00000360001 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.18■□□□□ 0.18
SDF4-202ENST00000360001 IGKV2-29A2NJV5 120 aaPredicted RBP16.18■□□□□ 0.18
SDF4-202ENST00000360001 ODF1Q14990 250 aa16.18■□□□□ 0.18
SDF4-202ENST00000360001 Q6ZTC4 211 aa16.18■□□□□ 0.18
SDF4-202ENST00000360001 S100A12P80511 92 aa16.18■□□□□ 0.18
SDF4-202ENST00000360001 ATP6V0E2Q8NHE4 81 aa16.17■□□□□ 0.18
SDF4-202ENST00000360001 C11orf45Q8TAV5 145 aa16.17■□□□□ 0.18
SDF4-202ENST00000360001 PYGO1Q9Y3Y4 419 aa16.17■□□□□ 0.18
SDF4-202ENST00000360001 TRAV12-1A0A0B4J245 112 aa16.16■□□□□ 0.18
SDF4-202ENST00000360001 B9D2Q9BPU9 175 aa16.16■□□□□ 0.18
SDF4-202ENST00000360001 NANOS2P60321 138 aaKnown RBP16.15■□□□□ 0.18
SDF4-202ENST00000360001 OPRPNQ99935 248 aaPredicted RBP16.15■□□□□ 0.18
SDF4-202ENST00000360001 UBE2D4Q9Y2X8 147 aa16.15■□□□□ 0.18
SDF4-202ENST00000360001 A0A087WX48 190 aa16.15■□□□□ 0.18
SDF4-202ENST00000360001 CEMP1Q6PRD7 247 aaPredicted RBP16.14■□□□□ 0.17
SDF4-202ENST00000360001 FAM104AQ969W3 186 aa16.14■□□□□ 0.17
SDF4-202ENST00000360001 VAMP8Q9BV40 100 aa16.14■□□□□ 0.17
SDF4-202ENST00000360001 IGLV4-3A0A075B6K6 122 aa16.13■□□□□ 0.17
SDF4-202ENST00000360001 TRBV6-8A0A0A6YYG3 113 aa16.13■□□□□ 0.17
SDF4-202ENST00000360001 MAJINQ3KP22 176 aa16.13■□□□□ 0.17
SDF4-202ENST00000360001 ZNF664Q8N3J9 261 aa16.13■□□□□ 0.17
SDF4-202ENST00000360001 SPANXA1Q9NS26 97 aa16.13■□□□□ 0.17
SDF4-202ENST00000360001 TRBV25-1A0A075B6N4 114 aa16.13■□□□□ 0.17
SDF4-202ENST00000360001 PRSS29PA6NIE9 313 aa16.13■□□□□ 0.17
SDF4-202ENST00000360001 ZC2HC1BQ5TFG8 222 aa16.13■□□□□ 0.17
SDF4-202ENST00000360001 MRPL35Q9NZE8 188 aaKnown RBP16.13■□□□□ 0.17
SDF4-202ENST00000360001 A0A096LPF7 62 aa16.12■□□□□ 0.17
SDF4-202ENST00000360001 TMEM243Q9BU79 118 aa16.12■□□□□ 0.17
SDF4-202ENST00000360001 PAM16Q9Y3D7 125 aa16.12■□□□□ 0.17
SDF4-202ENST00000360001 COL7A1Q02388 2944 aa16.12■□□□□ 0.17
SDF4-202ENST00000360001 TRAV9-2A0A087WT02 112 aa16.11■□□□□ 0.17
SDF4-202ENST00000360001 TMEM97Q5BJF2 176 aa16.11■□□□□ 0.17
SDF4-202ENST00000360001 PMVKQ15126 192 aa16.11■□□□□ 0.17
SDF4-202ENST00000360001 TIMM21Q9BVV7 248 aa16.11■□□□□ 0.17
SDF4-202ENST00000360001 NPSP0C0P6 89 aa16.1■□□□□ 0.17
SDF4-202ENST00000360001 CST9LQ9H4G1 147 aa16.1■□□□□ 0.17
SDF4-202ENST00000360001 MRPL23Q16540 153 aaKnown RBP16.09■□□□□ 0.17
SDF4-202ENST00000360001 CHTOPQ9Y3Y2 248 aaKnown RBP16.09■□□□□ 0.17
SDF4-202ENST00000360001 ICOSQ9Y6W8 199 aa16.09■□□□□ 0.17
SDF4-202ENST00000360001 hDV102S1A0JD36 115 aa16.09■□□□□ 0.17
SDF4-202ENST00000360001 F8VRH5 84 aa16.09■□□□□ 0.17
SDF4-202ENST00000360001 MRPL52Q86TS9 123 aaKnown RBP16.09■□□□□ 0.17
SDF4-202ENST00000360001 FGF6P10767 208 aa16.08■□□□□ 0.16
SDF4-202ENST00000360001 H3BNG1 76 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 DPM2O94777 84 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 PAPPA-AS1Q5QFB9 102 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 MEGF8Q7Z7M0 2845 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 IGKCP01834 107 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 SPATA45Q537H7 98 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 Q6ZUT4 128 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 AMELXQ99217 191 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 PRO1933Q9H354 126 aa16.07■□□□□ 0.16
SDF4-202ENST00000360001 DEFB131BA0A096LNP1 70 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms