RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
SAMM50-201ENST00000350028 TRGV1A0A0A0MS02 117 aa12.04□□□□□ -0.48
SAMM50-201ENST00000350028 PRADC1Q9BSG0 188 aa12.04□□□□□ -0.48
SAMM50-201ENST00000350028 RPL35AP18077 110 aaKnown RBP12.03□□□□□ -0.48
SAMM50-201ENST00000350028 CRYBA4P53673 196 aa12.03□□□□□ -0.48
SAMM50-201ENST00000350028 UBE2V1Q13404 147 aa12.03□□□□□ -0.48
SAMM50-201ENST00000350028 NFE4Q86UQ8 179 aa12.03□□□□□ -0.48
SAMM50-201ENST00000350028 WFDC10AQ9H1F0 79 aa12.03□□□□□ -0.48
SAMM50-201ENST00000350028 DAZ2Q13117 558 aaKnown RBP12.03□□□□□ -0.48
SAMM50-201ENST00000350028 VAMP3Q15836 100 aa12.03□□□□□ -0.48
SAMM50-201ENST00000350028 VCX2Q9H322 139 aa12.03□□□□□ -0.48
SAMM50-201ENST00000350028 IGLV4-3A0A075B6K6 122 aa12.02□□□□□ -0.49
SAMM50-201ENST00000350028 GCSHP23434 173 aa12.02□□□□□ -0.49
SAMM50-201ENST00000350028 C16orf74Q96GX8 76 aa12.02□□□□□ -0.49
SAMM50-201ENST00000350028 TM2D2Q9BX73 214 aa12.02□□□□□ -0.49
SAMM50-201ENST00000350028 TRAV4A0A0B4J268 109 aa12.01□□□□□ -0.49
SAMM50-201ENST00000350028 CRLF1O75462 422 aa12.01□□□□□ -0.49
SAMM50-201ENST00000350028 PTTG1IPP53801 180 aa12.01□□□□□ -0.49
SAMM50-201ENST00000350028 EMP1P54849 157 aa12.01□□□□□ -0.49
SAMM50-201ENST00000350028 OPRPNQ99935 248 aaPredicted RBP12.01□□□□□ -0.49
SAMM50-201ENST00000350028 Q9UF83 564 aa12.01□□□□□ -0.49
SAMM50-201ENST00000350028 COTL1Q14019 142 aa12□□□□□ -0.49
SAMM50-201ENST00000350028 TMEM170BQ5T4T1 132 aa12□□□□□ -0.49
SAMM50-201ENST00000350028 CEND1Q8N111 149 aa12□□□□□ -0.49
SAMM50-201ENST00000350028 CSNK1G2-AS1Q8NCQ2 148 aa12□□□□□ -0.49
SAMM50-201ENST00000350028 ZNRF2Q8NHG8 242 aa12□□□□□ -0.49
SAMM50-201ENST00000350028 CHCHD7Q9BUK0 85 aa12□□□□□ -0.49
SAMM50-201ENST00000350028 Q6ZTI0 123 aa12□□□□□ -0.49
SAMM50-201ENST00000350028 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
SAMM50-201ENST00000350028 TRBV10-1A0A0K0K1A3 114 aa11.99□□□□□ -0.49
SAMM50-201ENST00000350028 C9orf118A6NHY6 69 aa11.99□□□□□ -0.49
SAMM50-201ENST00000350028 CIDEAO60543 219 aa11.99□□□□□ -0.49
SAMM50-201ENST00000350028 SMIM13P0DJ93 91 aa11.99□□□□□ -0.49
SAMM50-201ENST00000350028 INSL3P51460 131 aa11.99□□□□□ -0.49
SAMM50-201ENST00000350028 ZNF479Q96JC4 524 aa11.99□□□□□ -0.49
SAMM50-201ENST00000350028 AMELXQ99217 191 aa11.99□□□□□ -0.49
SAMM50-201ENST00000350028 ZNF815PA8K554 130 aa11.98□□□□□ -0.49
SAMM50-201ENST00000350028 CCL25O15444 150 aa11.98□□□□□ -0.49
SAMM50-201ENST00000350028 FXYD2P54710 66 aa11.98□□□□□ -0.49
SAMM50-201ENST00000350028 RRN3P1Q2M238 152 aa11.98□□□□□ -0.49
SAMM50-201ENST00000350028 NOP10Q9NPE3 64 aaKnown RBP11.98□□□□□ -0.49
SAMM50-201ENST00000350028 SETD2Q9BYW2 2564 aaPredicted RBP11.97□□□□□ -0.49
SAMM50-201ENST00000350028 PHLDA1Q8WV24 401 aaPredicted RBP11.97□□□□□ -0.49
SAMM50-201ENST00000350028 HIST1H4GQ99525 98 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 OVOL2Q9BRP0 275 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 JMJD1CQ15652 2540 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 TRBV7-3A0A075B6L6 115 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 PLAC8L1A1L4L8 177 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 K7EQD1 137 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
SAMM50-201ENST00000350028 C9orf66Q5T8R8 295 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
SAMM50-201ENST00000350028 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
SAMM50-201ENST00000350028 FAM104AQ969W3 186 aa11.96□□□□□ -0.49
SAMM50-201ENST00000350028 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
SAMM50-201ENST00000350028 A0A0J9YXV3 536 aa11.95□□□□□ -0.5
SAMM50-201ENST00000350028 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
SAMM50-201ENST00000350028 ZNF22P17026 224 aaPredicted RBP11.95□□□□□ -0.5
SAMM50-201ENST00000350028 C2CD3Q4AC94 2353 aa11.95□□□□□ -0.5
SAMM50-201ENST00000350028 TIMM21Q9BVV7 248 aa11.94□□□□□ -0.5
SAMM50-201ENST00000350028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.94□□□□□ -0.5
SAMM50-201ENST00000350028 IGKV2-29A2NJV5 120 aaPredicted RBP11.94□□□□□ -0.5
SAMM50-201ENST00000350028 K7EP13 123 aa11.94□□□□□ -0.5
SAMM50-201ENST00000350028 LEPROTO15243 131 aa11.94□□□□□ -0.5
SAMM50-201ENST00000350028 MRPS36P82909 103 aaKnown RBP11.94□□□□□ -0.5
SAMM50-201ENST00000350028 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
SAMM50-201ENST00000350028 RAB37Q96AX2 223 aa11.94□□□□□ -0.5
SAMM50-201ENST00000350028 CEMP1Q6PRD7 247 aaPredicted RBP11.93□□□□□ -0.5
SAMM50-201ENST00000350028 DAZ4Q86SG3 579 aaKnown RBP11.93□□□□□ -0.5
SAMM50-201ENST00000350028 DAZ3Q9NR90 486 aaKnown RBP11.93□□□□□ -0.5
SAMM50-201ENST00000350028 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 GAGE12BA1L429 117 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 H3BUT2 72 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 J3QQQ9 107 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 GAGE7O76087 117 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 GAGE12FP0CL80 117 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 GAGE12GP0CL81 117 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 GAGE12IP0CL82 117 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 LGALS3P17931 250 aaKnown RBP11.92□□□□□ -0.5
SAMM50-201ENST00000350028 PLEKHB2Q96CS7 222 aa11.92□□□□□ -0.5
SAMM50-201ENST00000350028 UBE2D3P61077 147 aa11.91□□□□□ -0.5
SAMM50-201ENST00000350028 UBE2D2P62837 147 aa11.91□□□□□ -0.5
SAMM50-201ENST00000350028 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
SAMM50-201ENST00000350028 NHP2Q9NX24 153 aaKnown RBP11.91□□□□□ -0.5
SAMM50-201ENST00000350028 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
SAMM50-201ENST00000350028 TENM1Q9UKZ4 2725 aa11.9□□□□□ -0.5
SAMM50-201ENST00000350028 A0A0J9YY99 117 aa11.9□□□□□ -0.5
SAMM50-201ENST00000350028 TINCRA0A1B0GVN0 87 aa11.9□□□□□ -0.5
SAMM50-201ENST00000350028 CITED1Q99966 193 aa11.9□□□□□ -0.5
SAMM50-201ENST00000350028 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
SAMM50-201ENST00000350028 SMAGPQ0VAQ4 97 aa11.89□□□□□ -0.51
SAMM50-201ENST00000350028 C12orf74Q32Q52 190 aa11.89□□□□□ -0.51
SAMM50-201ENST00000350028 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
SAMM50-201ENST00000350028 Q6ZUT4 128 aa11.89□□□□□ -0.51
SAMM50-201ENST00000350028 GTF2H5Q6ZYL4 71 aa11.89□□□□□ -0.51
SAMM50-201ENST00000350028 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.89□□□□□ -0.51
SAMM50-201ENST00000350028 SPANXB1Q9NS25 103 aaPredicted RBP11.89□□□□□ -0.51
SAMM50-201ENST00000350028 FBN1P35555 2871 aaKnown RBP11.89□□□□□ -0.51
SAMM50-201ENST00000350028 A0A1W2PPM0 123 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms