RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 ZANQ9Y493 2812 aa7.59□□□□□ -1.19
HIF1A-202ENST00000337138 IGHV4-61A0A0C4DH41 118 aa7.59□□□□□ -1.19
HIF1A-202ENST00000337138 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.19
HIF1A-202ENST00000337138 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
HIF1A-202ENST00000337138 C19orf84I3L1E1 186 aa7.59□□□□□ -1.19
HIF1A-202ENST00000337138 VCYO14598 125 aa7.59□□□□□ -1.19
HIF1A-202ENST00000337138 TOMM6Q96B49 74 aa7.59□□□□□ -1.19
HIF1A-202ENST00000337138 SUMO4Q6EEV6 95 aa7.59□□□□□ -1.2
HIF1A-202ENST00000337138 NEXN-AS1Q8NBZ9 246 aa7.59□□□□□ -1.2
HIF1A-202ENST00000337138 TIMM21Q9BVV7 248 aa7.58□□□□□ -1.2
HIF1A-202ENST00000337138 CRIP2P52943 208 aaPredicted RBP7.58□□□□□ -1.2
HIF1A-202ENST00000337138 CIRBPQ14011 172 aaKnown RBP7.58□□□□□ -1.2
HIF1A-202ENST00000337138 CEMP1Q6PRD7 247 aaPredicted RBP7.58□□□□□ -1.2
HIF1A-202ENST00000337138 DAND5Q8N907 189 aa7.58□□□□□ -1.2
HIF1A-202ENST00000337138 CLEC2BQ92478 149 aa7.58□□□□□ -1.2
HIF1A-202ENST00000337138 BBC3Q96PG8 261 aaPredicted RBP7.58□□□□□ -1.2
HIF1A-202ENST00000337138 IGHV3OR16-12A0A075B7B8 117 aa7.58□□□□□ -1.2
HIF1A-202ENST00000337138 SOCS3O14543 225 aa7.58□□□□□ -1.2
HIF1A-202ENST00000337138 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
HIF1A-202ENST00000337138 APRG1Q8IVJ8 170 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 ITLN2Q8WWU7 325 aaPredicted RBP7.57□□□□□ -1.2
HIF1A-202ENST00000337138 IGHV1-69DA0A0B4J2H0 117 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 A0A0J9YXV3 536 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 IGHV1-69P01742 117 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 SYNJ2BPP57105 145 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 GAGE2AQ6NT46 116 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 PIMREGQ9BSJ6 248 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 DNAL4O96015 105 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 P0DMU3 169 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 FAM231AP0DMU4 169 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 FAM231CP0DMU5 169 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 ID1P41134 155 aa7.57□□□□□ -1.2
HIF1A-202ENST00000337138 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
HIF1A-202ENST00000337138 DAZ1Q9NQZ3 744 aaKnown RBP7.56□□□□□ -1.2
HIF1A-202ENST00000337138 ZNF580Q9UK33 172 aa7.56□□□□□ -1.2
HIF1A-202ENST00000337138 A0A0J9YY99 117 aa7.56□□□□□ -1.2
HIF1A-202ENST00000337138 CRLF1O75462 422 aa7.56□□□□□ -1.2
HIF1A-202ENST00000337138 Q96MF0 132 aa7.56□□□□□ -1.2
HIF1A-202ENST00000337138 TRAV12-1A0A0B4J245 112 aa7.56□□□□□ -1.2
HIF1A-202ENST00000337138 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
HIF1A-202ENST00000337138 GCN1Q92616 2671 aaKnown RBP7.55□□□□□ -1.2
HIF1A-202ENST00000337138 IGHV3-38A0A0C4DH36 116 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 FAM223BA6NKX1 122 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 NDUFA4O00483 81 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 FAM223AQ8IWN6 122 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 TSPEAR-AS2P59090 65 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 TOMM7Q9P0U1 55 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 NDUFA12Q9UI09 145 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 PRO0461Q9UI25 63 aa7.55□□□□□ -1.2
HIF1A-202ENST00000337138 OR13C6PQ8NH95 151 aa7.54□□□□□ -1.2
HIF1A-202ENST00000337138 BRI3O95415 125 aa7.54□□□□□ -1.2
HIF1A-202ENST00000337138 PROK1P58294 105 aa7.54□□□□□ -1.2
HIF1A-202ENST00000337138 DEFB136Q30KP8 78 aa7.54□□□□□ -1.2
HIF1A-202ENST00000337138 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 A8MZ25 164 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 ZNRF2Q8NHG8 242 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 IGHV4-59P01825 116 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 SNRPD3P62318 126 aaKnown RBP7.53□□□□□ -1.2
HIF1A-202ENST00000337138 MRPL53Q96EL3 112 aaKnown RBP7.53□□□□□ -1.2
HIF1A-202ENST00000337138 IGHV4-30-2A0A087WSY4 118 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 RHODO00212 210 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 CRYGDP07320 174 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 HIST1H4AP62805 103 aaKnown RBP7.53□□□□□ -1.2
HIF1A-202ENST00000337138 FHL3Q13643 280 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 PRORYQ9H606 182 aa7.53□□□□□ -1.2
HIF1A-202ENST00000337138 TSHBP01222 138 aa7.52□□□□□ -1.21
HIF1A-202ENST00000337138 PLA2G2AP14555 144 aa7.52□□□□□ -1.21
HIF1A-202ENST00000337138 LINC00315P59091 139 aa7.52□□□□□ -1.21
HIF1A-202ENST00000337138 TRAV13-1A0A0B4J241 112 aa7.52□□□□□ -1.21
HIF1A-202ENST00000337138 ANKRD17O75179 2603 aaKnown RBP7.52□□□□□ -1.21
HIF1A-202ENST00000337138 A0A1W2PRX2 142 aa7.51□□□□□ -1.21
HIF1A-202ENST00000337138 TMEM141Q96I45 108 aa7.51□□□□□ -1.21
HIF1A-202ENST00000337138 ICOSQ9Y6W8 199 aa7.51□□□□□ -1.21
HIF1A-202ENST00000337138 TRBV10-2A0A0K0K1G8 114 aa7.51□□□□□ -1.21
HIF1A-202ENST00000337138 IGHV3-33P01772 117 aa7.51□□□□□ -1.21
HIF1A-202ENST00000337138 SLC25A29Q8N8R3 303 aa7.51□□□□□ -1.21
HIF1A-202ENST00000337138 KIF25-AS1Q9Y6Z4 181 aa7.51□□□□□ -1.21
HIF1A-202ENST00000337138 IGLV4-69A0A075B6H9 119 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 NXPH4O95158 308 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
HIF1A-202ENST00000337138 UBE2D1P51668 147 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 USMG5Q96IX5 58 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 TRIAP1O43715 76 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 IGHV3-30P01768 117 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 IGHV3-30-5P0DP03 117 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 Q6ZSV7 163 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
HIF1A-202ENST00000337138 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
HIF1A-202ENST00000337138 AVPP01185 164 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 LENEPQ9Y5L5 61 aa7.5□□□□□ -1.21
HIF1A-202ENST00000337138 LINC01619G3V211 115 aa7.49□□□□□ -1.21
HIF1A-202ENST00000337138 DEFB131AP59861 70 aa7.49□□□□□ -1.21
HIF1A-202ENST00000337138 DEFB121Q5J5C9 76 aa7.49□□□□□ -1.21
HIF1A-202ENST00000337138 Q9UF83 564 aa7.49□□□□□ -1.21
HIF1A-202ENST00000337138 IGHV3-53P01767 116 aa7.49□□□□□ -1.21
HIF1A-202ENST00000337138 UBE2D3P61077 147 aa7.49□□□□□ -1.21
HIF1A-202ENST00000337138 UBE2D2P62837 147 aa7.49□□□□□ -1.21
HIF1A-202ENST00000337138 IGHV1OR15-1A0A075B7D0 117 aa7.48□□□□□ -1.21
HIF1A-202ENST00000337138 M0QXV9 152 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms