RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
SMG1-201ENST00000330588 LYPD6BQ8NI32 183 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 DNAJC30Q96LL9 226 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 CTDSP1Q9GZU7 261 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 LY96Q9Y6Y9 160 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 DNAH6Q9C0G6 4158 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 KMT2AQ03164 3969 aa4.31□□□□□ -1.72
SMG1-201ENST00000330588 IFITM10A6NMD0 228 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 LINC00694P0DN24 101 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 TPT1P13693 172 aaKnown RBP4.3□□□□□ -1.72
SMG1-201ENST00000330588 EVI2AP22794 236 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 SULT1A2P50226 295 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 LINC00315P59091 139 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 UBE2G1P62253 170 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 LINC01620Q4KN68 170 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 LINC01556Q5JQF7 62 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 SUMO4Q6EEV6 95 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 UFSP1Q6NVU6 142 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 TMUB2Q71RG4 321 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 SLC25A29Q8N8R3 303 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 OR11H4Q8NGC9 324 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 PARLQ9H300 379 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 SCRT2Q9NQ03 307 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 MANBALQ9NQG1 85 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 HSPB8Q9UJY1 196 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 ERG28Q9UKR5 140 aa4.3□□□□□ -1.72
SMG1-201ENST00000330588 TRAV8-6A0A0B4J262 113 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 B4DEV8 164 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 PHOX2AO14813 284 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 ESDP10768 282 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 S100A4P26447 101 aaKnown RBP4.29□□□□□ -1.72
SMG1-201ENST00000330588 LAGE3Q14657 143 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 LELP1Q5T871 98 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 CD164L2Q6UWJ8 174 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 OR10D4PQ8NGN7 298 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 OR13C6PQ8NH95 151 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 BAALCQ8WXS3 180 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 ZC2HC1AQ96GY0 325 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 SGK494Q96LW2 274 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 LINC00479Q96M42 142 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 ZNF471Q9BX82 626 aaPredicted RBP4.29□□□□□ -1.72
SMG1-201ENST00000330588 TMEM126AQ9H061 195 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 PPDPFQ9H3Y8 114 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 MSRB1Q9NZV6 116 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 NAT8Q9UHE5 227 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
SMG1-201ENST00000330588 A0A087WWC5 75 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 IGHV3-38A0A0C4DH36 116 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 TRBV10-1A0A0K0K1A3 114 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 C16orf90A8MZG2 172 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 K7EN84 100 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 SH2D1AO60880 128 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 CRIP1P50238 77 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 FAM213BQ8TBF2 198 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 C11orf52Q96A22 123 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 BTF3L4Q96K17 158 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 TM2D2Q9BX73 214 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 GTSF1LQ9H1H1 148 aa4.28□□□□□ -1.72
SMG1-201ENST00000330588 IBA57-AS1B1ANH7 110 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 OR5AL1P0C617 328 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 WFDC10BQ8IUB3 73 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 CBLN2Q8IUK8 224 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 ATP6V0E2Q8NHE4 81 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 CHCHD7Q9BUK0 85 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 SEC11CQ9BY50 192 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 USP17L23D6RBM5 183 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 H3BVH4 76 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 CRYGDP07320 174 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 ARMS2P0C7Q2 107 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 GZMBP10144 247 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 SPATA12Q7Z6I5 190 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 HIST3H2BBQ8N257 126 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 MIEN1Q9BRT3 115 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 PHLDA3Q9Y5J5 127 aa4.27□□□□□ -1.73
SMG1-201ENST00000330588 LOC100131303A0A0U1RQF7 123 aa4.26□□□□□ -1.73
SMG1-201ENST00000330588 VPREB1P12018 145 aa4.26□□□□□ -1.73
SMG1-201ENST00000330588 RAB5AP20339 215 aa4.26□□□□□ -1.73
SMG1-201ENST00000330588 IQCJQ1A5X6 159 aa4.26□□□□□ -1.73
SMG1-201ENST00000330588 BAGE2Q86Y30 109 aa4.26□□□□□ -1.73
SMG1-201ENST00000330588 OR10G8Q8NGN5 311 aa4.26□□□□□ -1.73
SMG1-201ENST00000330588 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
SMG1-201ENST00000330588 A0A087WTM6 91 aa4.25□□□□□ -1.73
SMG1-201ENST00000330588 AMTP48728 403 aa4.25□□□□□ -1.73
SMG1-201ENST00000330588 RPS28P62857 69 aaKnown RBP4.25□□□□□ -1.73
SMG1-201ENST00000330588 OR10J3Q5JRS4 329 aa4.25□□□□□ -1.73
SMG1-201ENST00000330588 MAP1LC3AQ9H492 121 aa4.25□□□□□ -1.73
SMG1-201ENST00000330588 NAT8BQ9UHF3 227 aa4.25□□□□□ -1.73
SMG1-201ENST00000330588 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
SMG1-201ENST00000330588 TRAV8-3A0A0A6YYJ7 113 aa4.24□□□□□ -1.73
SMG1-201ENST00000330588 A0A1B0GX51 115 aa4.24□□□□□ -1.73
SMG1-201ENST00000330588 GNG4P50150 75 aa4.24□□□□□ -1.73
SMG1-201ENST00000330588 CCL20P78556 96 aa4.24□□□□□ -1.73
SMG1-201ENST00000330588 RPL36AP83881 106 aaKnown RBP4.24□□□□□ -1.73
SMG1-201ENST00000330588 MEF2BQ02080 365 aaPredicted RBP4.24□□□□□ -1.73
SMG1-201ENST00000330588 SMAGPQ0VAQ4 97 aa4.24□□□□□ -1.73
SMG1-201ENST00000330588 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
SMG1-201ENST00000330588 RPL36ALQ969Q0 106 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms