RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 TMEM223A0PJW6 202 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 ZNF415Q09FC8 603 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 AMELXQ99217 191 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 MAP6D1Q9H9H5 199 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 TNFRSF18Q9Y5U5 241 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 ITPR3Q14573 2671 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 LEPROTO15243 131 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 PROK1P58294 105 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 WFDC2Q14508 124 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
TNFSF13-201ENST00000338784 IGHV3-30P01768 117 aa11□□□□□ -0.65
TNFSF13-201ENST00000338784 PRM2P04554 102 aa11□□□□□ -0.65
TNFSF13-201ENST00000338784 IGHV3-30-5P0DP03 117 aa11□□□□□ -0.65
TNFSF13-201ENST00000338784 PYGO1Q9Y3Y4 419 aa11□□□□□ -0.65
TNFSF13-201ENST00000338784 RHODO00212 210 aa10.99□□□□□ -0.65
TNFSF13-201ENST00000338784 ZNF22P17026 224 aaPredicted RBP10.99□□□□□ -0.65
TNFSF13-201ENST00000338784 DEFB114Q30KQ6 69 aa10.99□□□□□ -0.65
TNFSF13-201ENST00000338784 PTH2Q96A98 100 aa10.99□□□□□ -0.65
TNFSF13-201ENST00000338784 RAX2Q96IS3 184 aa10.99□□□□□ -0.65
TNFSF13-201ENST00000338784 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
TNFSF13-201ENST00000338784 APOMO95445 188 aa10.99□□□□□ -0.65
TNFSF13-201ENST00000338784 LINC01587Q99440 93 aa10.99□□□□□ -0.65
TNFSF13-201ENST00000338784 TSPAN13O95857 204 aa10.98□□□□□ -0.65
TNFSF13-201ENST00000338784 CD28P10747 220 aa10.98□□□□□ -0.65
TNFSF13-201ENST00000338784 NDUFA11Q86Y39 141 aa10.98□□□□□ -0.65
TNFSF13-201ENST00000338784 TMEM86BQ8N661 226 aa10.98□□□□□ -0.65
TNFSF13-201ENST00000338784 LINC00467Q9BRT7 94 aa10.98□□□□□ -0.65
TNFSF13-201ENST00000338784 SORL1Q92673 2214 aa10.98□□□□□ -0.65
TNFSF13-201ENST00000338784 PRRC2AP48634 2157 aaKnown RBP10.98□□□□□ -0.65
TNFSF13-201ENST00000338784 TRAV25A0A0B4J276 109 aa10.97□□□□□ -0.65
TNFSF13-201ENST00000338784 CFAP126Q5VTH2 177 aa10.97□□□□□ -0.65
TNFSF13-201ENST00000338784 KRTAP1-3Q8IUG1 177 aa10.97□□□□□ -0.65
TNFSF13-201ENST00000338784 NF1P21359 2839 aa10.97□□□□□ -0.65
TNFSF13-201ENST00000338784 CRYBA4P53673 196 aa10.97□□□□□ -0.65
TNFSF13-201ENST00000338784 PRO0461Q9UI25 63 aa10.97□□□□□ -0.65
TNFSF13-201ENST00000338784 INSP01308 110 aa10.96□□□□□ -0.65
TNFSF13-201ENST00000338784 Q6ZSN1 163 aa10.96□□□□□ -0.65
TNFSF13-201ENST00000338784 C11orf72Q8NBR9 251 aa10.96□□□□□ -0.65
TNFSF13-201ENST00000338784 IGHV3-64A0A075B6Q5 118 aa10.96□□□□□ -0.66
TNFSF13-201ENST00000338784 LOC107984156A0A0G2JMH3 177 aa10.96□□□□□ -0.66
TNFSF13-201ENST00000338784 CFC1BP0CG36 223 aa10.96□□□□□ -0.66
TNFSF13-201ENST00000338784 CFC1P0CG37 223 aa10.96□□□□□ -0.66
TNFSF13-201ENST00000338784 ETDBQ3ZM63 59 aa10.96□□□□□ -0.66
TNFSF13-201ENST00000338784 Q6ZSV7 163 aa10.96□□□□□ -0.66
TNFSF13-201ENST00000338784 ARL17AQ8IVW1 177 aa10.96□□□□□ -0.66
TNFSF13-201ENST00000338784 FAM104AQ969W3 186 aa10.96□□□□□ -0.66
TNFSF13-201ENST00000338784 J3QR89 54 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 UBE2D3P61077 147 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 UBE2D2P62837 147 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 LYRM7Q5U5X0 104 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 HIST2H2BDQ6DRA6 164 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 SH2D6Q7Z4S9 175 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 MTURNQ8N3F0 131 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 FAM110AQ9BQ89 295 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 Q9UF83 564 aa10.95□□□□□ -0.66
TNFSF13-201ENST00000338784 MRPS36P82909 103 aaKnown RBP10.94□□□□□ -0.66
TNFSF13-201ENST00000338784 CEMP1Q6PRD7 247 aaPredicted RBP10.94□□□□□ -0.66
TNFSF13-201ENST00000338784 BEAN1Q3B7T3 259 aa10.94□□□□□ -0.66
TNFSF13-201ENST00000338784 SFTA2Q6UW10 78 aa10.94□□□□□ -0.66
TNFSF13-201ENST00000338784 TEX29Q8N6K0 151 aa10.94□□□□□ -0.66
TNFSF13-201ENST00000338784 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
TNFSF13-201ENST00000338784 IGHV3-53P01767 116 aa10.93□□□□□ -0.66
TNFSF13-201ENST00000338784 PSMB2P49721 201 aa10.93□□□□□ -0.66
TNFSF13-201ENST00000338784 C10orf126Q8N4M7 172 aa10.93□□□□□ -0.66
TNFSF13-201ENST00000338784 CHCHD7Q9BUK0 85 aa10.93□□□□□ -0.66
TNFSF13-201ENST00000338784 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
TNFSF13-201ENST00000338784 TIMM21Q9BVV7 248 aa10.92□□□□□ -0.66
TNFSF13-201ENST00000338784 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
TNFSF13-201ENST00000338784 PRO1854Q9UHT4 67 aa10.92□□□□□ -0.66
TNFSF13-201ENST00000338784 UBE2D4Q9Y2X8 147 aa10.92□□□□□ -0.66
TNFSF13-201ENST00000338784 RS1O15537 224 aa10.92□□□□□ -0.66
TNFSF13-201ENST00000338784 IGHV3-30-3P0DP02 117 aa10.92□□□□□ -0.66
TNFSF13-201ENST00000338784 ODF3L2Q3SX64 289 aa10.92□□□□□ -0.66
TNFSF13-201ENST00000338784 XCL2Q9UBD3 114 aa10.92□□□□□ -0.66
TNFSF13-201ENST00000338784 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
TNFSF13-201ENST00000338784 WIPF1O43516 503 aa10.91□□□□□ -0.66
TNFSF13-201ENST00000338784 STHQ8IWL8 128 aa10.91□□□□□ -0.66
TNFSF13-201ENST00000338784 RNASE13Q5GAN3 156 aaKnown RBP10.9□□□□□ -0.66
TNFSF13-201ENST00000338784 NIPBLQ6KC79 2804 aaeCLIP10.9□□□□□ -0.66
TNFSF13-201ENST00000338784 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.9□□□□□ -0.66
TNFSF13-201ENST00000338784 A0A0J9YXY3 114 aa10.9□□□□□ -0.66
TNFSF13-201ENST00000338784 TINCRA0A1B0GVN0 87 aa10.9□□□□□ -0.66
TNFSF13-201ENST00000338784 IGKV2-29A2NJV5 120 aaPredicted RBP10.9□□□□□ -0.66
TNFSF13-201ENST00000338784 FHL3Q13643 280 aa10.9□□□□□ -0.66
TNFSF13-201ENST00000338784 TRBV20-1A0A075B6N2 111 aa10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 A0A1W2PRX2 142 aa10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 AZU1P20160 251 aa10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 MUSTN1Q8IVN3 82 aa10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 C11orf44Q8N8P7 122 aa10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 WFDC11Q8NEX6 87 aa10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 ZNF469Q96JG9 3925 aaPredicted RBP10.89□□□□□ -0.67
TNFSF13-201ENST00000338784 IGHV3OR16-12A0A075B7B8 117 aa10.88□□□□□ -0.67
TNFSF13-201ENST00000338784 TRAV8-3A0A0A6YYJ7 113 aa10.88□□□□□ -0.67
TNFSF13-201ENST00000338784 CCL24O00175 119 aa10.88□□□□□ -0.67
TNFSF13-201ENST00000338784 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
TNFSF13-201ENST00000338784 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.87□□□□□ -0.67
TNFSF13-201ENST00000338784 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms