RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 FCER1GP30273 86 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 RPL24P83731 157 aaKnown RBP3.92□□□□□ -1.78
CD47-201ENST00000355354 UBE2E2Q96LR5 201 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 C12orf74Q32Q52 190 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 ORAOV1Q8WV07 137 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 ODF3Q96PU9 254 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 NCOR1P1Q9H4R4 102 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 ZNF702PQ9H963 129 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 RNF183Q96D59 192 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 CHAC1Q9BUX1 264 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 Q9H8V8 135 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 A0A087WVE0 104 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 A4D1N5 150 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 ATP5IP56385 69 aaPredicted RBP3.92□□□□□ -1.78
CD47-201ENST00000355354 TAS2R45P59539 299 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 VMA21Q3ZAQ7 101 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 LINC01620Q4KN68 170 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 SLC25A34Q6PIV7 304 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 LINC00311Q8N616 119 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 NEXN-AS1Q8NBZ9 246 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 ZNF479Q96JC4 524 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 HIGD1BQ9P298 99 aa3.92□□□□□ -1.78
CD47-201ENST00000355354 KLK9Q2XQG4 91 aa3.91□□□□□ -1.78
CD47-201ENST00000355354 ODF3L2Q3SX64 289 aa3.91□□□□□ -1.78
CD47-201ENST00000355354 A0A1W2PRX2 142 aa3.91□□□□□ -1.78
CD47-201ENST00000355354 FAM162BQ5T6X4 162 aa3.91□□□□□ -1.78
CD47-201ENST00000355354 CLPSL2Q6UWE3 100 aa3.91□□□□□ -1.78
CD47-201ENST00000355354 INS-IGF2F8WCM5 200 aa3.91□□□□□ -1.78
CD47-201ENST00000355354 ERHP84090 104 aaKnown RBP3.91□□□□□ -1.78
CD47-201ENST00000355354 CCDC179H3BU77 68 aa3.9□□□□□ -1.78
CD47-201ENST00000355354 SLPIP03973 132 aa3.9□□□□□ -1.78
CD47-201ENST00000355354 ATP5G1P05496 136 aa3.9□□□□□ -1.78
CD47-201ENST00000355354 RNASE4P34096 147 aaKnown RBP3.9□□□□□ -1.78
CD47-201ENST00000355354 ZNF418Q8TF45 676 aaPredicted RBP3.9□□□□□ -1.78
CD47-201ENST00000355354 LOC107984640A0A0U1RRK4 108 aa3.9□□□□□ -1.78
CD47-201ENST00000355354 KCNIP4Q6PIL6 250 aa3.9□□□□□ -1.78
CD47-201ENST00000355354 C2orf66Q6UXQ4 117 aa3.9□□□□□ -1.78
CD47-201ENST00000355354 Q6ZTI0 123 aa3.9□□□□□ -1.78
CD47-201ENST00000355354 HIGD1AQ9Y241 93 aa3.9□□□□□ -1.78
CD47-201ENST00000355354 M0QY20 66 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 OR11H2Q8NH07 326 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 DLX4Q92988 240 aaPredicted RBP3.9□□□□□ -1.79
CD47-201ENST00000355354 LINC00467Q9BRT7 94 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 PPBPP02775 128 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 CSN1S1P47710 185 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 SUMO4Q6EEV6 95 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 Q6ZUT4 128 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 C1orf158Q8N1D5 194 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 OR4C5Q8NGB2 326 aa3.9□□□□□ -1.79
CD47-201ENST00000355354 IGKV2-28A0A075B6P5 120 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 IGKV2D-28P01615 120 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 NANOS2P60321 138 aaKnown RBP3.89□□□□□ -1.79
CD47-201ENST00000355354 C2orf82Q6UX34 121 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 SMIM15Q7Z3B0 74 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 SPXQ9BT56 116 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 RHPN1-AS1Q9BWJ2 59 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 MRPL16Q9NX20 251 aaKnown RBP3.89□□□□□ -1.79
CD47-201ENST00000355354 HIST1H1AQ02539 215 aaPredicted RBP3.89□□□□□ -1.79
CD47-201ENST00000355354 CFAP126Q5VTH2 177 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 SYT8Q8NBV8 401 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 Q9HAA7 133 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 K7EIL1 84 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 RPL11P62913 178 aaKnown RBP3.89□□□□□ -1.79
CD47-201ENST00000355354 C10orf25Q5T742 122 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 BPIFA4PQ86YQ2 179 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 C19orf73Q9NVV2 129 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 WDR73Q6P4I2 378 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 ORMDL3Q8N138 153 aa3.89□□□□□ -1.79
CD47-201ENST00000355354 C9orf118A6NHY6 69 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 ITGB1BP1O14713 200 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 VPS25Q9BRG1 176 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 PGPEP1Q9NXJ5 209 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 TP53TG1Q9Y2A0 90 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 TMEM167BQ9NRX6 74 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 XCL2Q9UBD3 114 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 SPCS1Q9Y6A9 102 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 TRAV30A0A087WSZ9 112 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 COX8CQ7Z4L0 72 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 LY96Q9Y6Y9 160 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 TRIAP1O43715 76 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 CRYBA4P53673 196 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 C11orf72Q8NBR9 251 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 PPP1R14DQ9NXH3 145 aa3.88□□□□□ -1.79
CD47-201ENST00000355354 A6NDX4 124 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 CASC10Q5T4H9 136 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 LINC00242Q5T6M2 205 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 LINC00337Q8N6G1 96 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 KLLNB2CW77 178 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 IGHV3-30P01768 117 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 IGHV3-30-5P0DP03 117 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 PSMB8P28062 276 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 SUMO2P61956 95 aaKnown RBP3.87□□□□□ -1.79
CD47-201ENST00000355354 OR5A1Q8NGJ0 315 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 TMEM191AQ9H0A3 160 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 IGLV4-3A0A075B6K6 122 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 SDHAF1A6NFY7 115 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 PF4V1P10720 104 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 PSMG4Q5JS54 123 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 FOXI2Q6ZQN5 318 aa3.87□□□□□ -1.79
CD47-201ENST00000355354 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms