RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RBMY1EA6NEQ0 496 aaKnown RBP10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 H3BMM0 161 aa10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 PRSS2P07478 247 aa10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 RBMY1DP0C7P1 496 aaKnown RBP10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
ATP2C1-201ENST00000328560 A4D1N5 150 aa10.29□□□□□ -0.76
ATP2C1-201ENST00000328560 GAGE12HA6NDE8 117 aa10.29□□□□□ -0.76
ATP2C1-201ENST00000328560 RHODO00212 210 aa10.29□□□□□ -0.76
ATP2C1-201ENST00000328560 SHISA2Q6UWI4 295 aa10.29□□□□□ -0.76
ATP2C1-201ENST00000328560 TEX29Q8N6K0 151 aa10.29□□□□□ -0.76
ATP2C1-201ENST00000328560 PRO0461Q9UI25 63 aa10.29□□□□□ -0.76
ATP2C1-201ENST00000328560 TRAV8-3A0A0A6YYJ7 113 aa10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 AZU1P20160 251 aa10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 Q6ZSN1 163 aa10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 LRRC75A-AS1Q8N1F1 130 aa10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 Q1RN00 199 aa10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 XCL2Q9UBD3 114 aa10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 JMJD1CQ15652 2540 aa10.28□□□□□ -0.76
ATP2C1-201ENST00000328560 LEPROTO15243 131 aa10.27□□□□□ -0.76
ATP2C1-201ENST00000328560 NFE4Q86UQ8 179 aa10.27□□□□□ -0.76
ATP2C1-201ENST00000328560 SIGMAR1Q99720 223 aa10.27□□□□□ -0.76
ATP2C1-201ENST00000328560 CHD6Q8TD26 2715 aa10.27□□□□□ -0.76
ATP2C1-201ENST00000328560 NPC2P61916 151 aa10.27□□□□□ -0.77
ATP2C1-201ENST00000328560 AMELXQ99217 191 aa10.27□□□□□ -0.77
ATP2C1-201ENST00000328560 PRO1854Q9UHT4 67 aa10.27□□□□□ -0.77
ATP2C1-201ENST00000328560 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.77
ATP2C1-201ENST00000328560 A8MZ25 164 aa10.26□□□□□ -0.77
ATP2C1-201ENST00000328560 M0R2P5 195 aa10.26□□□□□ -0.77
ATP2C1-201ENST00000328560 TCL1BO95988 128 aa10.26□□□□□ -0.77
ATP2C1-201ENST00000328560 SMCPP49901 116 aaPredicted RBP10.26□□□□□ -0.77
ATP2C1-201ENST00000328560 C10orf126Q8N4M7 172 aa10.26□□□□□ -0.77
ATP2C1-201ENST00000328560 ZNF415Q09FC8 603 aa10.26□□□□□ -0.77
ATP2C1-201ENST00000328560 TIMM21Q9BVV7 248 aa10.26□□□□□ -0.77
ATP2C1-201ENST00000328560 MAP6D1Q9H9H5 199 aa10.25□□□□□ -0.77
ATP2C1-201ENST00000328560 LYRM7Q5U5X0 104 aa10.25□□□□□ -0.77
ATP2C1-201ENST00000328560 CFAP126Q5VTH2 177 aa10.25□□□□□ -0.77
ATP2C1-201ENST00000328560 A8MWV9 139 aa10.24□□□□□ -0.77
ATP2C1-201ENST00000328560 IGHV3-30-3P0DP02 117 aa10.24□□□□□ -0.77
ATP2C1-201ENST00000328560 MTORP42345 2549 aa10.24□□□□□ -0.77
ATP2C1-201ENST00000328560 ACANP16112 2415 aa10.24□□□□□ -0.77
ATP2C1-201ENST00000328560 FSHBP01225 129 aa10.24□□□□□ -0.77
ATP2C1-201ENST00000328560 SPINK8P0C7L1 97 aa10.24□□□□□ -0.77
ATP2C1-201ENST00000328560 NF1P21359 2839 aa10.24□□□□□ -0.77
ATP2C1-201ENST00000328560 UBE2D3P61077 147 aa10.23□□□□□ -0.77
ATP2C1-201ENST00000328560 UBE2D2P62837 147 aa10.23□□□□□ -0.77
ATP2C1-201ENST00000328560 IGHV3-53P01767 116 aa10.23□□□□□ -0.77
ATP2C1-201ENST00000328560 DGAT2L7PQ6IED9 249 aa10.23□□□□□ -0.77
ATP2C1-201ENST00000328560 WFDC11Q8NEX6 87 aa10.23□□□□□ -0.77
ATP2C1-201ENST00000328560 C4orf3Q8WVX3 66 aa10.23□□□□□ -0.77
ATP2C1-201ENST00000328560 ERG28Q9UKR5 140 aa10.23□□□□□ -0.77
ATP2C1-201ENST00000328560 FOXI1Q12951 378 aa10.22□□□□□ -0.77
ATP2C1-201ENST00000328560 A0A0J9YXY3 114 aa10.22□□□□□ -0.77
ATP2C1-201ENST00000328560 Q6ZUT4 128 aa10.22□□□□□ -0.77
ATP2C1-201ENST00000328560 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
ATP2C1-201ENST00000328560 C1QTNF4Q9BXJ3 329 aa10.22□□□□□ -0.77
ATP2C1-201ENST00000328560 GEMIN7Q9H840 131 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-201ENST00000328560 DEFB114Q30KQ6 69 aa10.21□□□□□ -0.77
ATP2C1-201ENST00000328560 YAE1D1Q9NRH1 226 aa10.21□□□□□ -0.77
ATP2C1-201ENST00000328560 INSP01308 110 aa10.21□□□□□ -0.78
ATP2C1-201ENST00000328560 STHQ8IWL8 128 aa10.21□□□□□ -0.78
ATP2C1-201ENST00000328560 RNF152Q8N8N0 203 aa10.21□□□□□ -0.78
ATP2C1-201ENST00000328560 NDUFA12Q9UI09 145 aa10.21□□□□□ -0.78
ATP2C1-201ENST00000328560 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
ATP2C1-201ENST00000328560 C9JAW5 83 aa10.2□□□□□ -0.78
ATP2C1-201ENST00000328560 A0A0U1RRA0 63 aa10.2□□□□□ -0.78
ATP2C1-201ENST00000328560 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
ATP2C1-201ENST00000328560 Q6ZSV7 163 aa10.2□□□□□ -0.78
ATP2C1-201ENST00000328560 IGHV3-33P01772 117 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 HIST2H2BCQ6DN03 193 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 CHCHD7Q9BUK0 85 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 DAND5Q8N907 189 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 CR1P17927 2039 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 TRBV20-1A0A075B6N2 111 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 CRYBA4P53673 196 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 PYGO1Q9Y3Y4 419 aa10.19□□□□□ -0.78
ATP2C1-201ENST00000328560 DNAJC9-AS1A6NH13 148 aa10.18□□□□□ -0.78
ATP2C1-201ENST00000328560 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
ATP2C1-201ENST00000328560 TMEM86BQ8N661 226 aa10.18□□□□□ -0.78
ATP2C1-201ENST00000328560 UBE2D4Q9Y2X8 147 aa10.18□□□□□ -0.78
ATP2C1-201ENST00000328560 TMEM263Q8WUH6 116 aaKnown RBP10.18□□□□□ -0.78
ATP2C1-201ENST00000328560 ZNF625Q96I27 306 aaPredicted RBP10.18□□□□□ -0.78
ATP2C1-201ENST00000328560 ADAMTSL4-AS1Q5T5F5 129 aa10.17□□□□□ -0.78
ATP2C1-201ENST00000328560 Q8N2B8 174 aa10.17□□□□□ -0.78
ATP2C1-201ENST00000328560 C11orf72Q8NBR9 251 aa10.17□□□□□ -0.78
ATP2C1-201ENST00000328560 ITPR3Q14573 2671 aa10.17□□□□□ -0.78
ATP2C1-201ENST00000328560 IGHV1-58A0A0C4DH39 117 aa10.17□□□□□ -0.78
ATP2C1-201ENST00000328560 FLNAP21333 2647 aaKnown RBP10.17□□□□□ -0.78
ATP2C1-201ENST00000328560 CCL24O00175 119 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 ODF3L2Q3SX64 289 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 ANKRD29Q8N6D5 301 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 CARD19Q96LW7 228 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms