RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 MRPS16Q9Y3D3 137 aaKnown RBP12□□□□□ -0.49
CHGA-202ENST00000334654 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
CHGA-202ENST00000334654 LELP1Q5T871 98 aa11.99□□□□□ -0.49
CHGA-202ENST00000334654 BAGE3Q86Y29 109 aa11.99□□□□□ -0.49
CHGA-202ENST00000334654 TRBV6-8A0A0A6YYG3 113 aa11.98□□□□□ -0.49
CHGA-202ENST00000334654 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
CHGA-202ENST00000334654 ALMS1Q8TCU4 4167 aa11.97□□□□□ -0.49
CHGA-202ENST00000334654 I3L3M4 83 aa11.97□□□□□ -0.49
CHGA-202ENST00000334654 VCYO14598 125 aa11.97□□□□□ -0.49
CHGA-202ENST00000334654 TSHBP01222 138 aa11.97□□□□□ -0.49
CHGA-202ENST00000334654 PMCHP20382 165 aa11.97□□□□□ -0.49
CHGA-202ENST00000334654 C18orf32Q8TCD1 76 aa11.97□□□□□ -0.49
CHGA-202ENST00000334654 LINC00476Q8WZB0 136 aa11.97□□□□□ -0.49
CHGA-202ENST00000334654 UPK3BQ9BT76 320 aa11.97□□□□□ -0.49
CHGA-202ENST00000334654 DNAH1Q9P2D7 4330 aa11.96□□□□□ -0.49
CHGA-202ENST00000334654 S100A2P29034 98 aa11.96□□□□□ -0.49
CHGA-202ENST00000334654 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.49
CHGA-202ENST00000334654 COTL1Q14019 142 aa11.95□□□□□ -0.5
CHGA-202ENST00000334654 IQCJQ1A5X6 159 aa11.95□□□□□ -0.5
CHGA-202ENST00000334654 TMEM97Q5BJF2 176 aa11.95□□□□□ -0.5
CHGA-202ENST00000334654 LOC389332A0A1B0GUA5 103 aa11.95□□□□□ -0.5
CHGA-202ENST00000334654 WFDC10BQ8IUB3 73 aa11.95□□□□□ -0.5
CHGA-202ENST00000334654 TMEM18Q96B42 140 aa11.95□□□□□ -0.5
CHGA-202ENST00000334654 CHCHD1Q96BP2 118 aaKnown RBP11.95□□□□□ -0.5
CHGA-202ENST00000334654 MAP1LC3AQ9H492 121 aa11.95□□□□□ -0.5
CHGA-202ENST00000334654 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
CHGA-202ENST00000334654 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
CHGA-202ENST00000334654 IGHV1-24A0A0C4DH33 117 aa11.93□□□□□ -0.5
CHGA-202ENST00000334654 LY6G6CO95867 125 aa11.93□□□□□ -0.5
CHGA-202ENST00000334654 IFI27P40305 119 aaPredicted RBP11.93□□□□□ -0.5
CHGA-202ENST00000334654 Q8N8P6 123 aa11.93□□□□□ -0.5
CHGA-202ENST00000334654 TRBV25-1A0A075B6N4 114 aa11.92□□□□□ -0.5
CHGA-202ENST00000334654 TCAPO15273 167 aa11.92□□□□□ -0.5
CHGA-202ENST00000334654 LINC00614P0C842 121 aa11.92□□□□□ -0.5
CHGA-202ENST00000334654 KIR2DL4Q99706 377 aa11.92□□□□□ -0.5
CHGA-202ENST00000334654 Q9H8V8 135 aa11.92□□□□□ -0.5
CHGA-202ENST00000334654 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
CHGA-202ENST00000334654 SERF1AO75920 110 aa11.91□□□□□ -0.5
CHGA-202ENST00000334654 AMTP48728 403 aa11.91□□□□□ -0.5
CHGA-202ENST00000334654 URB1-AS1Q96HZ7 61 aa11.91□□□□□ -0.5
CHGA-202ENST00000334654 LCE6AA0A183 80 aa11.9□□□□□ -0.5
CHGA-202ENST00000334654 SIVA1O15304 175 aa11.9□□□□□ -0.5
CHGA-202ENST00000334654 KMT2AQ03164 3969 aa11.9□□□□□ -0.5
CHGA-202ENST00000334654 NIT1Q86X76 327 aa11.9□□□□□ -0.5
CHGA-202ENST00000334654 Q8N3U1 123 aa11.9□□□□□ -0.5
CHGA-202ENST00000334654 NXT2Q9NPJ8 142 aaKnown RBP11.9□□□□□ -0.5
CHGA-202ENST00000334654 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 K7EMI3 77 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 DNAH10OSP0CZ25 163 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 PRSS3P2Q8NHM4 247 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 TMEM243Q9BU79 118 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 KMT2CQ8NEZ4 4911 aaKnown RBP11.89□□□□□ -0.51
CHGA-202ENST00000334654 HSBP1O75506 76 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 FCER1GP30273 86 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 HIST1H2BLQ99880 126 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 CHCHD5Q9BSY4 110 aa11.89□□□□□ -0.51
CHGA-202ENST00000334654 LINC01556Q5JQF7 62 aa11.88□□□□□ -0.51
CHGA-202ENST00000334654 SACSQ9NZJ4 4579 aa11.87□□□□□ -0.51
CHGA-202ENST00000334654 DNAH6Q9C0G6 4158 aa11.87□□□□□ -0.51
CHGA-202ENST00000334654 HYDINQ4G0P3 5121 aa11.87□□□□□ -0.51
CHGA-202ENST00000334654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.87□□□□□ -0.51
CHGA-202ENST00000334654 IGKV2-29A2NJV5 120 aaPredicted RBP11.87□□□□□ -0.51
CHGA-202ENST00000334654 LINC00310P59036 64 aa11.87□□□□□ -0.51
CHGA-202ENST00000334654 GAGE6Q13070 117 aa11.87□□□□□ -0.51
CHGA-202ENST00000334654 AP5S1Q9NUS5 200 aa11.87□□□□□ -0.51
CHGA-202ENST00000334654 IFITM10A6NMD0 228 aa11.86□□□□□ -0.51
CHGA-202ENST00000334654 MPV17L2Q567V2 206 aa11.86□□□□□ -0.51
CHGA-202ENST00000334654 FA2HQ7L5A8 372 aa11.86□□□□□ -0.51
CHGA-202ENST00000334654 C20orf203Q8NBC4 194 aa11.86□□□□□ -0.51
CHGA-202ENST00000334654 KRTAP1-5Q9BYS1 174 aa11.86□□□□□ -0.51
CHGA-202ENST00000334654 NUPR1O60356 82 aa11.85□□□□□ -0.51
CHGA-202ENST00000334654 FABP4P15090 132 aa11.85□□□□□ -0.51
CHGA-202ENST00000334654 LAGE3Q14657 143 aa11.85□□□□□ -0.51
CHGA-202ENST00000334654 H7C423 109 aa11.84□□□□□ -0.51
CHGA-202ENST00000334654 IGHV3-30P01768 117 aa11.84□□□□□ -0.51
CHGA-202ENST00000334654 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
CHGA-202ENST00000334654 IGHV3-30-3P0DP02 117 aa11.84□□□□□ -0.51
CHGA-202ENST00000334654 IGHV3-30-5P0DP03 117 aa11.84□□□□□ -0.51
CHGA-202ENST00000334654 AKR1D1P51857 326 aa11.84□□□□□ -0.51
CHGA-202ENST00000334654 RBX1P62877 108 aa11.84□□□□□ -0.51
CHGA-202ENST00000334654 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
CHGA-202ENST00000334654 Q8N976 141 aa11.84□□□□□ -0.51
CHGA-202ENST00000334654 A0A1B0GUV1 79 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 TMEM262E9PQX1 116 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 G0S2P27469 103 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 PDZD11Q5EBL8 140 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 RNASEKQ6P5S7 137 aaKnown RBP11.83□□□□□ -0.52
CHGA-202ENST00000334654 IGLV4-60A0A075B6I1 120 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 NBDYA0A0U1RRE5 68 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 FGF6P10767 208 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 ORMDL2Q53FV1 153 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 Q6ZR54 194 aa11.83□□□□□ -0.52
CHGA-202ENST00000334654 MRPL52Q86TS9 123 aaKnown RBP11.83□□□□□ -0.52
CHGA-202ENST00000334654 A0A087WX48 190 aa11.82□□□□□ -0.52
CHGA-202ENST00000334654 LINC01549A6NIU2 74 aa11.82□□□□□ -0.52
CHGA-202ENST00000334654 UBE2L6O14933 153 aa11.82□□□□□ -0.52
CHGA-202ENST00000334654 OR10D4PQ8NGN7 298 aa11.82□□□□□ -0.52
CHGA-202ENST00000334654 FAM104AQ969W3 186 aa11.82□□□□□ -0.52
CHGA-202ENST00000334654 UBE2D4Q9Y2X8 147 aa11.82□□□□□ -0.52
CHGA-202ENST00000334654 A0A096LNJ9 63 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms