RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 IGKV3OR2-268A0A0C4DH90 116 aa10.33□□□□□ -0.76
H3F3C-201ENST00000340398 GAGE12HA6NDE8 117 aa10.33□□□□□ -0.76
H3F3C-201ENST00000340398 MANBALQ9NQG1 85 aa10.33□□□□□ -0.76
H3F3C-201ENST00000340398 F2Z2F3 143 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 PHOX2AO14813 284 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 UBE2L6O14933 153 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 AMTP48728 403 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 SULT1A2P50226 295 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 COX6A2Q02221 97 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 PGLYRP4Q96LB8 373 aa10.32□□□□□ -0.76
H3F3C-201ENST00000340398 IFNA1P01562 189 aa10.31□□□□□ -0.76
H3F3C-201ENST00000340398 GNG4P50150 75 aa10.31□□□□□ -0.76
H3F3C-201ENST00000340398 COTL1Q14019 142 aa10.31□□□□□ -0.76
H3F3C-201ENST00000340398 HIGD2BQ4VC39 106 aa10.31□□□□□ -0.76
H3F3C-201ENST00000340398 PRSS3P2Q8NHM4 247 aa10.31□□□□□ -0.76
H3F3C-201ENST00000340398 DPH3P1Q9H4G8 78 aa10.31□□□□□ -0.76
H3F3C-201ENST00000340398 PLAC8Q9NZF1 115 aa10.31□□□□□ -0.76
H3F3C-201ENST00000340398 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
H3F3C-201ENST00000340398 TRAV26-2A0A0B4J265 109 aa10.3□□□□□ -0.76
H3F3C-201ENST00000340398 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
H3F3C-201ENST00000340398 ODF1Q14990 250 aa10.3□□□□□ -0.76
H3F3C-201ENST00000340398 WDR73Q6P4I2 378 aa10.3□□□□□ -0.76
H3F3C-201ENST00000340398 C9orf62Q8N4C0 152 aa10.3□□□□□ -0.76
H3F3C-201ENST00000340398 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
H3F3C-201ENST00000340398 TRAV1-1A0A0B4J248 108 aa10.29□□□□□ -0.76
H3F3C-201ENST00000340398 XKRY2A2RUG3 117 aa10.29□□□□□ -0.76
H3F3C-201ENST00000340398 EIF5AP63241 154 aaKnown RBP10.29□□□□□ -0.76
H3F3C-201ENST00000340398 TWIST1Q15672 202 aa10.29□□□□□ -0.76
H3F3C-201ENST00000340398 NUDT10Q8NFP7 164 aa10.29□□□□□ -0.76
H3F3C-201ENST00000340398 NUDT11Q96G61 164 aa10.29□□□□□ -0.76
H3F3C-201ENST00000340398 MED9Q9NWA0 146 aa10.29□□□□□ -0.76
H3F3C-201ENST00000340398 IGKV2-24A0A0C4DH68 120 aa10.28□□□□□ -0.76
H3F3C-201ENST00000340398 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
H3F3C-201ENST00000340398 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
H3F3C-201ENST00000340398 GTSF1Q8WW33 167 aa10.28□□□□□ -0.76
H3F3C-201ENST00000340398 FOXA3P55318 350 aaPredicted RBP10.27□□□□□ -0.77
H3F3C-201ENST00000340398 CFAP161Q6P656 301 aa10.27□□□□□ -0.77
H3F3C-201ENST00000340398 Q6ZNX1 250 aa10.27□□□□□ -0.77
H3F3C-201ENST00000340398 LYPD6BQ8NI32 183 aa10.27□□□□□ -0.77
H3F3C-201ENST00000340398 CHCHD10Q8WYQ3 142 aaPredicted RBP10.27□□□□□ -0.77
H3F3C-201ENST00000340398 RPL39LQ96EH5 51 aaKnown RBP10.27□□□□□ -0.77
H3F3C-201ENST00000340398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.26□□□□□ -0.77
H3F3C-201ENST00000340398 IGKV2-29A2NJV5 120 aaPredicted RBP10.26□□□□□ -0.77
H3F3C-201ENST00000340398 NDUFS6O75380 124 aaKnown RBP10.26□□□□□ -0.77
H3F3C-201ENST00000340398 MEF2BQ02080 365 aaPredicted RBP10.26□□□□□ -0.77
H3F3C-201ENST00000340398 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
H3F3C-201ENST00000340398 SMIM12Q96EX1 92 aa10.26□□□□□ -0.77
H3F3C-201ENST00000340398 LRP2P98164 4655 aa10.26□□□□□ -0.77
H3F3C-201ENST00000340398 PDE6DO43924 150 aa10.25□□□□□ -0.77
H3F3C-201ENST00000340398 CTRLP40313 264 aa10.25□□□□□ -0.77
H3F3C-201ENST00000340398 AMMECR1LQ6DCA0 310 aa10.25□□□□□ -0.77
H3F3C-201ENST00000340398 RNASEKQ6P5S7 137 aaKnown RBP10.25□□□□□ -0.77
H3F3C-201ENST00000340398 STPG4Q8N801 248 aa10.25□□□□□ -0.77
H3F3C-201ENST00000340398 RNASE7Q9H1E1 156 aaKnown RBP10.25□□□□□ -0.77
H3F3C-201ENST00000340398 TEX46H3BTG2 121 aa10.23□□□□□ -0.77
H3F3C-201ENST00000340398 K7EN84 100 aa10.23□□□□□ -0.77
H3F3C-201ENST00000340398 OCC1Q8TAD7 63 aa10.23□□□□□ -0.77
H3F3C-201ENST00000340398 LINC00526Q96FQ7 95 aa10.23□□□□□ -0.77
H3F3C-201ENST00000340398 LINC01600Q96MT4 127 aa10.23□□□□□ -0.77
H3F3C-201ENST00000340398 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
H3F3C-201ENST00000340398 BIN3Q9NQY0 253 aa10.23□□□□□ -0.77
H3F3C-201ENST00000340398 A0A096LNI7 61 aa10.22□□□□□ -0.77
H3F3C-201ENST00000340398 FGF6P10767 208 aa10.22□□□□□ -0.77
H3F3C-201ENST00000340398 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
H3F3C-201ENST00000340398 FOXI1Q12951 378 aa10.22□□□□□ -0.77
H3F3C-201ENST00000340398 GVQW2A0A096LPI5 108 aaPredicted RBP10.21□□□□□ -0.77
H3F3C-201ENST00000340398 FAM231BA6NCW3 169 aa10.21□□□□□ -0.77
H3F3C-201ENST00000340398 BCL2P10415 239 aa10.21□□□□□ -0.77
H3F3C-201ENST00000340398 RPP21Q9H633 154 aaKnown RBP10.21□□□□□ -0.77
H3F3C-201ENST00000340398 SDHAF1A6NFY7 115 aa10.2□□□□□ -0.78
H3F3C-201ENST00000340398 GAS8-AS1O95177 125 aa10.2□□□□□ -0.78
H3F3C-201ENST00000340398 NCR2O95944 276 aa10.2□□□□□ -0.78
H3F3C-201ENST00000340398 XCL1P47992 114 aa10.2□□□□□ -0.78
H3F3C-201ENST00000340398 APCSP02743 223 aa10.19□□□□□ -0.78
H3F3C-201ENST00000340398 EIF5AL1Q6IS14 154 aaKnown RBP10.19□□□□□ -0.78
H3F3C-201ENST00000340398 OR5A1Q8NGJ0 315 aa10.19□□□□□ -0.78
H3F3C-201ENST00000340398 H7C423 109 aa10.18□□□□□ -0.78
H3F3C-201ENST00000340398 PMCHP20382 165 aa10.18□□□□□ -0.78
H3F3C-201ENST00000340398 LINC00959A0A1B0GUT2 108 aa10.17□□□□□ -0.78
H3F3C-201ENST00000340398 CCL25O15444 150 aa10.17□□□□□ -0.78
H3F3C-201ENST00000340398 KRTAP10-8P60410 259 aa10.17□□□□□ -0.78
H3F3C-201ENST00000340398 SMIM15Q7Z3B0 74 aa10.17□□□□□ -0.78
H3F3C-201ENST00000340398 I3L3M4 83 aa10.16□□□□□ -0.78
H3F3C-201ENST00000340398 A0A0J9YXV3 536 aa10.15□□□□□ -0.78
H3F3C-201ENST00000340398 GATCO43716 136 aaKnown RBP10.15□□□□□ -0.78
H3F3C-201ENST00000340398 ESDP10768 282 aa10.15□□□□□ -0.78
H3F3C-201ENST00000340398 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
H3F3C-201ENST00000340398 BTF3L4Q96K17 158 aa10.15□□□□□ -0.78
H3F3C-201ENST00000340398 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
H3F3C-201ENST00000340398 TSHBP01222 138 aa10.14□□□□□ -0.79
H3F3C-201ENST00000340398 ZNF25P17030 456 aaPredicted RBP10.14□□□□□ -0.79
H3F3C-201ENST00000340398 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
H3F3C-201ENST00000340398 TMEM101Q96IK0 257 aa10.14□□□□□ -0.79
H3F3C-201ENST00000340398 CARD19Q96LW7 228 aa10.14□□□□□ -0.79
H3F3C-201ENST00000340398 TMEM242Q9NWH2 141 aa10.14□□□□□ -0.79
H3F3C-201ENST00000340398 TRBV6-5A0A0K0K1A5 114 aa10.13□□□□□ -0.79
H3F3C-201ENST00000340398 C4orf48Q5BLP8 95 aa10.13□□□□□ -0.79
H3F3C-201ENST00000340398 SPINK6Q6UWN8 80 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms