RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 DEFA6Q01524 100 aa7.71□□□□□ -1.17
ECM1-201ENST00000346569 C12orf74Q32Q52 190 aa7.71□□□□□ -1.17
ECM1-201ENST00000346569 C20orf203Q8NBC4 194 aa7.71□□□□□ -1.17
ECM1-201ENST00000346569 ZMAT4Q9H898 229 aa7.71□□□□□ -1.17
ECM1-201ENST00000346569 PRO0255Q9UI72 69 aa7.71□□□□□ -1.17
ECM1-201ENST00000346569 GAGE12JA6NER3 117 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 IGIPA6NJ69 53 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 ATP5LO75964 103 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 GAGE1Q13065 139 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 GAGE4Q13068 117 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 GAGE5Q13069 117 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 LINC01545Q5VT33 79 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 ERASQ7Z444 233 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 DAZ4Q86SG3 579 aaKnown RBP7.7□□□□□ -1.18
ECM1-201ENST00000346569 PHLDA1Q8WV24 401 aaPredicted RBP7.7□□□□□ -1.18
ECM1-201ENST00000346569 PRADC1Q9BSG0 188 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 CHCHD7Q9BUK0 85 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 DAZ3Q9NR90 486 aaKnown RBP7.7□□□□□ -1.18
ECM1-201ENST00000346569 CYSLTR1Q9Y271 337 aa7.7□□□□□ -1.18
ECM1-201ENST00000346569 IGHV3-38A0A0C4DH36 116 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 ATP5G1P05496 136 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 RPL39P62891 51 aaKnown RBP7.69□□□□□ -1.18
ECM1-201ENST00000346569 LGALS9CQ6DKI2 356 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 TEX43Q6ZNM6 134 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 NTM-AS1Q6ZSK4 140 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 VSIG2Q96IQ7 327 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 SCGB3A1Q96QR1 104 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 SPATA25Q9BR10 227 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 COTL1Q14019 142 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 GTSF1LQ9H1H1 148 aa7.69□□□□□ -1.18
ECM1-201ENST00000346569 DNAH9Q9NYC9 4486 aa7.68□□□□□ -1.18
ECM1-201ENST00000346569 A0A0J9YWU9 116 aa7.68□□□□□ -1.18
ECM1-201ENST00000346569 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.68□□□□□ -1.18
ECM1-201ENST00000346569 PAX4O43316 350 aa7.68□□□□□ -1.18
ECM1-201ENST00000346569 MRAPQ8TCY5 172 aa7.68□□□□□ -1.18
ECM1-201ENST00000346569 TIMM17AQ99595 171 aa7.68□□□□□ -1.18
ECM1-201ENST00000346569 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
ECM1-201ENST00000346569 HUWE1Q7Z6Z7 4374 aaKnown RBP7.67□□□□□ -1.18
ECM1-201ENST00000346569 PRSS1P07477 247 aa7.67□□□□□ -1.18
ECM1-201ENST00000346569 GYPEP15421 78 aa7.67□□□□□ -1.18
ECM1-201ENST00000346569 ODF1Q14990 250 aa7.67□□□□□ -1.18
ECM1-201ENST00000346569 FAM104AQ969W3 186 aa7.67□□□□□ -1.18
ECM1-201ENST00000346569 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
ECM1-201ENST00000346569 TRAV12-1A0A0B4J245 112 aa7.66□□□□□ -1.18
ECM1-201ENST00000346569 F5H768 121 aa7.66□□□□□ -1.18
ECM1-201ENST00000346569 ZNF664Q8N3J9 261 aa7.66□□□□□ -1.18
ECM1-201ENST00000346569 BAALCQ8WXS3 180 aa7.66□□□□□ -1.18
ECM1-201ENST00000346569 TENM3Q9P273 2699 aa7.66□□□□□ -1.18
ECM1-201ENST00000346569 A0A087WX48 190 aa7.65□□□□□ -1.18
ECM1-201ENST00000346569 C20orf202A1L168 122 aa7.65□□□□□ -1.18
ECM1-201ENST00000346569 H0Y8G0 127 aa7.65□□□□□ -1.18
ECM1-201ENST00000346569 NPSP0C0P6 89 aa7.65□□□□□ -1.18
ECM1-201ENST00000346569 S100A12P80511 92 aa7.65□□□□□ -1.18
ECM1-201ENST00000346569 Q6ZN92 141 aa7.65□□□□□ -1.18
ECM1-201ENST00000346569 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.18
ECM1-201ENST00000346569 PMCHL2Q9BQD1 86 aa7.65□□□□□ -1.18
ECM1-201ENST00000346569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.64□□□□□ -1.19
ECM1-201ENST00000346569 TRAV26-1A0A087WT03 109 aa7.64□□□□□ -1.19
ECM1-201ENST00000346569 IGKV2-29A2NJV5 120 aaPredicted RBP7.64□□□□□ -1.19
ECM1-201ENST00000346569 PRSS29PA6NIE9 313 aa7.64□□□□□ -1.19
ECM1-201ENST00000346569 TMEM97Q5BJF2 176 aa7.64□□□□□ -1.19
ECM1-201ENST00000346569 Q6ZTC4 211 aa7.64□□□□□ -1.19
ECM1-201ENST00000346569 ATOH7Q8N100 152 aa7.64□□□□□ -1.19
ECM1-201ENST00000346569 OPRPNQ99935 248 aaPredicted RBP7.64□□□□□ -1.19
ECM1-201ENST00000346569 B9D2Q9BPU9 175 aa7.64□□□□□ -1.19
ECM1-201ENST00000346569 TIMM21Q9BVV7 248 aa7.64□□□□□ -1.19
ECM1-201ENST00000346569 UBE2D4Q9Y2X8 147 aa7.64□□□□□ -1.19
ECM1-201ENST00000346569 IGLV4-3A0A075B6K6 122 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 TRAV9-2A0A087WT02 112 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 TRBV6-8A0A0A6YYG3 113 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 A0A0J9YY99 117 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 H3BNG1 76 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 C11orf45Q8TAV5 145 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 AMELXQ99217 191 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 CST9LQ9H4G1 147 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 SPANXA1Q9NS26 97 aa7.63□□□□□ -1.19
ECM1-201ENST00000346569 H7C423 109 aa7.62□□□□□ -1.19
ECM1-201ENST00000346569 HTN3P15516 51 aa7.62□□□□□ -1.19
ECM1-201ENST00000346569 NANOS2P60321 138 aaKnown RBP7.62□□□□□ -1.19
ECM1-201ENST00000346569 PMVKQ15126 192 aa7.62□□□□□ -1.19
ECM1-201ENST00000346569 MRPL23Q16540 153 aaKnown RBP7.62□□□□□ -1.19
ECM1-201ENST00000346569 MAJINQ3KP22 176 aa7.62□□□□□ -1.19
ECM1-201ENST00000346569 ZC2HC1BQ5TFG8 222 aa7.62□□□□□ -1.19
ECM1-201ENST00000346569 CEMP1Q6PRD7 247 aaPredicted RBP7.62□□□□□ -1.19
ECM1-201ENST00000346569 MRPL52Q86TS9 123 aaKnown RBP7.62□□□□□ -1.19
ECM1-201ENST00000346569 MRPL35Q9NZE8 188 aaKnown RBP7.62□□□□□ -1.19
ECM1-201ENST00000346569 CSDC2Q9Y534 153 aaKnown RBP7.62□□□□□ -1.19
ECM1-201ENST00000346569 COL7A1Q02388 2944 aa7.62□□□□□ -1.19
ECM1-201ENST00000346569 TRBV25-1A0A075B6N4 114 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 A0A096LPF7 62 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 MRPS36P82909 103 aaKnown RBP7.61□□□□□ -1.19
ECM1-201ENST00000346569 TMEM243Q9BU79 118 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 VAMP8Q9BV40 100 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 F8VRH5 84 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 DPM2O94777 84 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 IGKCP01834 107 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 FGF6P10767 208 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 PAPPA-AS1Q5QFB9 102 aa7.61□□□□□ -1.19
ECM1-201ENST00000346569 VCX2Q9H322 139 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms