RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 WFDC10AQ9H1F0 79 aa16.46■□□□□ 0.23
CNTFR-201ENST00000351266 SPANXA1Q9NS26 97 aa16.46■□□□□ 0.23
CNTFR-201ENST00000351266 CUBNO60494 3623 aa16.45■□□□□ 0.22
CNTFR-201ENST00000351266 GCN1Q92616 2671 aaKnown RBP16.45■□□□□ 0.22
CNTFR-201ENST00000351266 TRBV10-1A0A0K0K1A3 114 aa16.45■□□□□ 0.22
CNTFR-201ENST00000351266 CIDEAO60543 219 aa16.45■□□□□ 0.22
CNTFR-201ENST00000351266 TMEM170BQ5T4T1 132 aa16.45■□□□□ 0.22
CNTFR-201ENST00000351266 MTORP42345 2549 aa16.45■□□□□ 0.22
CNTFR-201ENST00000351266 EMP1P54849 157 aa16.44■□□□□ 0.22
CNTFR-201ENST00000351266 ZNRF2Q8NHG8 242 aa16.44■□□□□ 0.22
CNTFR-201ENST00000351266 WNK1Q9H4A3 2382 aa16.44■□□□□ 0.22
CNTFR-201ENST00000351266 RRN3P1Q2M238 152 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 CSNK1G2-AS1Q8NCQ2 148 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 OPRPNQ99935 248 aaPredicted RBP16.43■□□□□ 0.22
CNTFR-201ENST00000351266 CHCHD7Q9BUK0 85 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 NACAE9PAV3 2078 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 C9orf118A6NHY6 69 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 ZNF815PA8K554 130 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 SMIM13P0DJ93 91 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 Q6ZTI0 123 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 AMELXQ99217 191 aa16.43■□□□□ 0.22
CNTFR-201ENST00000351266 HIST1H4GQ99525 98 aa16.42■□□□□ 0.22
CNTFR-201ENST00000351266 NOP10Q9NPE3 64 aaKnown RBP16.42■□□□□ 0.22
CNTFR-201ENST00000351266 TRBV7-3A0A075B6L6 115 aa16.41■□□□□ 0.22
CNTFR-201ENST00000351266 K7EQD1 137 aa16.41■□□□□ 0.22
CNTFR-201ENST00000351266 RPL36AP83881 106 aaKnown RBP16.41■□□□□ 0.22
CNTFR-201ENST00000351266 RPL36ALQ969Q0 106 aaKnown RBP16.41■□□□□ 0.22
CNTFR-201ENST00000351266 ZNF479Q96JC4 524 aa16.41■□□□□ 0.22
CNTFR-201ENST00000351266 Q9UF83 564 aa16.41■□□□□ 0.22
CNTFR-201ENST00000351266 CRLF1O75462 422 aa16.41■□□□□ 0.22
CNTFR-201ENST00000351266 FXYD2P54710 66 aa16.41■□□□□ 0.22
CNTFR-201ENST00000351266 C9orf66Q5T8R8 295 aa16.41■□□□□ 0.22
CNTFR-201ENST00000351266 OVOL2Q9BRP0 275 aa16.41■□□□□ 0.22
CNTFR-201ENST00000351266 CCL25O15444 150 aa16.39■□□□□ 0.21
CNTFR-201ENST00000351266 SCGB1D4Q6XE38 83 aa16.39■□□□□ 0.21
CNTFR-201ENST00000351266 UBE2D4Q9Y2X8 147 aa16.39■□□□□ 0.21
CNTFR-201ENST00000351266 PHLDA1Q8WV24 401 aaPredicted RBP16.39■□□□□ 0.21
CNTFR-201ENST00000351266 PLAC8L1A1L4L8 177 aa16.38■□□□□ 0.21
CNTFR-201ENST00000351266 DAZ4Q86SG3 579 aaKnown RBP16.38■□□□□ 0.21
CNTFR-201ENST00000351266 DAZ3Q9NR90 486 aaKnown RBP16.38■□□□□ 0.21
CNTFR-201ENST00000351266 TMEM223A0PJW6 202 aa16.37■□□□□ 0.21
CNTFR-201ENST00000351266 AMMECR1LQ6DCA0 310 aa16.37■□□□□ 0.21
CNTFR-201ENST00000351266 TIMM21Q9BVV7 248 aa16.37■□□□□ 0.21
CNTFR-201ENST00000351266 HECTD1Q9ULT8 2610 aa16.36■□□□□ 0.21
CNTFR-201ENST00000351266 IGHV3-38A0A0C4DH36 116 aa16.36■□□□□ 0.21
CNTFR-201ENST00000351266 LEPROTO15243 131 aa16.36■□□□□ 0.21
CNTFR-201ENST00000351266 ZNF22P17026 224 aaPredicted RBP16.36■□□□□ 0.21
CNTFR-201ENST00000351266 MRPS36P82909 103 aaKnown RBP16.36■□□□□ 0.21
CNTFR-201ENST00000351266 TRGV2A0A075B6R0 118 aa16.35■□□□□ 0.21
CNTFR-201ENST00000351266 A0A0J9YXV3 536 aa16.35■□□□□ 0.21
CNTFR-201ENST00000351266 LGALS3P17931 250 aaKnown RBP16.35■□□□□ 0.21
CNTFR-201ENST00000351266 J3QQQ9 107 aa16.35■□□□□ 0.21
CNTFR-201ENST00000351266 SMAGPQ0VAQ4 97 aa16.35■□□□□ 0.21
CNTFR-201ENST00000351266 FAM104AQ969W3 186 aa16.35■□□□□ 0.21
CNTFR-201ENST00000351266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.34■□□□□ 0.21
CNTFR-201ENST00000351266 IGKV2-29A2NJV5 120 aaPredicted RBP16.34■□□□□ 0.21
CNTFR-201ENST00000351266 SLC25A29Q8N8R3 303 aa16.34■□□□□ 0.21
CNTFR-201ENST00000351266 RAB37Q96AX2 223 aa16.34■□□□□ 0.21
CNTFR-201ENST00000351266 PLEKHB2Q96CS7 222 aa16.34■□□□□ 0.21
CNTFR-201ENST00000351266 H3BUT2 72 aa16.33■□□□□ 0.21
CNTFR-201ENST00000351266 NHP2Q9NX24 153 aaKnown RBP16.33■□□□□ 0.21
CNTFR-201ENST00000351266 GAGE12BA1L429 117 aa16.33■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE7O76087 117 aa16.33■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE12FP0CL80 117 aa16.33■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE12GP0CL81 117 aa16.33■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE12IP0CL82 117 aa16.33■□□□□ 0.2
CNTFR-201ENST00000351266 UBE2D3P61077 147 aa16.33■□□□□ 0.2
CNTFR-201ENST00000351266 UBE2D2P62837 147 aa16.33■□□□□ 0.2
CNTFR-201ENST00000351266 GTF2H5Q6ZYL4 71 aa16.33■□□□□ 0.2
CNTFR-201ENST00000351266 TINCRA0A1B0GVN0 87 aa16.32■□□□□ 0.2
CNTFR-201ENST00000351266 TRBV6-4A0A1B0GX49 114 aa16.32■□□□□ 0.2
CNTFR-201ENST00000351266 CEMP1Q6PRD7 247 aaPredicted RBP16.32■□□□□ 0.2
CNTFR-201ENST00000351266 TMEM238LA0A1B0GVL6 79 aa16.31■□□□□ 0.2
CNTFR-201ENST00000351266 A6NJY4 79 aa16.31■□□□□ 0.2
CNTFR-201ENST00000351266 K7EP13 123 aa16.31■□□□□ 0.2
CNTFR-201ENST00000351266 DGAT2L7PQ6IED9 249 aa16.31■□□□□ 0.2
CNTFR-201ENST00000351266 CITED1Q99966 193 aa16.31■□□□□ 0.2
CNTFR-201ENST00000351266 SRSF9Q13242 221 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE10A6NGK3 116 aa16.3■□□□□ 0.2
CNTFR-201ENST00000351266 SPANXB1Q9NS25 103 aaPredicted RBP16.3■□□□□ 0.2
CNTFR-201ENST00000351266 A0A0J9YY99 117 aa16.29■□□□□ 0.2
CNTFR-201ENST00000351266 TSPEAR-AS2P59090 65 aa16.29■□□□□ 0.2
CNTFR-201ENST00000351266 SETD2Q9BYW2 2564 aaPredicted RBP16.29■□□□□ 0.2
CNTFR-201ENST00000351266 OTOGQ6ZRI0 2925 aa16.29■□□□□ 0.2
CNTFR-201ENST00000351266 A0A1W2PPM0 123 aa16.29■□□□□ 0.2
CNTFR-201ENST00000351266 SMIM9A6NGZ8 99 aa16.29■□□□□ 0.2
CNTFR-201ENST00000351266 Q6ZUT4 128 aa16.29■□□□□ 0.2
CNTFR-201ENST00000351266 GTSF1LQ9H1H1 148 aa16.29■□□□□ 0.2
CNTFR-201ENST00000351266 CSDC2Q9Y534 153 aaKnown RBP16.29■□□□□ 0.2
CNTFR-201ENST00000351266 SETXQ7Z333 2677 aaKnown RBP16.28■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE12JA6NER3 117 aa16.28■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE4Q13068 117 aa16.28■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE5Q13069 117 aa16.28■□□□□ 0.2
CNTFR-201ENST00000351266 C12orf74Q32Q52 190 aa16.28■□□□□ 0.2
CNTFR-201ENST00000351266 GAGE13Q4V321 117 aa16.28■□□□□ 0.2
CNTFR-201ENST00000351266 SAMD5Q5TGI4 173 aa16.28■□□□□ 0.2
CNTFR-201ENST00000351266 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.28■□□□□ 0.2
CNTFR-201ENST00000351266 TRGV4A0A0C4DH28 118 aa16.27■□□□□ 0.2
CNTFR-201ENST00000351266 A0A1B0GWB2 263 aa16.27■□□□□ 0.2
CNTFR-201ENST00000351266 FABP2P12104 132 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms