RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 KIAA1549LQ6ZVL6 1849 aa6.34□□□□□ -1.4
FGD6-201ENST00000343958 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 NUP210LQ5VU65 1888 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 NDUFA7O95182 113 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 JMJD7-PLA2G4BH0Y9G9 81 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 POM121L12Q8N7R1 296 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 UBE2D1P51668 147 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 SDIM1Q6ZPB5 146 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
FGD6-201ENST00000343958 IGLV4-69A0A075B6H9 119 aa6.32□□□□□ -1.4
FGD6-201ENST00000343958 ATOX1O00244 68 aa6.32□□□□□ -1.4
FGD6-201ENST00000343958 SMR3AQ99954 134 aa6.32□□□□□ -1.4
FGD6-201ENST00000343958 LYRM9A8MSI8 78 aa6.32□□□□□ -1.4
FGD6-201ENST00000343958 C11orf45Q8TAV5 145 aa6.32□□□□□ -1.4
FGD6-201ENST00000343958 IGKV2-24A0A0C4DH68 120 aa6.32□□□□□ -1.4
FGD6-201ENST00000343958 LINC00959A0A1B0GUT2 108 aa6.32□□□□□ -1.4
FGD6-201ENST00000343958 LINC00643Q86TS7 51 aa6.32□□□□□ -1.4
FGD6-201ENST00000343958 CNFNQ9BYD5 112 aa6.31□□□□□ -1.4
FGD6-201ENST00000343958 FUSP35637 526 aaKnown RBP eCLIP6.31□□□□□ -1.4
FGD6-201ENST00000343958 UFSP1Q6NVU6 142 aa6.31□□□□□ -1.4
FGD6-201ENST00000343958 ODF3L2Q3SX64 289 aa6.31□□□□□ -1.4
FGD6-201ENST00000343958 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
FGD6-201ENST00000343958 H7C423 109 aa6.31□□□□□ -1.4
FGD6-201ENST00000343958 TMEM256-PLSCR3K7ERE1 68 aa6.31□□□□□ -1.4
FGD6-201ENST00000343958 TP53BP1Q12888 1972 aaPredicted RBP6.31□□□□□ -1.4
FGD6-201ENST00000343958 UBE2AP49459 152 aa6.3□□□□□ -1.4
FGD6-201ENST00000343958 Q6ZSN1 163 aa6.3□□□□□ -1.4
FGD6-201ENST00000343958 CHCHD7Q9BUK0 85 aa6.3□□□□□ -1.4
FGD6-201ENST00000343958 COX6A2Q02221 97 aa6.3□□□□□ -1.4
FGD6-201ENST00000343958 IBA57-AS1B1ANH7 110 aa6.3□□□□□ -1.4
FGD6-201ENST00000343958 DOCK9Q9BZ29 2069 aa6.3□□□□□ -1.4
FGD6-201ENST00000343958 SMIM9A6NGZ8 99 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 CITED1Q99966 193 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 C6orf99Q4VX62 202 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 IGLV2-18A0A075B6J9 118 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 DEFB131BA0A096LNP1 70 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 UBE2D3P61077 147 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 UBE2D2P62837 147 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 C1orf158Q8N1D5 194 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 LINC00694P0DN24 101 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 ALPK3Q96L96 1907 aa6.29□□□□□ -1.4
FGD6-201ENST00000343958 CLUHP3Q96NS8 147 aa6.28□□□□□ -1.4
FGD6-201ENST00000343958 SMIM11BQ8TCY0 68 aa6.28□□□□□ -1.4
FGD6-201ENST00000343958 NDUFV3P56181 108 aaKnown RBP6.28□□□□□ -1.4
FGD6-201ENST00000343958 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
FGD6-201ENST00000343958 UPK3BQ9BT76 320 aa6.28□□□□□ -1.4
FGD6-201ENST00000343958 PLA2G2AP14555 144 aa6.28□□□□□ -1.4
FGD6-201ENST00000343958 XGP55808 180 aa6.28□□□□□ -1.4
FGD6-201ENST00000343958 LINC00242Q5T6M2 205 aa6.28□□□□□ -1.4
FGD6-201ENST00000343958 ENHOQ6UWT2 76 aa6.27□□□□□ -1.41
FGD6-201ENST00000343958 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
FGD6-201ENST00000343958 COX8CQ7Z4L0 72 aa6.27□□□□□ -1.41
FGD6-201ENST00000343958 A0A096LNI7 61 aa6.27□□□□□ -1.41
FGD6-201ENST00000343958 FAM19A5Q7Z5A7 132 aaPredicted RBP6.27□□□□□ -1.41
FGD6-201ENST00000343958 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.27□□□□□ -1.41
FGD6-201ENST00000343958 LST1O00453 97 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 HIGD2AQ9BW72 106 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 TNRC6BQ9UPQ9 1833 aaKnown RBP6.26□□□□□ -1.41
FGD6-201ENST00000343958 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 TIMM17BO60830 172 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 FAM19A1Q7Z5A9 133 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 SPATA25Q9BR10 227 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 HILS1P60008 231 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 WFDC9Q8NEX5 89 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 MIFP14174 115 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 ADAMTS9Q9P2N4 1935 aa6.26□□□□□ -1.41
FGD6-201ENST00000343958 DENND4AQ7Z401 1863 aa6.25□□□□□ -1.41
FGD6-201ENST00000343958 RETNQ9HD89 108 aa6.25□□□□□ -1.41
FGD6-201ENST00000343958 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
FGD6-201ENST00000343958 SMIM1B2RUZ4 78 aa6.24□□□□□ -1.41
FGD6-201ENST00000343958 CD164L2Q6UWJ8 174 aa6.24□□□□□ -1.41
FGD6-201ENST00000343958 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.24□□□□□ -1.41
FGD6-201ENST00000343958 H3BQ85 93 aa6.24□□□□□ -1.41
FGD6-201ENST00000343958 C20orf197Q8N268 126 aa6.24□□□□□ -1.41
FGD6-201ENST00000343958 IGKV2-28A0A075B6P5 120 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 IGKV2D-28P01615 120 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 OXLD1Q5BKU9 147 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 TMEM258P61165 79 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 SYCNQ0VAF6 134 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
FGD6-201ENST00000343958 CCDC179H3BU77 68 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 C5orf47Q569G3 176 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 Q6ZQY7 126 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 J3KT08 172 aa6.23□□□□□ -1.41
FGD6-201ENST00000343958 SNRNP200O75643 2136 aaKnown RBP6.22□□□□□ -1.41
FGD6-201ENST00000343958 UTRNP46939 3433 aa6.22□□□□□ -1.41
FGD6-201ENST00000343958 BPY2O14599 106 aa6.22□□□□□ -1.41
FGD6-201ENST00000343958 KPRPQ5T749 579 aaPredicted RBP6.22□□□□□ -1.41
FGD6-201ENST00000343958 TECTAO75443 2155 aa6.22□□□□□ -1.41
FGD6-201ENST00000343958 FHL2Q14192 279 aa6.22□□□□□ -1.41
FGD6-201ENST00000343958 PRR3P79522 188 aaKnown RBP6.22□□□□□ -1.41
FGD6-201ENST00000343958 LELP1Q5T871 98 aa6.21□□□□□ -1.41
FGD6-201ENST00000343958 KIF25-AS1Q9Y6Z4 181 aa6.21□□□□□ -1.41
FGD6-201ENST00000343958 NANOS2P60321 138 aaKnown RBP6.21□□□□□ -1.41
FGD6-201ENST00000343958 PI4KAP42356 2102 aa6.21□□□□□ -1.41
FGD6-201ENST00000343958 ZNF407Q9C0G0 2248 aa6.21□□□□□ -1.41
FGD6-201ENST00000343958 RPL37AP8A6NKH3 93 aa6.21□□□□□ -1.42
FGD6-201ENST00000343958 H0Y9J4 135 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms