RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 NOP10Q9NPE3 64 aaKnown RBP9.58□□□□□ -0.88
HERPUD1-202ENST00000344114 TRAV9-2A0A087WT02 112 aa9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 H0Y8G0 127 aa9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 I3L3M4 83 aa9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 C18orf15Q96N68 181 aa9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 CYSLTR1Q9Y271 337 aa9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 TP53TG1Q9Y2A0 90 aa9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 KLK5Q9Y337 293 aaPredicted RBP9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 PAM16Q9Y3D7 125 aa9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
HERPUD1-202ENST00000344114 SPATA45Q537H7 98 aa9.56□□□□□ -0.88
HERPUD1-202ENST00000344114 C2orf66Q6UXQ4 117 aa9.56□□□□□ -0.88
HERPUD1-202ENST00000344114 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
HERPUD1-202ENST00000344114 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
HERPUD1-202ENST00000344114 X6R8D5 127 aa9.56□□□□□ -0.88
HERPUD1-202ENST00000344114 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-202ENST00000344114 ATOH7Q8N100 152 aa9.55□□□□□ -0.88
HERPUD1-202ENST00000344114 NEXN-AS1Q8NBZ9 246 aa9.55□□□□□ -0.88
HERPUD1-202ENST00000344114 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
HERPUD1-202ENST00000344114 HSBP1L1C9JCN9 74 aa9.54□□□□□ -0.88
HERPUD1-202ENST00000344114 K7EQD1 137 aa9.54□□□□□ -0.88
HERPUD1-202ENST00000344114 ZNF479Q96JC4 524 aa9.54□□□□□ -0.88
HERPUD1-202ENST00000344114 SCGB3A1Q96QR1 104 aa9.54□□□□□ -0.88
HERPUD1-202ENST00000344114 TRGV2A0A075B6R0 118 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 GAGE12BA1L429 117 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 GAGE7O76087 117 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 TSHBP01222 138 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 PRSS1P07477 247 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 GAGE12FP0CL80 117 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 GAGE12GP0CL81 117 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 GAGE12IP0CL82 117 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 P0DMU3 169 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 FAM231AP0DMU4 169 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 FAM231CP0DMU5 169 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 DDTP30046 118 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 DEFB135Q30KP9 77 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 Q6ZN92 141 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 Q6ZSN1 163 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 ERASQ7Z444 233 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 LINC00612Q8N6U2 182 aa9.53□□□□□ -0.88
HERPUD1-202ENST00000344114 TRAV12-1A0A0B4J245 112 aa9.52□□□□□ -0.88
HERPUD1-202ENST00000344114 ODF1Q14990 250 aa9.52□□□□□ -0.88
HERPUD1-202ENST00000344114 TIMM17AQ99595 171 aa9.52□□□□□ -0.88
HERPUD1-202ENST00000344114 RYR1P21817 5038 aa9.52□□□□□ -0.89
HERPUD1-202ENST00000344114 LYRM9A8MSI8 78 aa9.51□□□□□ -0.89
HERPUD1-202ENST00000344114 LINC00587B1AMM8 73 aa9.51□□□□□ -0.89
HERPUD1-202ENST00000344114 PHLDA1Q8WV24 401 aaPredicted RBP9.51□□□□□ -0.89
HERPUD1-202ENST00000344114 TMEM141Q96I45 108 aa9.51□□□□□ -0.89
HERPUD1-202ENST00000344114 PMCHL2Q9BQD1 86 aa9.51□□□□□ -0.89
HERPUD1-202ENST00000344114 A0A087WX48 190 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 MIFP14174 115 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 DNAH6Q9C0G6 4158 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 TRBV7-3A0A075B6L6 115 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 TRBV6-4A0A1B0GX49 114 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 hDV102S1A0JD36 115 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 MAJINQ3KP22 176 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 C20orf203Q8NBC4 194 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 OR11H2Q8NH07 326 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 RNF183Q96D59 192 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 MIEN1Q9BRT3 115 aa9.5□□□□□ -0.89
HERPUD1-202ENST00000344114 TRGV4A0A0C4DH28 118 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 IGIPA6NJ69 53 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 DPM2O94777 84 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 IGKCP01834 107 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 IGLC3P0DOY3 106 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 EMP1P54849 157 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 COTL1Q14019 142 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 SLC25A29Q8N8R3 303 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 BAALCQ8WXS3 180 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 DKK2Q9UBU2 259 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 UQCR10Q9UDW1 63 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 VPS13DQ5THJ4 4388 aa9.49□□□□□ -0.89
HERPUD1-202ENST00000344114 F8VRH5 84 aa9.48□□□□□ -0.89
HERPUD1-202ENST00000344114 NPSP0C0P6 89 aa9.48□□□□□ -0.89
HERPUD1-202ENST00000344114 PLNP26678 52 aa9.48□□□□□ -0.89
HERPUD1-202ENST00000344114 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
HERPUD1-202ENST00000344114 IGHV4-28A0A0C4DH34 117 aa9.47□□□□□ -0.89
HERPUD1-202ENST00000344114 UBE2D3P61077 147 aa9.47□□□□□ -0.89
HERPUD1-202ENST00000344114 UBE2D2P62837 147 aa9.47□□□□□ -0.89
HERPUD1-202ENST00000344114 DAZ4Q86SG3 579 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-202ENST00000344114 Q8NAQ8 132 aa9.47□□□□□ -0.89
HERPUD1-202ENST00000344114 DAZ3Q9NR90 486 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-202ENST00000344114 MRPL35Q9NZE8 188 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-202ENST00000344114 Q9UF83 564 aa9.47□□□□□ -0.89
HERPUD1-202ENST00000344114 FHL2Q14192 279 aa9.46□□□□□ -0.9
HERPUD1-202ENST00000344114 PAPPA-AS1Q5QFB9 102 aa9.46□□□□□ -0.9
HERPUD1-202ENST00000344114 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.9
HERPUD1-202ENST00000344114 DEFB104AQ8WTQ1 72 aa9.46□□□□□ -0.9
HERPUD1-202ENST00000344114 PRADC1Q9BSG0 188 aa9.46□□□□□ -0.9
HERPUD1-202ENST00000344114 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
HERPUD1-202ENST00000344114 CHTOPQ9Y3Y2 248 aaKnown RBP9.46□□□□□ -0.9
HERPUD1-202ENST00000344114 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.9
HERPUD1-202ENST00000344114 TEX48A0A1B0GUV7 120 aa9.45□□□□□ -0.9
HERPUD1-202ENST00000344114 DEFB130BP0DP73 79 aa9.45□□□□□ -0.9
HERPUD1-202ENST00000344114 DEFB130AP0DP74 79 aa9.45□□□□□ -0.9
HERPUD1-202ENST00000344114 PMVKQ15126 192 aa9.45□□□□□ -0.9
HERPUD1-202ENST00000344114 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms