RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SDHAF1A6NFY7 115 aa9.53□□□□□ -0.88
TPM4-202ENST00000344824 H3BNG1 76 aa9.53□□□□□ -0.88
TPM4-202ENST00000344824 NDUFA6P56556 154 aa9.53□□□□□ -0.88
TPM4-202ENST00000344824 BAGE3Q86Y29 109 aa9.53□□□□□ -0.88
TPM4-202ENST00000344824 IFI27P40305 119 aaPredicted RBP9.52□□□□□ -0.89
TPM4-202ENST00000344824 PRSS3P2Q8NHM4 247 aa9.52□□□□□ -0.89
TPM4-202ENST00000344824 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
TPM4-202ENST00000344824 SMIM2Q9BVW6 85 aa9.52□□□□□ -0.89
TPM4-202ENST00000344824 DNAH17Q9UFH2 4485 aa9.51□□□□□ -0.89
TPM4-202ENST00000344824 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
TPM4-202ENST00000344824 TRBV6-5A0A0K0K1A5 114 aa9.51□□□□□ -0.89
TPM4-202ENST00000344824 PMCHP20382 165 aa9.51□□□□□ -0.89
TPM4-202ENST00000344824 ESRGQ1W209 222 aa9.51□□□□□ -0.89
TPM4-202ENST00000344824 RNASEKQ6P5S7 137 aaKnown RBP9.51□□□□□ -0.89
TPM4-202ENST00000344824 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
TPM4-202ENST00000344824 TMEM70Q9BUB7 260 aa9.51□□□□□ -0.89
TPM4-202ENST00000344824 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
TPM4-202ENST00000344824 NBDYA0A0U1RRE5 68 aa9.5□□□□□ -0.89
TPM4-202ENST00000344824 Q6ZR54 194 aa9.5□□□□□ -0.89
TPM4-202ENST00000344824 FA2HQ7L5A8 372 aa9.5□□□□□ -0.89
TPM4-202ENST00000344824 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 TCAPO15273 167 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 POLR2KP53803 58 aaKnown RBP9.49□□□□□ -0.89
TPM4-202ENST00000344824 UBE2D3P61077 147 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 UBE2D2P62837 147 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 Q0VG73 95 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 MRPL23Q16540 153 aaKnown RBP9.49□□□□□ -0.89
TPM4-202ENST00000344824 C1orf134Q5TEV5 83 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 NIT1Q86X76 327 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 Q8N8P6 123 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 Q9H8V8 135 aa9.49□□□□□ -0.89
TPM4-202ENST00000344824 MRPS16Q9Y3D3 137 aaKnown RBP9.49□□□□□ -0.89
TPM4-202ENST00000344824 VCYO14598 125 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 RTL8CO15255 209 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 SERF1AO75920 110 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 S100A6P06703 90 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 NXT2Q9NPJ8 142 aaKnown RBP9.48□□□□□ -0.89
TPM4-202ENST00000344824 I3L3M4 83 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 LINC00614P0C842 121 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 FCER1GP30273 86 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 ATP6V0E2Q8NHE4 81 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 KIR2DL4Q99706 377 aa9.48□□□□□ -0.89
TPM4-202ENST00000344824 FAT2Q9NYQ8 4349 aa9.47□□□□□ -0.89
TPM4-202ENST00000344824 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
TPM4-202ENST00000344824 PRSS47A8MTI9 375 aa9.47□□□□□ -0.89
TPM4-202ENST00000344824 NUPR1O60356 82 aa9.47□□□□□ -0.89
TPM4-202ENST00000344824 LINC00694P0DN24 101 aa9.47□□□□□ -0.89
TPM4-202ENST00000344824 LINC00310P59036 64 aa9.47□□□□□ -0.89
TPM4-202ENST00000344824 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
TPM4-202ENST00000344824 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
TPM4-202ENST00000344824 TSHBP01222 138 aa9.46□□□□□ -0.9
TPM4-202ENST00000344824 RPL32P62910 135 aaKnown RBP9.46□□□□□ -0.9
TPM4-202ENST00000344824 COTL1Q14019 142 aa9.46□□□□□ -0.9
TPM4-202ENST00000344824 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.9
TPM4-202ENST00000344824 DAZ4Q86SG3 579 aaKnown RBP9.46□□□□□ -0.9
TPM4-202ENST00000344824 UPK3BQ9BT76 320 aa9.46□□□□□ -0.9
TPM4-202ENST00000344824 DAZ3Q9NR90 486 aaKnown RBP9.46□□□□□ -0.9
TPM4-202ENST00000344824 AP5S1Q9NUS5 200 aa9.46□□□□□ -0.9
TPM4-202ENST00000344824 C6orf223Q8N319 242 aa9.45□□□□□ -0.9
TPM4-202ENST00000344824 SIVA1O15304 175 aa9.44□□□□□ -0.9
TPM4-202ENST00000344824 HSBP1O75506 76 aa9.44□□□□□ -0.9
TPM4-202ENST00000344824 LAGE3Q14657 143 aa9.44□□□□□ -0.9
TPM4-202ENST00000344824 LYPD5Q6UWN5 251 aa9.44□□□□□ -0.9
TPM4-202ENST00000344824 FAM19A2Q8N3H0 131 aa9.44□□□□□ -0.9
TPM4-202ENST00000344824 CHCHD1Q96BP2 118 aaKnown RBP9.44□□□□□ -0.9
TPM4-202ENST00000344824 KRTAP1-5Q9BYS1 174 aa9.44□□□□□ -0.9
TPM4-202ENST00000344824 BTF3P20290 206 aaKnown RBP9.43□□□□□ -0.9
TPM4-202ENST00000344824 AMTP48728 403 aa9.43□□□□□ -0.9
TPM4-202ENST00000344824 SNRPEP62304 92 aaKnown RBP9.43□□□□□ -0.9
TPM4-202ENST00000344824 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
TPM4-202ENST00000344824 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
TPM4-202ENST00000344824 NTM-AS1Q6ZSK4 140 aa9.42□□□□□ -0.9
TPM4-202ENST00000344824 LINC00528Q8N1L1 170 aa9.42□□□□□ -0.9
TPM4-202ENST00000344824 GTSF1LQ9H1H1 148 aa9.42□□□□□ -0.9
TPM4-202ENST00000344824 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
TPM4-202ENST00000344824 IGHV1-24A0A0C4DH33 117 aa9.41□□□□□ -0.9
TPM4-202ENST00000344824 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
TPM4-202ENST00000344824 SH2D6Q7Z4S9 175 aa9.41□□□□□ -0.9
TPM4-202ENST00000344824 WFDC10BQ8IUB3 73 aa9.41□□□□□ -0.9
TPM4-202ENST00000344824 TRBV25-1A0A075B6N4 114 aa9.4□□□□□ -0.9
TPM4-202ENST00000344824 LINC01546A6NGU7 62 aa9.4□□□□□ -0.9
TPM4-202ENST00000344824 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
TPM4-202ENST00000344824 CHCHD7Q9BUK0 85 aa9.4□□□□□ -0.9
TPM4-202ENST00000344824 PKD1P98161 4303 aa9.4□□□□□ -0.91
TPM4-202ENST00000344824 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 K7EMI3 77 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 HBDP02042 147 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 TNP2Q05952 138 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 TMEM97Q5BJF2 176 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 HIST3H2BBQ8N257 126 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 TMEM243Q9BU79 118 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 PKHD1P08F94 4074 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 A0A096LNJ9 63 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 C5orf52A6NGY3 159 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 UBE2L6O14933 153 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 ESDP10768 282 aa9.39□□□□□ -0.91
TPM4-202ENST00000344824 FABP4P15090 132 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms