RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 SPATA25Q9BR10 227 aa14.68□□□□□ -0.06
SPG7-202ENST00000341316 LOC107984156A0A0G2JMH3 177 aa14.68□□□□□ -0.06
SPG7-202ENST00000341316 KRTAP1-1Q07627 177 aa14.68□□□□□ -0.06
SPG7-202ENST00000341316 ARL17AQ8IVW1 177 aa14.68□□□□□ -0.06
SPG7-202ENST00000341316 OPRPNQ99935 248 aaPredicted RBP14.68□□□□□ -0.06
SPG7-202ENST00000341316 CFAP126Q5VTH2 177 aa14.67□□□□□ -0.06
SPG7-202ENST00000341316 PSMB2P49721 201 aa14.67□□□□□ -0.06
SPG7-202ENST00000341316 SMCPP49901 116 aaPredicted RBP14.67□□□□□ -0.06
SPG7-202ENST00000341316 CD28P10747 220 aa14.66□□□□□ -0.06
SPG7-202ENST00000341316 NSUN5P1Q3KNT7 163 aa14.66□□□□□ -0.06
SPG7-202ENST00000341316 UNC79Q9P2D8 2635 aa14.66□□□□□ -0.06
SPG7-202ENST00000341316 NDUFA11Q86Y39 141 aa14.66□□□□□ -0.06
SPG7-202ENST00000341316 KMT2BQ9UMN6 2715 aaPredicted RBP14.65□□□□□ -0.06
SPG7-202ENST00000341316 Q9UF83 564 aa14.65□□□□□ -0.06
SPG7-202ENST00000341316 SCGB1A1P11684 91 aa14.64□□□□□ -0.07
SPG7-202ENST00000341316 UBE2D3P61077 147 aa14.64□□□□□ -0.07
SPG7-202ENST00000341316 UBE2D2P62837 147 aa14.64□□□□□ -0.07
SPG7-202ENST00000341316 RHOHQ15669 191 aa14.64□□□□□ -0.07
SPG7-202ENST00000341316 I3L3M4 83 aa14.64□□□□□ -0.07
SPG7-202ENST00000341316 IGHV3-30P01768 117 aa14.64□□□□□ -0.07
SPG7-202ENST00000341316 IGHV3-30-5P0DP03 117 aa14.64□□□□□ -0.07
SPG7-202ENST00000341316 ODF3L2Q3SX64 289 aa14.64□□□□□ -0.07
SPG7-202ENST00000341316 FHL3Q13643 280 aa14.63□□□□□ -0.07
SPG7-202ENST00000341316 Q6ZSN1 163 aa14.63□□□□□ -0.07
SPG7-202ENST00000341316 AMELXQ99217 191 aa14.63□□□□□ -0.07
SPG7-202ENST00000341316 C1QTNF4Q9BXJ3 329 aa14.63□□□□□ -0.07
SPG7-202ENST00000341316 M0R2P5 195 aa14.63□□□□□ -0.07
SPG7-202ENST00000341316 TEX29Q8N6K0 151 aa14.63□□□□□ -0.07
SPG7-202ENST00000341316 SLC25A29Q8N8R3 303 aa14.63□□□□□ -0.07
SPG7-202ENST00000341316 C11orf72Q8NBR9 251 aa14.63□□□□□ -0.07
SPG7-202ENST00000341316 J3QQQ9 107 aa14.62□□□□□ -0.07
SPG7-202ENST00000341316 C20orf203Q8NBC4 194 aa14.62□□□□□ -0.07
SPG7-202ENST00000341316 ZNF418Q8TF45 676 aaPredicted RBP14.62□□□□□ -0.07
SPG7-202ENST00000341316 LINC01587Q99440 93 aa14.62□□□□□ -0.07
SPG7-202ENST00000341316 CCL24O00175 119 aa14.62□□□□□ -0.07
SPG7-202ENST00000341316 CFC1BP0CG36 223 aa14.62□□□□□ -0.07
SPG7-202ENST00000341316 CFC1P0CG37 223 aa14.62□□□□□ -0.07
SPG7-202ENST00000341316 FOXI1Q12951 378 aa14.62□□□□□ -0.07
SPG7-202ENST00000341316 LGALS3P17931 250 aaKnown RBP14.61□□□□□ -0.07
SPG7-202ENST00000341316 CITED2Q99967 270 aaPredicted RBP14.61□□□□□ -0.07
SPG7-202ENST00000341316 FASNP49327 2511 aaKnown RBP14.61□□□□□ -0.07
SPG7-202ENST00000341316 ZNF415Q09FC8 603 aa14.61□□□□□ -0.07
SPG7-202ENST00000341316 ATP6V0E2Q8NHE4 81 aa14.61□□□□□ -0.07
SPG7-202ENST00000341316 EDA2RQ9HAV5 297 aa14.61□□□□□ -0.07
SPG7-202ENST00000341316 PLA2G2AP14555 144 aa14.6□□□□□ -0.07
SPG7-202ENST00000341316 YAE1D1Q9NRH1 226 aa14.6□□□□□ -0.07
SPG7-202ENST00000341316 JMJD1CQ15652 2540 aa14.59□□□□□ -0.07
SPG7-202ENST00000341316 NFE4Q86UQ8 179 aa14.59□□□□□ -0.07
SPG7-202ENST00000341316 A8MWV9 139 aa14.59□□□□□ -0.07
SPG7-202ENST00000341316 TCL1BO95988 128 aa14.59□□□□□ -0.07
SPG7-202ENST00000341316 LYRM7Q5U5X0 104 aa14.59□□□□□ -0.07
SPG7-202ENST00000341316 PTH2Q96A98 100 aa14.59□□□□□ -0.07
SPG7-202ENST00000341316 XCL2Q9UBD3 114 aa14.59□□□□□ -0.07
SPG7-202ENST00000341316 INSP01308 110 aa14.58□□□□□ -0.08
SPG7-202ENST00000341316 NACAE9PAV3 2078 aa14.58□□□□□ -0.08
SPG7-202ENST00000341316 LINC01006Q8NI28 216 aa14.58□□□□□ -0.08
SPG7-202ENST00000341316 LINC00467Q9BRT7 94 aa14.58□□□□□ -0.08
SPG7-202ENST00000341316 NOTCH3Q9UM47 2321 aa14.57□□□□□ -0.08
SPG7-202ENST00000341316 TMEM223A0PJW6 202 aa14.57□□□□□ -0.08
SPG7-202ENST00000341316 C10orf126Q8N4M7 172 aa14.57□□□□□ -0.08
SPG7-202ENST00000341316 IGLV4-3A0A075B6K6 122 aa14.57□□□□□ -0.08
SPG7-202ENST00000341316 IGHV3-64A0A075B6Q5 118 aa14.57□□□□□ -0.08
SPG7-202ENST00000341316 SETXQ7Z333 2677 aaKnown RBP14.56□□□□□ -0.08
SPG7-202ENST00000341316 LEPROTO15243 131 aa14.56□□□□□ -0.08
SPG7-202ENST00000341316 PIK3CD-AS1Q5SR53 167 aa14.56□□□□□ -0.08
SPG7-202ENST00000341316 FAM104AQ969W3 186 aa14.56□□□□□ -0.08
SPG7-202ENST00000341316 TRAV25A0A0B4J276 109 aa14.55□□□□□ -0.08
SPG7-202ENST00000341316 PRO1854Q9UHT4 67 aa14.55□□□□□ -0.08
SPG7-202ENST00000341316 ZNF22P17026 224 aaPredicted RBP14.55□□□□□ -0.08
SPG7-202ENST00000341316 C1orf158Q8N1D5 194 aa14.55□□□□□ -0.08
SPG7-202ENST00000341316 TNFRSF18Q9Y5U5 241 aa14.55□□□□□ -0.08
SPG7-202ENST00000341316 HECTD1Q9ULT8 2610 aa14.54□□□□□ -0.08
SPG7-202ENST00000341316 STHQ8IWL8 128 aa14.54□□□□□ -0.08
SPG7-202ENST00000341316 CLUHP3Q96NS8 147 aa14.54□□□□□ -0.08
SPG7-202ENST00000341316 CEMP1Q6PRD7 247 aaPredicted RBP14.54□□□□□ -0.08
SPG7-202ENST00000341316 TRBV20-1A0A075B6N2 111 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 IGHV3OR16-12A0A075B7B8 117 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 A0A0J9YXV3 536 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 A4D1N5 150 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 J3QKU1 62 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 RHODO00212 210 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 RNASE1P07998 156 aaKnown RBP14.53□□□□□ -0.08
SPG7-202ENST00000341316 BEAN1Q3B7T3 259 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 CDIP1Q9H305 208 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 GCN1Q92616 2671 aaKnown RBP14.53□□□□□ -0.08
SPG7-202ENST00000341316 EIF4EBP3O60516 100 aaPredicted RBP14.53□□□□□ -0.08
SPG7-202ENST00000341316 SCGB1C2P0DMR2 95 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 CARD19Q96LW7 228 aa14.53□□□□□ -0.08
SPG7-202ENST00000341316 SPXQ9BT56 116 aa14.52□□□□□ -0.08
SPG7-202ENST00000341316 NOTCH2Q04721 2471 aa14.52□□□□□ -0.09
SPG7-202ENST00000341316 TEN1Q86WV5 123 aa14.52□□□□□ -0.09
SPG7-202ENST00000341316 VCX2Q9H322 139 aa14.52□□□□□ -0.09
SPG7-202ENST00000341316 C16orf95Q9H693 158 aa14.52□□□□□ -0.09
SPG7-202ENST00000341316 PPDPFLQ8WWR9 84 aa14.51□□□□□ -0.09
SPG7-202ENST00000341316 RS1O15537 224 aa14.5□□□□□ -0.09
SPG7-202ENST00000341316 IGHV3-53P01767 116 aa14.5□□□□□ -0.09
SPG7-202ENST00000341316 CHCHD7Q9BUK0 85 aa14.5□□□□□ -0.09
SPG7-202ENST00000341316 SBSPONQ8IVN8 264 aa14.5□□□□□ -0.09
SPG7-202ENST00000341316 PYGO1Q9Y3Y4 419 aa14.5□□□□□ -0.09
SPG7-202ENST00000341316 IGHV3-38A0A0C4DH36 116 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms