RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 NEXN-AS1Q8NBZ9 246 aa3.79□□□□□ -1.8
CKAP5-202ENST00000354558 TYMSOSQ8TAI1 123 aa3.79□□□□□ -1.8
CKAP5-202ENST00000354558 LINC00467Q9BRT7 94 aa3.79□□□□□ -1.8
CKAP5-202ENST00000354558 GTF3C1Q12789 2109 aa3.79□□□□□ -1.8
CKAP5-202ENST00000354558 DOCK8Q8NF50 2099 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 IGLV1-47P01700 117 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 DOCK9Q9BZ29 2069 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 C3orf79P0CE67 100 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 ZGRF1Q86YA3 2104 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 ZNF295-AS1Q8N0V1 137 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 CDIP1Q9H305 208 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 COL4A3Q01955 1670 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 CDSNQ15517 529 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 DKK2Q9UBU2 259 aa3.78□□□□□ -1.8
CKAP5-202ENST00000354558 SRSF3P84103 164 aaKnown RBP3.77□□□□□ -1.81
CKAP5-202ENST00000354558 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 C20orf173Q96LM9 149 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 EP400Q96L91 3159 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 GDF5OSQ5U4N7 250 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 SPANXB1Q9NS25 103 aaPredicted RBP3.77□□□□□ -1.81
CKAP5-202ENST00000354558 HELZP42694 1942 aaKnown RBP3.77□□□□□ -1.81
CKAP5-202ENST00000354558 MT-ATP8P03928 68 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 CFC1BP0CG36 223 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 CFC1P0CG37 223 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 CD164L2Q6UWJ8 174 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 ATP11AUNQ6ZP68 121 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 SCXQ7RTU7 201 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 CACNA1EQ15878 2313 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 Q6ZS46 218 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 C2orf16Q68DN1 1984 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 RBX1P62877 108 aa3.77□□□□□ -1.81
CKAP5-202ENST00000354558 COX6A2Q02221 97 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 SBSPONQ8IVN8 264 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 V9GYV3 84 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 M0R2T5 61 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 LRRK1Q38SD2 2015 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 FAM30AQ9NZY2 134 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 LGALS9CQ6DKI2 356 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 TOMM6Q96B49 74 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 SPANXDQ9BXN6 97 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 PTPRDP23468 1912 aa3.76□□□□□ -1.81
CKAP5-202ENST00000354558 K7ERJ3 54 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 AVPP01185 164 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 PDE6GP18545 87 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 Q8N9L7 120 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 CEP290O15078 2479 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 PIK3CD-AS1Q5SR53 167 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 LINC01545Q5VT33 79 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 USF3Q68DE3 2245 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 E7EUB6 86 aa3.75□□□□□ -1.81
CKAP5-202ENST00000354558 CARHSP1Q9Y2V2 147 aaKnown RBP3.75□□□□□ -1.81
CKAP5-202ENST00000354558 A0A0J9YXY3 114 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 A0A1B0GXF2 115 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 EPM2AB3EWF7 344 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 IGLV1-51P01701 117 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 MRPL52Q86TS9 123 aaKnown RBP3.74□□□□□ -1.81
CKAP5-202ENST00000354558 MSMPQ1L6U9 139 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 Q9BRP9 147 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 EP300Q09472 2414 aaPredicted RBP3.74□□□□□ -1.81
CKAP5-202ENST00000354558 A0A0B4J2C4 111 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 CXCL1P09341 107 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 FHL2Q14192 279 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 MPLKIPQ8TAP9 179 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 C18orf32Q8TCD1 76 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 CLEC2BQ92478 149 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 CCKP06307 115 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 KIF26BQ2KJY2 2108 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 PYGO1Q9Y3Y4 419 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 LINC00959A0A1B0GUT2 108 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 LOC105371267A0A1B0GV96 52 aa3.74□□□□□ -1.81
CKAP5-202ENST00000354558 SMR3BP02814 79 aaPredicted RBP3.73□□□□□ -1.81
CKAP5-202ENST00000354558 C22orf34Q6ZV56 151 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 FAM19A3Q7Z5A8 133 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 A0A0U1RQV1 116 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 PRM2P04554 102 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 RSPO1Q2MKA7 263 aaPredicted RBP3.73□□□□□ -1.81
CKAP5-202ENST00000354558 Q6ZSN1 163 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 PPDPFLQ8WWR9 84 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 DYSFO75923 2080 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 ANAPC1Q9H1A4 1944 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 MRPL55Q7Z7F7 128 aaKnown RBP3.73□□□□□ -1.81
CKAP5-202ENST00000354558 ZNF524Q96C55 264 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 C11orf86A6NJI1 115 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 C20orf203Q8NBC4 194 aa3.73□□□□□ -1.81
CKAP5-202ENST00000354558 NBDYA0A0U1RRE5 68 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 CHTF8P0CG12 524 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 Q6ZRP5 223 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 PHF3Q92576 2039 aaKnown RBP3.72□□□□□ -1.81
CKAP5-202ENST00000354558 TRBV30A0A0K0K1B3 111 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 TIMM17BO60830 172 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 P0C879 139 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 C7orf65Q6ZTY9 151 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 LINC00336Q6ZUF6 198 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 IGKV2D-30A0A075B6S6 120 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 IGKV2-30P06310 120 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 KRTAP27-1Q3LI81 207 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 CADP27708 2225 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 LYPD5Q6UWN5 251 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 RNF185Q96GF1 192 aa3.72□□□□□ -1.81
CKAP5-202ENST00000354558 FREM3P0C091 2139 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms