RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
SMC6-201ENST00000351948 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
SMC6-201ENST00000351948 IGLV2-11P01706 119 aa10.2□□□□□ -0.78
SMC6-201ENST00000351948 CAMK2N2Q96S95 79 aa10.2□□□□□ -0.78
SMC6-201ENST00000351948 TRAV4A0A0B4J268 109 aa10.19□□□□□ -0.78
SMC6-201ENST00000351948 SLC25A29Q8N8R3 303 aa10.19□□□□□ -0.78
SMC6-201ENST00000351948 RPL18AQ02543 176 aaKnown RBP10.19□□□□□ -0.78
SMC6-201ENST00000351948 C11orf21Q9P2W6 132 aa10.19□□□□□ -0.78
SMC6-201ENST00000351948 COA6Q5JTJ3 125 aaKnown RBP10.19□□□□□ -0.78
SMC6-201ENST00000351948 BAALCQ8WXS3 180 aa10.19□□□□□ -0.78
SMC6-201ENST00000351948 ZNF292O60281 2723 aa10.19□□□□□ -0.78
SMC6-201ENST00000351948 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
SMC6-201ENST00000351948 COX7A2LO14548 114 aa10.19□□□□□ -0.78
SMC6-201ENST00000351948 GHRHP01286 108 aa10.18□□□□□ -0.78
SMC6-201ENST00000351948 SCRT2Q9NQ03 307 aa10.18□□□□□ -0.78
SMC6-201ENST00000351948 Q6ZVH6 145 aa10.18□□□□□ -0.78
SMC6-201ENST00000351948 DCANP1Q8TF63 244 aa10.18□□□□□ -0.78
SMC6-201ENST00000351948 C10orf126Q8N4M7 172 aa10.17□□□□□ -0.78
SMC6-201ENST00000351948 BVES-AS1Q5T3Y7 98 aa10.17□□□□□ -0.78
SMC6-201ENST00000351948 IGHV4-4A0A075B6R2 117 aa10.17□□□□□ -0.78
SMC6-201ENST00000351948 Q6ZUT4 128 aa10.17□□□□□ -0.78
SMC6-201ENST00000351948 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
SMC6-201ENST00000351948 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
SMC6-201ENST00000351948 CCL25O15444 150 aa10.16□□□□□ -0.78
SMC6-201ENST00000351948 UBE2BP63146 152 aa10.16□□□□□ -0.78
SMC6-201ENST00000351948 DEFB131BA0A096LNP1 70 aa10.16□□□□□ -0.78
SMC6-201ENST00000351948 TNRC6BQ9UPQ9 1833 aaKnown RBP10.15□□□□□ -0.78
SMC6-201ENST00000351948 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
SMC6-201ENST00000351948 ODF3Q96PU9 254 aa10.15□□□□□ -0.78
SMC6-201ENST00000351948 LINC01545Q5VT33 79 aa10.15□□□□□ -0.78
SMC6-201ENST00000351948 SH2D6Q7Z4S9 175 aa10.15□□□□□ -0.78
SMC6-201ENST00000351948 CEND1Q8N111 149 aa10.15□□□□□ -0.78
SMC6-201ENST00000351948 F8WEM9 126 aa10.14□□□□□ -0.79
SMC6-201ENST00000351948 USP24Q9UPU5 2620 aa10.14□□□□□ -0.79
SMC6-201ENST00000351948 TRAV8-4A0A0B4J246 113 aa10.14□□□□□ -0.79
SMC6-201ENST00000351948 PRO1854Q9UHT4 67 aa10.14□□□□□ -0.79
SMC6-201ENST00000351948 COX11Q9Y6N1 276 aa10.14□□□□□ -0.79
SMC6-201ENST00000351948 IGHV4-28A0A0C4DH34 117 aa10.14□□□□□ -0.79
SMC6-201ENST00000351948 DLEU1O43261 78 aa10.14□□□□□ -0.79
SMC6-201ENST00000351948 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
SMC6-201ENST00000351948 LINC00269Q8N2A0 174 aa10.13□□□□□ -0.79
SMC6-201ENST00000351948 ODF3L2Q3SX64 289 aa10.13□□□□□ -0.79
SMC6-201ENST00000351948 CFAP46Q8IYW2 2715 aa10.13□□□□□ -0.79
SMC6-201ENST00000351948 Q8N976 141 aa10.13□□□□□ -0.79
SMC6-201ENST00000351948 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
SMC6-201ENST00000351948 TRBV10-1A0A0K0K1A3 114 aa10.13□□□□□ -0.79
SMC6-201ENST00000351948 LINC00467Q9BRT7 94 aa10.13□□□□□ -0.79
SMC6-201ENST00000351948 RNASE3P12724 160 aaKnown RBP10.12□□□□□ -0.79
SMC6-201ENST00000351948 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
SMC6-201ENST00000351948 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
SMC6-201ENST00000351948 COX7B2Q8TF08 81 aa10.12□□□□□ -0.79
SMC6-201ENST00000351948 KLK5Q9Y337 293 aaPredicted RBP10.12□□□□□ -0.79
SMC6-201ENST00000351948 LOC100131303A0A0U1RQF7 123 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 VPS13AQ96RL7 3174 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 MGAM2Q2M2H8 2515 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 ODF1Q14990 250 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 TIMM17AQ99595 171 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 DSPP15924 2871 aaKnown RBP10.11□□□□□ -0.79
SMC6-201ENST00000351948 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 GAGE2AQ6NT46 116 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 SPAG11BQ08648 103 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 SPATA25Q9BR10 227 aa10.11□□□□□ -0.79
SMC6-201ENST00000351948 TET2Q6N021 2002 aaPredicted RBP10.1□□□□□ -0.79
SMC6-201ENST00000351948 IGHV4-30-4P0DP06 118 aa10.1□□□□□ -0.79
SMC6-201ENST00000351948 UBE2V1Q13404 147 aa10.1□□□□□ -0.79
SMC6-201ENST00000351948 BPTFQ12830 3046 aa10.1□□□□□ -0.79
SMC6-201ENST00000351948 TMEM126AQ9H061 195 aa10.1□□□□□ -0.79
SMC6-201ENST00000351948 RETNQ9HD89 108 aa10.1□□□□□ -0.79
SMC6-201ENST00000351948 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
SMC6-201ENST00000351948 SMIM9A6NGZ8 99 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 NDUFA7O95182 113 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 MRGPRG-AS1Q2M3A8 158 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 C12orf74Q32Q52 190 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 H3BMG7 143 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 MUSTN1Q8IVN3 82 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 M0QY20 66 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 GAGE12HA6NDE8 117 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 KLLNB2CW77 178 aa10.09□□□□□ -0.79
SMC6-201ENST00000351948 C9orf118A6NHY6 69 aa10.08□□□□□ -0.8
SMC6-201ENST00000351948 MIFP14174 115 aa10.08□□□□□ -0.8
SMC6-201ENST00000351948 ETDBQ3ZM63 59 aa10.08□□□□□ -0.8
SMC6-201ENST00000351948 OCIAD2Q56VL3 154 aa10.08□□□□□ -0.8
SMC6-201ENST00000351948 SND1-IT1Q9HBX3 110 aa10.08□□□□□ -0.8
SMC6-201ENST00000351948 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
SMC6-201ENST00000351948 HIST1H4AP62805 103 aaKnown RBP10.08□□□□□ -0.8
SMC6-201ENST00000351948 RNF185Q96GF1 192 aa10.08□□□□□ -0.8
SMC6-201ENST00000351948 A4D1N5 150 aa10.07□□□□□ -0.8
SMC6-201ENST00000351948 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
SMC6-201ENST00000351948 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
SMC6-201ENST00000351948 TAL2Q16559 108 aa10.07□□□□□ -0.8
SMC6-201ENST00000351948 GTSF1LQ9H1H1 148 aa10.07□□□□□ -0.8
SMC6-201ENST00000351948 VCANP13611 3396 aa10.07□□□□□ -0.8
SMC6-201ENST00000351948 REG3AQ06141 175 aa10.06□□□□□ -0.8
SMC6-201ENST00000351948 IGLV2-18A0A075B6J9 118 aa10.06□□□□□ -0.8
SMC6-201ENST00000351948 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
SMC6-201ENST00000351948 IGKV2-24A0A0C4DH68 120 aa10.06□□□□□ -0.8
SMC6-201ENST00000351948 NDUFA1O15239 70 aa10.06□□□□□ -0.8
SMC6-201ENST00000351948 HERV-K104P63124 156 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms