RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 LINC01546A6NGU7 62 aa12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 BVES-AS1Q5T3Y7 98 aa12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 C2orf91Q6ZV80 131 aa12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 GIG44P09565 113 aaPredicted RBP12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 CMC4P56277 68 aaPredicted RBP12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 PMVKQ15126 192 aa12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 RHODO00212 210 aa12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 MAPKAPK5-AS1Q8N8E1 139 aa12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 RNASE8Q8TDE3 154 aaKnown RBP12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 TRRAPQ9Y4A5 3859 aa12.38□□□□□ -0.43
SMARCC2-202ENST00000347471 LOC100131303A0A0U1RQF7 123 aa12.37□□□□□ -0.43
SMARCC2-202ENST00000347471 C20orf203Q8NBC4 194 aa12.37□□□□□ -0.43
SMARCC2-202ENST00000347471 PRADC1Q9BSG0 188 aa12.37□□□□□ -0.43
SMARCC2-202ENST00000347471 C19orf73Q9NVV2 129 aa12.37□□□□□ -0.43
SMARCC2-202ENST00000347471 A8MTW9 85 aa12.37□□□□□ -0.43
SMARCC2-202ENST00000347471 BEAN1Q3B7T3 259 aa12.37□□□□□ -0.43
SMARCC2-202ENST00000347471 A0A096LPF7 62 aa12.36□□□□□ -0.43
SMARCC2-202ENST00000347471 TRBV6-5A0A0K0K1A5 114 aa12.36□□□□□ -0.43
SMARCC2-202ENST00000347471 BOD1L2Q8IYS8 172 aa12.36□□□□□ -0.43
SMARCC2-202ENST00000347471 CHAC1Q9BUX1 264 aa12.36□□□□□ -0.43
SMARCC2-202ENST00000347471 A0A0J9YXV3 536 aa12.36□□□□□ -0.43
SMARCC2-202ENST00000347471 FGF6P10767 208 aa12.36□□□□□ -0.43
SMARCC2-202ENST00000347471 HTN3P15516 51 aa12.35□□□□□ -0.43
SMARCC2-202ENST00000347471 C9orf66Q5T8R8 295 aa12.35□□□□□ -0.43
SMARCC2-202ENST00000347471 CST9LQ9H4G1 147 aa12.35□□□□□ -0.43
SMARCC2-202ENST00000347471 IGIPA6NJ69 53 aa12.35□□□□□ -0.43
SMARCC2-202ENST00000347471 ZNF815PA8K554 130 aa12.35□□□□□ -0.43
SMARCC2-202ENST00000347471 RPL36AP83881 106 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-202ENST00000347471 RPL36ALQ969Q0 106 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-202ENST00000347471 SLC25A29Q8N8R3 303 aa12.34□□□□□ -0.43
SMARCC2-202ENST00000347471 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
SMARCC2-202ENST00000347471 TRBV25-1A0A075B6N4 114 aa12.34□□□□□ -0.43
SMARCC2-202ENST00000347471 OXLD1Q5BKU9 147 aa12.34□□□□□ -0.43
SMARCC2-202ENST00000347471 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
SMARCC2-202ENST00000347471 C3orf56Q8N813 242 aa12.33□□□□□ -0.44
SMARCC2-202ENST00000347471 HERVK_113P61574 105 aa12.32□□□□□ -0.44
SMARCC2-202ENST00000347471 RHOHQ15669 191 aa12.32□□□□□ -0.44
SMARCC2-202ENST00000347471 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
SMARCC2-202ENST00000347471 TRAV12-1A0A0B4J245 112 aa12.32□□□□□ -0.44
SMARCC2-202ENST00000347471 RS1O15537 224 aa12.32□□□□□ -0.44
SMARCC2-202ENST00000347471 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMARCC2-202ENST00000347471 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
SMARCC2-202ENST00000347471 TMEM141Q96I45 108 aa12.31□□□□□ -0.44
SMARCC2-202ENST00000347471 NPSP0C0P6 89 aa12.31□□□□□ -0.44
SMARCC2-202ENST00000347471 FOSL1P15407 271 aa12.31□□□□□ -0.44
SMARCC2-202ENST00000347471 K7ERJ3 54 aa12.31□□□□□ -0.44
SMARCC2-202ENST00000347471 AMMECR1LQ6DCA0 310 aa12.31□□□□□ -0.44
SMARCC2-202ENST00000347471 ORAOV1Q8WV07 137 aa12.31□□□□□ -0.44
SMARCC2-202ENST00000347471 NHP2Q9NX24 153 aaKnown RBP12.31□□□□□ -0.44
SMARCC2-202ENST00000347471 TRAV13-1A0A0B4J241 112 aa12.3□□□□□ -0.44
SMARCC2-202ENST00000347471 K7EQD1 137 aa12.3□□□□□ -0.44
SMARCC2-202ENST00000347471 IGLV4-3A0A075B6K6 122 aa12.3□□□□□ -0.44
SMARCC2-202ENST00000347471 TRBV7-3A0A075B6L6 115 aa12.3□□□□□ -0.44
SMARCC2-202ENST00000347471 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
SMARCC2-202ENST00000347471 Q6ZUT4 128 aa12.3□□□□□ -0.44
SMARCC2-202ENST00000347471 HSD52Q0P140 79 aa12.29□□□□□ -0.44
SMARCC2-202ENST00000347471 A0A0J9YY99 117 aa12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 FXYD2P54710 66 aa12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 SFTA2Q6UW10 78 aa12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 IGLV4-69A0A075B6H9 119 aa12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 UBE2L6O14933 153 aa12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 LGALS3P17931 250 aaKnown RBP12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 LINC00469Q8N7U9 141 aa12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
SMARCC2-202ENST00000347471 H3BUT2 72 aa12.27□□□□□ -0.44
SMARCC2-202ENST00000347471 CYSRT1A8MQ03 144 aa12.27□□□□□ -0.45
SMARCC2-202ENST00000347471 UFSP1Q6NVU6 142 aa12.27□□□□□ -0.45
SMARCC2-202ENST00000347471 MRPL52Q86TS9 123 aaKnown RBP12.27□□□□□ -0.45
SMARCC2-202ENST00000347471 TRAV8-3A0A0A6YYJ7 113 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 TRAV4A0A0B4J268 109 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 A6NDN8 102 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 COX11Q9Y6N1 276 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 MYMXA0A1B0GTQ4 84 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 A8MZ25 164 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 GAGE6Q13070 117 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 LINC00694P0DN24 101 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 KRTAP24-1Q3LI83 254 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 CHCHD5Q9BSY4 110 aa12.26□□□□□ -0.45
SMARCC2-202ENST00000347471 PAPPA-AS1Q5QFB9 102 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 CITED1Q99966 193 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 MGAM2Q2M2H8 2515 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 DLEU1O43261 78 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 INSL3P51460 131 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 CLUHP3Q96NS8 147 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 A0A0U1RRA0 63 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 TAX1BP3O14907 124 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 FAM222AQ5U5X8 452 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
SMARCC2-202ENST00000347471 TMEM262E9PQX1 116 aa12.24□□□□□ -0.45
SMARCC2-202ENST00000347471 SPINK8P0C7L1 97 aa12.24□□□□□ -0.45
SMARCC2-202ENST00000347471 PLAC8L1A1L4L8 177 aa12.24□□□□□ -0.45
SMARCC2-202ENST00000347471 E9PLD3 99 aa12.23□□□□□ -0.45
SMARCC2-202ENST00000347471 NPC2P61916 151 aa12.23□□□□□ -0.45
SMARCC2-202ENST00000347471 DAZ2Q13117 558 aaKnown RBP12.23□□□□□ -0.45
SMARCC2-202ENST00000347471 TSPEAR-AS2P59090 65 aa12.22□□□□□ -0.45
SMARCC2-202ENST00000347471 LURAP1LQ8IV03 231 aa12.22□□□□□ -0.45
SMARCC2-202ENST00000347471 LINC01549A6NIU2 74 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms